Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Watters, J. V., Krebs, B. L. 2019. Assessing and enhancing the welfare of animals with equivocal and reliable cues. Animals 9(9), 680.

The actions of human caretakers strongly influence animals living under human care. Here, we consider how intentional and unintentional signals provided by caretakers can inform our assessment of animals' well-being as well as help to...

Mattiello, S., Battini, M., De Rosa, G. et al. 2019. How can we assess positive welfare in ruminants? Animals 9(10), 758.

Until now, most research has focused on the development of indicators of negative welfare, and relatively few studies provide information on valid, reliable, and feasible indicators addressing positive aspects of animal welfare. However, a lack...

Lawrence, A. B., Vigors, B., Sandøe, P. 2019. What is so positive about positive animal welfare?—A critical review of the literature. Animals 9(10), 783.

It is claimed that positive animal welfare (PAW) developed over the last decade in reaction to animal welfare focusing too much on avoiding negatives. However, it remains unclear what PAW adds to the animal welfare...

Semin, G. R., Scandurra, A., Baragli, P. et al. 2019. Inter- and intra-species communication of emotion: Chemosignals as the neglected medium. Animals 9(11), 887.

Human body odors contain chemosignals that make species-specific communication possible. Interspecies communication studies were conducted on dogs and horses subjected to human chemosignals produced in happiness and fear emotional states. Dogs showed behaviors consistent with...

Tracy, L. M., Temple, S. M., Bennett, D. C. et al. 2019. The reliability and accuracy of palpation, radiography, and sonography for the detection of keel bone damage. Animals 9(11), 894.

Palpation is the most popular method of measuring keel bone damage on live birds, although it has been criticized for being subjective and inaccurate. The goals of this study were to examine intra- and inter-rater...

Hawkins, P., Bertelsen, T. 2019. 3Rs-related and objective indicators to help assess the culture of care. Animals 9(11), 969.

Within animal research and testing, the need for an effective Culture of Care is widely recognized and described in terms of an establishment-wide commitment to improving the implementation of the 3Rs, animal welfare, scientific quality...

McLennan, K. M., Miller, A. L., Dalla Costa, E. et al. 2019. Conceptual and methodological issues relating to pain assessment in mammals: The development and utilisation of pain facial expression scales. Applied Animal Behaviour Science 217, 1-15.

Effective management of pain is critical to the improvement of animal welfare. For this to happen, pain must be recognised and assessed in a variety of contexts. Pain is a complex phenomenon, making reliable, valid...

Moyano Barbosa, H., Gama Nogueira-Filho, S. L., Nogueira de Morais, R. et al. 2019. Non-invasive stress monitoring and temperament of chestnut-bellied seed-finch (Passeriformes, Thraupidae). Applied Animal Behaviour Science 220, 104859.

Songbirds are kept as pets around the world, and bird-singing contests occur in several countries. However, there is a lack of scientific support for songbird welfare and stress monitoring. Thus, we aimed to validate the...

Harris, K., New, R., Smith, P. et al. 2019. Refinement: promoting Gallus Gallus welfare in an experimental poultry unit. Animal Technology and Welfare 18(2), 137-139. (IAT Congress 2018 Poster Presentation)

The poultry team at The Pirbright Institute reviewed existing husbandry practices and trialled several refinement practices. The objective was to provide the birds used in research with an environment which enables them to express their...

Association of Primate Veterinarians. 2019. Association of Primate Veterinarians’ guidelines for nonhuman primate restraint. JAALAS 58(3), 282-284.

The Association of Primate Veterinarians (APV) recognizes that several forms of restraint, including physical and chemical, are necessary for the safe handling of nonhuman primates (NHPs). The following guidelines aim to provide information to researchers...

Newsome, J. T., Clemmons, E. A., Fitzhugh, D. C. et al. 2019. Compassion fatigue, euthanasia stress, and their management in laboratory animal research. JAALAS 58(3), 289-292.

This review is designed to assist both individuals and organizations involved in animal-based research to understand and appreciate the importance and potential risks of compassion fatigue and euthanasia stress. We reviewed current literature regarding compassion...

Chatigny, F. 2019. The controversy on fish pain: A veterinarian’s perspective. Journal of Applied Animal Welfare Science 22(4), 400-410.

Fish welfare is still a relatively new field. As such, regulations and protocols to ensure fish welfare are currently limited and vary considerably in different jurisdictions. This is in part because of the ongoing controversy...

McKenzie, D. J., Sadoul, B., Geffroy, B. 2019. Measuring cortisol, the major stress hormone in fishes. Journal of Fish Biology 94(4), 540-555.

Stress in teleosts is an increasingly studied topic because of its interaction with growth, reproduction, immune system and ultimately fitness of the animal. Whether it is for evaluating welfare in aquaculture, adaptive capacities in fish...

Warwick, C., Arena, P., Steedman, C. 2019. Spatial considerations for captive snakes. Journal of Veterinary Behavior 30, 37-48.

Captive environments for snakes commonly involve small enclosures with dimensions that prevent occupants from adopting straight line body postures. In particular, the commercial, hobby, and pet sectors routinely utilize small vivaria and racking systems, although...

Balansard, I., Cleverley, L., Cutler, K. L. et al. 2019. Revised recommendations for health monitoring of non-human primate colonies (2018): FELASA Working Group Report. Laboratory Animals 53(5), 429–446.

The genetic and biological similarity between non-human primates and humans has ensured the continued use of primates in biomedical research where other species cannot be used. Health-monitoring programmes for non-human primates provide an approach to...

Bertin, A., Mocz, F., Calandreau, L. et al. 2019. Human behaviour at the origin of maternal effects on offspring behaviour in laying hens (Gallus gallus domesticus). Physiology & Behavior 201, 175-183.

Regular visual presence of humans is known to reduce chickens' human-generated stress responses. Here we questioned whether, more than mere visual presence, human behaviour affects laying hen behaviour and subsequently their offspring's behaviour. We hypothesized...

Bracke, M. B. M., Koene, P., Estevez, I. et al. 2019. Broiler welfare trade-off: A semi-quantitative welfare assessment for optimised welfare improvement based on an expert survey. PLOS ONE 14(10), e0222955.

In order to support decision making on how to most effectively improve broiler welfare an innovative expert survey was conducted based on principles derived from semantic modelling. Twenty-seven experts, mainly broiler welfare scientists (n =...

Correia de Lima Almeida Paz, I., Correia de Lima Almeida, I., Milbradt, E. L. et al. 2019. Effects of analgesic and noise stimulus in gait score assessment. PLOS ONE 14(1), e0208827.

This experiment was carried out aiming to assess walking manner and speed of broiler chickens with different gait scores (GS), with or without sound stimulus, and with or without administration of analgesic. To that end...

Kalliokoski, O., Jellestad, F. K., Murison, R. 2019. A systematic review of studies utilizing hair glucocorticoids as a measure of stress suggests the marker is more appropriate for quantifying short-term stressors. Scientific Reports 9, 11997.

Quantitating glucocorticoids (GCs) in hairs is a popular method for assessing chronic stress in studies of humans and animals alike. The cause-and-effect relationship between stress and elevated GC levels in hairs, sampled weeks later, is...

Jung, L., Knierim, U. 2019. Differences between feather pecking and non-feather pecking laying hen flocks regarding their compliance with recommendations for the prevention of feather pecking – A matched concurrent case-control design. Applied Animal Behaviour Science 219, 104839.

Feather pecking (FP) is a multifactorial problem in all housing systems. Using a case-control design we wanted to determine a set of variables which may be decisive for a flock to become case or control...

Broom, D. M., Johnson, K. G. 2019. Stress and Animal Welfare: Key Issues in the Biology of Humans and Other Animals (2nd ed). Springer, Berlin, Germany.

This is the Second Edition of a well-received book that reflects a fresh, integrated coverage of the concepts and scientific measurement of stress and welfare of animals including humans. This book explains the basic biological...

Cox, R. J., Nol, P., Ellis, C. K. et al. 2019. Research with agricultural animals and wildlife. ILAR Journal 60(1), 66-73.

In fiscal year 2016, agricultural animals such as swine, sheep, goats, and cattle represented 10% of the 820 812 animals used in USDA-regulated research. In addition to traditional agricultural animals, research studies using captive wildlife...

Sanchez-Casanova, R., Sarmiento-Franco, L., Segura-Correa, J. et al. 2019. Effects of outdoor access and indoor stocking density on behaviour and stress in broilers in the subhumid tropics. Animals 9(12), 1016.

Studies investigating the welfare of commercial-line broiler chickens raised in houses with outdoor access in the tropics are scarce, and none have investigated whether responses vary according to indoor conditions. Hence, we assessed the effects...

Message, R., Greenhough, B. 2019. “But it’s just a fish”: Understanding the challenges of applying the 3Rs in laboratory aquariums in the UK. Animals 9(12), 1075.

Adopting a social science perspective and qualitative methodology on the problem of laboratory fish welfare, this paper examines some underlying social factors and drivers that influence thinking, priorities and implementation of fish welfare initiatives and...

Mather, J. A. 2019. Ethics and care: For animals, not just mammals. Animals 9(12), 1018.

Animals come in a huge array of types, species and structures, but without realizing it, we have focused our care on those like us, mammals. They look something like us, so it's easy to empathize...