Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Vanderzwalmen, M., Sánchez Lacalle, D., Tamilselvan, P. et al. 2022. The effect of substrate on water quality in ornamental fish tanks. Animals 12(19), 2679.

Almost all home aquaria contain substrate, either as intentional enrichment or for aesthetic purposes. For fishes, benefits of structural enrichment have been well considered, particularly in research and aquaculture settings. However, our understanding of the...

Brando, S., Coe, J. 2022. Confronting back-of-house traditions: Primates as a case study. Journal of Zoological and Botanical Gardens 3(3), 366–397.

This review commentary focuses on traditional management practices and facility design with suggested improvements in non-public primate management areas, often called “back-of-house”, (henceforth BOH) in zoos, sanctuaries, and research facilities. Progress has been made toward...

Fieschi-Méric, L., Ellis, C., Servini, F. et al. 2022. An improvement in enclosure design can positively impact welfare, reduce aggressiveness and stabilise hierarchy in captive Galapagos giant tortoises. Journal of Zoological and Botanical Gardens 3(4), 499–512.

The interest in the welfare of zoo animals, from both the public and the scientific community, has long been biased towards mammals. However, growing evidence of the complex behavioural repertoires of less charismatic animals, such...

Ramos, J., Balasch, J. C., Tort, L. 2021. About welfare and stress in the early stages of fish. Frontiers in Veterinary Science 8, 634434.

In conclusion, the investigations carried out up to now demonstrate that during the early stages fish show high sensitivity to many types of stressors involving an array of responses to overcome alterations that could affect...

Corbani, T. L., Martin, J. E., Healy, S. D. 2021. The impact of acute loud noise on the behavior of laboratory birds. Frontiers in Veterinary Science 7, 607632.

Husbandry procedures and facility settings, such as low-frequency fire alarms, can produce noises in a laboratory environment that cause stress to animals used in research. However, most of the data demonstrating harmful effects that have...

Nonnis, S., Angiulli, E., Maffioli, E. et al. 2021. Acute environmental temperature variation affects brain protein expression, anxiety and explorative behaviour in adult zebrafish. Scientific Reports 11(1), 2521.

This study investigated the effect of 4-d acute thermal treatments at 18 °C, 26 °C (control) and 34 °C on the nervous system of adult zebrafish (Danio rerio) using a multidisciplinary approach based on behavioural...

Lasky, M., Campbell, J., Osborne, J. A. et al. 2021. Increasing browse and social complexity can improve zoo elephant welfare. Zoo Biology 40(1), 9–19.

While recent work has assessed how environmental and managerial changes influence elephant welfare across multiple zoos, few studies have addressed the effects of management changes within a single institution. In this paper, we examine how...

Coleman, K., Shapiro, S. J. (Eds.). 2021. Behavioral Biology of Laboratory Animals (1st ed). CRC Press, Boca Raton, FL.

This 30-chapter volume informs students and professionals about the behavioral biology of animals commonly housed in laboratory and other captive settings. Each species evolved under specific environmental conditions, resulting in unique behavioral patterns, many of...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Martinic, G. 2021. Husbandry and healthcare of the Olive python (Liasis olivaceus). Animal Technology and Welfare 20(1), 44-50.

The article describes the care of the Olive python (Liasis olivaceus) including information on housing, feeding, handling, as well as the general health care of these animals. Some of the information presented is derived from...

Sailer, L. M., Holinger, M., Burla, J.-B. et al. 2021. Influence of housing and management on claw health in Swiss dairy goats. Animals 11(7), 1873.

Due to a rising demand for goat milk and goat milk products worldwide, it is likely that dairy goat production will be intensified in the future, with larger herds per farm. In Switzerland, as in...

FELASA Working Group on Farm Animals: Berset, C. M., Caristo, M. E., Ferrara, F. et al. 2021. Federation of European Laboratory Animal Science Associations recommendations of best practices for the health management of ruminants and pigs used for scientific and educational purposes. Laboratory Animals 55(2), 117-128.

Most ruminants and pigs used for scientific and educational aims are bred not for these purposes but in a farm environment. Given the wide range of diseases that these species might have, ensuring that the...

Archer, C. 2021. Zebrafish water quality for laboratory animal technicians. Laboratory Animal Science Professional 9(4) (July/August), 11-13.

Zebrafish are an increasingly popular model organism in many aspects of animal research; however, some aspects of their husbandry needs are quite disparate from that which most lab animal technicians are trained. Possibly the most...

Jewell, D., Muensch, A., Kupronis, R. et al. 2021. Husbandry techniques for a research colony of veiled chameleons (Chamaeleo calyptratus). Laboratory Animal Science Professional 9(4) (July/August), 52-55.

Although most chameleon species can be challenging captives, C. calyptratus have been successfully kept and bred in captivity for over thirty years. Despite their relative familiarity, our challenge is to replicate their preferred habitats in...

Archibald, W., Glynn, C. 2021. Refining cages for social housing of non-human primates on ADME studies. Animal Technology and Welfare 20(2), 172-174.

The assessment and understanding of Absorption, Distribution, Metabolism and Elimination (ADME) for new pharmaceuticals is required in regulatory submissions. Typically, ADME studies are conducted using metabolism cages designed for the single housing of animals to...

Schmidt, T., Ferrara, F., Pobloth, A.-M. et al. 2021. Large farm animals used for research purposes: A survey on purchase, housing and hygiene management. Animals 11(8), 2158.

Background: Farm animals (FAs) are frequently used in biomedical research. Recommendations for the purchase, housing and health monitoring of these animals (sheep, goats, cattle and pigs) are still missing, and many institutes have developed their...

Powell, C., von Keyserlingk, M. A. G., Franks, B. 2021. Tank cleaning temporarily increases stress and decreases affiliative behavior in zebrafish. Applied Animal Behaviour Science 242, 105414.

Small, tropical fish are popular companion animals and constitute a major proportion of the vertebrates used in scientific research, but little is known about how they are affected by routine husbandry practices. Manual tank cleanings...

Toinon, C., Waiblinger, S., Rault, J.-L. 2021. Maternal deprivation affects goat kids’ stress coping behaviour. Physiology & Behavior 239, 113494.

Maternal deprivation early in life has been shown to disrupt neonates’ development. Nevertheless, separating the young animals from their dams soon after birth remains a common practice in dairy farm husbandry. This study investigated the...

Hewitt, L., Small, A. 2021. Welfare of farmed crocodilians: Identification of potential animal-based measures using elicitation of expert opinion. Animals 11(12), 3450.

Animal-based measures are the measure of choice in animal welfare assessment protocols as they can often be applied completely independently to the housing or production system employed. Although there has been a small body of...

Watson, P. 2021. Management of naked mole rats (Heterocephalus glaber) at Chester Zoo. RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 48(3), 24-26.

This species first arrived at Chester Zoo in June 2014 when a colony of 27 animals was imported from Dresden Zoo, Germany. As with any new species our journey with naked mole rats has not...

Costantino, A., Fabrizio, E., Calvet, S. 2021. The role of climate control in monogastric animal farming: The effects on animal welfare, air emissions, productivity, health, and energy use. Applied Sciences 11(20), 9549.

In the last decades, an engineering process has deeply transformed livestock houses by introducing fine-tuned climate control systems to guarantee adequate indoor climate conditions needed to express the maximum genetic potential of animals and to...

Zobel, G., Freeman, H., Watson, T. et al. 2020. Effect of different milk-removal strategies at weaning on feed intake and behavior of goat kids. Journal of Veterinary Behavior 35, 62-68.

Weaning from milk is stressful. We aimed to investigate the effect of three weaning strategies on feed intake and behavior of dairy goat kids. Forty-five, 3-month-old Saanen cross goats were allocated to one of three...

Angiulli, E., Pagliara, V., Cioni, C. et al. 2020. Increase in environmental temperature affects exploratory behaviour, anxiety and social preference in Danio rerio. Scientific Reports 10(1), 5385.

The aim of this work is to investigate the effect of a temperature increase on the behaviour of adult zebrafish (Danio rerio) maintained for 21 days at 34 °C (treatment) and 26 °C (control). The temperatures chosen...

Zemanova, M. A. 2020. Towards more compassionate wildlife research through the 3Rs principles: Moving from invasive to noninvasive methods. Wildlife Biology 2020(1), no page numbers.

Research in ecology and wildlife biology remains crucial for increasing our knowledge and improving species management and conservation in the midst of the current biodiversity crisis. However, obtaining information on population status often involves invasive...

Schiffmann, C., Hård, T., Hjelm, M. et al. 2020. Soft and persistent—The influence of sand-flooring and calves on the resting behavior of a zoo-kept African elephant (Loxodonta africana) group. Zoo Biology 39(1), 56-62.

Caring for all aspects of zoo elephants’ well-being is considered a major challenge. Providing an appropriate flooring substrate to facilitate lying rest presents a meaningful part of a holistic management concept. Investigating the impact of...