Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Mogil, J. S., Pang, D. S. J., Silva Dutra, G. G. et al. 2020. The development and use of facial grimace scales for pain measurement in animals. Neuroscience & Biobehavioral Reviews 116, 480-496.

The measurement of pain in animals is surprisingly complex, and remains a critical issue in veterinary care and biomedical research. Based on the known utility of pain measurement via facial expression in verbal and especially...

Kravchuk, L., Watson, C. 2020. Corn snakes can behaviorally enhance crypsis by choosing complex backgrounds and substrate. Animal Behavior and Cognition 7(1), 39–48.

Many organisms have evolved coloration that increases their likelihood of survival. Crypsis is one such mechanism employed by many animals to avoid detection by blending into their habitat. By remaining unseen, these animals can enhance...

Spain, M., Fuller, G., Allard, S. 2020. Effects of habitat modifications on behavioral indicators of welfare for Madagascar giant hognose snakes (Leioheterodon madagascariensis). Animal Behavior and Cognition 7(1), 70–81.

Although historically understudied, the empirical evaluation of captive reptile welfare is becoming more common, and zoos continue making modifications to their reptile facilities with the goal of improving welfare. In this study, we evaluated the...

Ellis, T., Rimmer, G. S. E., Parker, S.-J. et al. 2019. In-tank underwater cameras can refine monitoring of laboratory fish. Animal Welfare 28(2), 191-203.

Laboratory animals need to be monitored to check the status of their health and welfare. Routine checks of laboratory fish are limited to visual observations of physical appearance and behaviour, but for species held in...

Benn, A. L., McLelland, D. J., Whittaker, A. L. 2019. A review of welfare assessment methods in reptiles, and preliminary application of the Welfare Quality® protocol to the pygmy blue-tongue skink, Tiliqua adelaidensis, using animal-based measures. Animals 9(1), 27.

Reptiles are held at wildlife parks and zoos for display and conservation breeding programs and are increasingly being kept as pets. Reliable indicators of welfare for reptiles need to be identified. Current guidelines for the...

Makowska, I. J., Franks, B., El-Hinn, C. et al. 2019. Standard laboratory housing for mice restricts their ability to segregate space into clean and dirty areas. Scientific Reports 9, 6179.

Laboratory mice (Mus musculus) are typically housed in simple cages consisting of one open space. These standard cages may thwart mouse ability to segregate resting areas from areas where they eliminate, a behaviour that is...

Fehlhaber, B., Heinemann, A. S., Rübensam, K. et al. 2019. A sensitive scoring system for the longitudinal clinical evaluation and prediction of lethal disease outcomes in newborn mice. Scientific Reports 9, 5919.

Neonatal animal models are increasingly employed in order to unravel age-specific disease mechanisms. Appropriate tools objectifying the clinical condition of murine neonates are lacking. In this study, we tested a scoring system specifically designed for...

Cho, C., Michalidis, V., Lecker, I. et al. 2019. Evaluating analgesic efficacy and administration route following craniotomy in mice using the grimace scale. Scientific Reports 9, 359.

Most research laboratories abide by guidelines and mandates set by their research institution regarding the administration of analgesics to control pain during the postoperative period. Unfortunately, measuring pain originating from the head is difficult, making...

Howell, C. P., Cheyne, S. M. 2019. Complexities of using wild versus captive activity budget comparisons for assessing captive primate welfare. Journal of Applied Animal Welfare Science 22(1), 78-96.

Activity budget comparisons between groups or individuals in the wild and those in captivity are commonly used to determine the range of wild-type behaviors that nonhuman animals in captivity perform. These comparisons are conducted with...

Arechavala-Lopez, P., Saraiva, J. L. 2019. Welfare of Cultured and Experimental Fishes. Basel, Switzerland: MDPI, 132 pages.

This open access book is a printed edition of the Special Issue on Welfare of Cultured and Experimental Fishes that was published in the journal Fishes. The PDF is free for download.

Fife-Cook, I., Franks, B. 2019. Positive welfare for fishes: Rationale and areas for future study. Fishes 4(2), 31.

Traditional animal welfare paradigms have focused on maintaining physical health and mitigating negative impacts to wellbeing. Recently, however, the field has increasingly recognized the importance of positive welfare (i.e., mental and physical states that exceed...

Saraiva, J. L., Arechavala-Lopez, P., Castanheira, M. F. et al. 2019. A global assessment of welfare in farmed fishes: The FishEthoBase. Fishes 4(2), 30.

Fish welfare is an essential issue that needs to be tackled by the aquaculture industry. In order to address it, studies have been limited to a small number of species and the information is generally...

Borgmans, G., Palme, R., Sannen, A. et al. 2019. The effect of cage size on stress levels in captive green anole (Anolis carolinensis). Animal Welfare 28(4), 455-464.

Reptiles are often used as model species in scientific research and are popular in the pet trade, yet how they cope with captive conditions has not been well studied. Stress caused by captivity could affect...

Windschnurer, I., Waiblinger, S., Hanslik, S. et al. 2019. Effects of ground floor type on selected health-parameters and weight of rabbits reared in group pens. Animals 9(5), 216.

Cage housing of growing rabbits is associated with welfare concerns. An alternative system that has already been introduced involves pens with non-wire floors. An important aspect of group pens, for which the best solution has...

Masthoff, T., Hoy, S. 2019. Investigations on the influence of floor design on dirtiness and foot pad lesions in growing rabbits. Animals 9(6), 354.

In Germany, an animal welfare ordinance for the housing of rabbits was issued which did not take into account the current investigations on floor design. The aim of the investigations was to study the effects...

Dal Bosco, A., Mugnai, C., Martino, M. et al. 2019. Housing rabbit does in a combi system with removable walls: Effect on behaviour and reproductive performance. Animals 9(8), 528.

We evaluated the effects of two types of colony cages, in which rabbit does were always in a group (C1), and where they were in combi cages furnished with removable internal walls to allow both...

Rauterberg, S. L., Bill, J., Kimm, S. 2019. Effect of a new housing system on skin lesions, performance and soiling of fattening rabbits: A German case study. Animals 9(9), 650.

The aim of the present study was to develop and evaluate a new housing system for fattening rabbits. Data were collected on a farm with rabbits housed either under new conditions (NC) or established (conventional)...

Dench, J., McLaren-Jones, R., Vancollie, V. et al. 2019. Optimising health & welfare tracking using the Sanger Mouse Database. Animal Technology and Welfare 18(1), 62-64.

Health tracking of animals is required legally under the Animals (Scientific Procedures) Act 1986 (ASPA) to prevent pain, avoidable suffering, distress or lasting harm. This is important with Genetically Modified (GM) animals as they are...

Stevens, C., Hawkins, P., Lovell-Badge, R. et al. 2019. Report of the 2018 RSPCA/UFAW Rodent and Rabbit Welfare Group meeting. Animal Technology and Welfare 18(2), 81-91.

The RSPCA/UFAW Rodent (and now Rabbit) Working Group has held a one-day meeting every autumn for the last 25 years, so that its members can discuss current welfare research, exchange views on welfare issues and...

King, J. 2019. Team awesome: Why we can be proud. Animal Technology and Welfare 18(2), 127-131.

The presentation I gave at IAT Congress 2019 was based on the changes and refinements the University of Dundee, Medical School Resource Unit (MSRU) has made over the past 18 months. These changes, described in...

Gurney, L. 2019. In-vivo imaging at NIBSC and how we use it to promote the 3Rs. Animal Technology and Welfare 18(2), 143-144. (IAT Congress 2018 Poster Presentation)

In-vivo imaging is a revolutionary technology offering a powerful tool for constructing studies involving mice. In the Biological Services Department (BSD) at NIBSC, the IVIS® Spectrum In Vivo System model is used to perform our...

Baeckens, S., De Meester, W., Tadić, Z. et al. 2019. Where to do number two: Lizards prefer to defecate on the largest rock in the territory. Behavioural Processes 167, 103937.

Many animals use their excrements to communicate with others. In order to increase signal efficacy, animals often behaviourally select for specific defecation sites that maximize the detectability of their faecal deposits, such as the tip...

Bellin, M. A., Reitnauer, K. J., Gomez, A. M. et al. 2019. Evaluation of a synthetic bedding substrate for mice (Mus musculus). JAALAS 58(2), 154-159.

This study compared a synthetic bedding substrate (SBS), which has the potential to be a particulate-free animal bedding system, with the standard woodchip bedding. The objective was to demonstrate that the SBS is habitable for...

Chatigny, F. 2019. The controversy on fish pain: A veterinarian’s perspective. Journal of Applied Animal Welfare Science 22(4), 400-410.

Fish welfare is still a relatively new field. As such, regulations and protocols to ensure fish welfare are currently limited and vary considerably in different jurisdictions. This is in part because of the ongoing controversy...

Warwick, C., Arena, P., Steedman, C. 2019. Spatial considerations for captive snakes. Journal of Veterinary Behavior 30, 37-48.

Captive environments for snakes commonly involve small enclosures with dimensions that prevent occupants from adopting straight line body postures. In particular, the commercial, hobby, and pet sectors routinely utilize small vivaria and racking systems, although...