Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Clay, A. W., Bard, K. A., Bloomsmith, M. A. 2018. Effects of sex and early rearing condition on adult behavior, health, and well-being in captive chimpanzees (Pan troglodytes). Behavioural Processes 156, 58-76.

Scientific evaluation of management strategies for captive species is part of the establishment of best practices for animal welfare. Here we report the effects of sex, rearing, and a sex-by-rearing interaction on adult, captive chimpanzees’...

McCowan, B., Beisner, B., Hannibal, D. 2018. Social management of laboratory rhesus macaques housed in large groups using a network approach: A review. Behavioural Processes 156, 77-82.

Biomedical facilities across the nation and worldwide aim to develop cost-effective methods for the reproductive management of macaque breeding groups, typically by housing macaques in large, multi-male multi-female social groups that provide monkey subjects for...

Ekanayake-Alper,D. K., Wilson, S. R., Scholz, J. A. 2018. Retrospective review of surgical outcomes and pair-housing success in vasectomized rhesus macaques (Macaca mulatta). Comparative Medicine 68(2), 168–176.

Providing social housing for adult male macaques can be challenging. One successful strategy for long-term social housing of adult male macaques is to pair them with adult females; however, unwanted breeding must be prevented by...

Unakafov, A. M., Möller, S., Kagan, I. et al. 2018. Using imaging photoplethysmography for heart rate estimation in non-human primates. PLOS ONE 13(8), e0202581.

For humans and for non-human primates heart rate is a reliable indicator of an individual’s current physiological state, with applications ranging from health checks to experimental studies of cognitive and emotional state. In humans, changes...

Edmonds, D., Razaiarimahefa, T., Kessler, E. et al. 2018. Natural exposure to ultraviolet-B radiation in two species of chameleons from Madagascar. Zoo Biology 37(6), 452-457.

Many reptiles require ultraviolet-B radiation between 290 and 315 nm (UV-B) to synthesize vitamin D3 and process dietary calcium. In captivity, exposure to too little or too much UV-B can result in health problems such...

Falcón, W., Furrer, S., Bauert, M. et al. 2018. Evaluation of artificial heating sources for the thermoregulation of Aldabra giant tortoises (Aldabrachelys gigantea) in Zurich zoo. Zoo Biology 37(6), 458-465.

We recorded the thermoregulatory patterns of five Aldabra giant tortoises (Aldabrachelys gigantea) (25-193 kg) during spring (ZRH spring trial), after the installation of a heating area (concrete heat pad and basking lamp) at Zurich Zoo...

Tan, A. W. Y., Dominy, N. J. 2018. Validation of a noninvasive hair trapping method for extractive-foraging primates. Folia Primatologica 89(6), 415–422.

Hair is a useful source of biological information. For example, the bulb can be a source of high-quality genetic material, whereas the shaft can be useful for measuring heavy metals and some hormones, such as...

Pasmans, F., Bogaerts, S., Braeckman, J. et al. 2017. Future of keeping pet reptiles and amphibians: Towards integrating animal welfare, human health and environmental sustainability. Veterinary Record 181(17), 450.

The keeping of exotic pets is currently under debate and governments of several countries are increasingly exploring the regulation, or even the banning, of exotic pet keeping. Major concerns are issues of public health and...

Bardi, M., Prugh, A. M., Eubanks, B. T. et al. 2017. Physiologic correlates of interactions between adult male and immature long-tailed macaques (Macaca fascicularis). JAALAS 56(6), 718-728.

Interactions between adult males and immature members of the same species are rare in most mammals; in contrast, an estimated 40% of primate species are characterized by an involvement of males in the social life...

Truelove, M. A., Martin, A. L., Perlman, J. E. et al. 2017. Two methods of social separation for paired adolescent male rhesus macaques (Macaca mulatta). JAALAS 56(6), 729-734.

Literature-based recommendations regarding how to separate pairs of laboratory-housed NHP when required for research, veterinary, or management needs are unavailable. This study assessed 2 separation techniques—rapid and stepwise—to determine whether a period of limited social...

Theil, J. H., Beisner, B. A., Hill, A. E. et al. 2017. Effects of human management events on conspecific aggression in captive rhesus macaques (Macaca mulatta). JAALAS 56(2), 122-130.

Conspecific aggression in outdoor-housed rhesus macaques (Macaca mulatta) at primate research facilities is a leading source of trauma and can potentially influence animal wellbeing and research quality. Although aggression between macaques is a normal part...

Johnston, J. M., Wilson, J. M., Smith, A. L. et al. 2017. Using a cageside device for testing glycosylated hemoglobin in cynomolgus macaques (Macaca fascicularis). JAALAS 56(1), 90-94.

Recording an accurate body temperature is important to assess an animal's health status. We compared temperature data from sedated cynomolgus macaques (Macaca fascicularis) to evaluate differences between rectal, infrared (inguinal and chest), and implanted telemetry...

Pomerantz, O., Baker, K. C. 2017. Higher levels of submissive behaviors at the onset of the pairing process of rhesus macaques (Macaca mulatta) are associated with lower risk of wounding following introduction. American Journal of Primatology 79(8), e22671.

Social housing of rhesus macaques (Macaca mulatta) is considered to be the cornerstone of behavioral management programs in biomedical facilities. However, it also involves the risk of socially inflicted trauma. The ability to avoid such...

Truelove, M. A., Martin, A. L., Perlman, J. E. et al. 2017. Pair housing of macaques: A review of partner selection, introduction techniques, monitoring for compatibility, and methods for long-term maintenance of pairs. American Journal of Primatology 79(1), e22485.

Pair housing of macaques has become a widely implemented compromise between meeting the social needs of the monkeys and allowing for their use in biomedical research. While beneficial to the animals, pair housing can provide...

Hannibal, D. L., Bliss-Moreau, E., Vandeleest, J. et al. 2017. Laboratory rhesus macaque social housing and social changes: Implications for research. American Journal of Primatology 79(1), e22528.

Macaque species, specifically rhesus (Macaca mulatta), are the most common nonhuman primates (NHPs) used in biomedical research due to their suitability as a model of high priority diseases (e.g., HIV, obesity, cognitive aging), cost effective...

Capitanio, J. P., Blozis, S. A., Snarr, J. et al. 2017. Do “birds of a feather flock together” or do “opposites attract”? Behavioral responses and temperament predict success in pairings of rhesus monkeys in a laboratory setting. American Journal of Primatology 79(1), e22464.

The growing recognition that social needs of primates in captivity must be addressed can present challenges to staff at primate facilities charged with implementing pair‐housing solutions for animals. Unfortunately, there are few published papers that...

Jorgensen, M. J., Lambert, K. R., Breaux, S. D. et al. 2017. Pair housing of vervets/African green monkeys for biomedical research. American Journal of Primatology 79(1), e22501.

Vervets, also known as African green monkeys, are a nonhuman primate species widely used in biomedical research. However, there are currently few references available describing techniques and rates of success for pair‐housing this species. We...

Worlein, J. M.,Kroeker, R., Lee, G. H. et al. 2017. Socialization in pigtailed macaques (Macaca nemestrina). American Journal of Primatology 79(1), e22556.

In response to new emphasis by regulatory agencies regarding socialization, behavioral management programs are allocating greater resources to maximize socialization opportunities for laboratory primates. Information regarding predictors of compatibility and risk of injury for all...

Carlson, A., Allen, C., Skoumbourdis, E. et al. 2017. Cooked food for non-human primates: A discussion by the Laboratory Animal Refinement & Enrichment Forum. Animal Technology and Welfare 16(2), 124-126.

"Do any of you give cooked food like pasta, potatoes or vegetables to non-human primates? What’s your experience? Do the animals benefit from cooked food; do they like it; does it affect their health in...

Rose, P. E., Nash, S. M., Riley, L. M. 2017. To pace or not to pace? A review of what abnormal repetitive behavior tells us about zoo animal management. Journal of Veterinary Behavior 20, 11-21.

Performance of abnormal repetitive behavior (ARB) is noted in many captive wild species. ARB can be categorized into 2 basic forms: those whose aim appears to be to compulsively reach an inappropriate goal and those...

Knapek, K. J., Adams, M. K., Ayers, J. D. 2017. What’s in our chamber of secrets? Python housing in a laboratory setting. Laboratory Animal Science Professional 5(4) (December), 16-19.

At Colorado State University we have an investigator who requested care for 2 different species of pythons, the green tree python (Morelia viridis) and the ball python (Python reguis), to study the pathology of an...

Sands, C., Evans, C., Buckmaster, C. A. 2017. The grooming sleeve: Encouraging conspecific-like behavior and strengthening the human-animal bond. Laboratory Animal Science Professional 5(2) (June), 52-53.

The act of grooming has been found to greatly decrease stress, heart rate, and cortisol levels in nonhuman primates; this decrease in stress and cortisol is seen in the animal being groomed, as well as...

Daoudi, S., Badihi, G., Buchanan-Smith, H. 2017. Is mixed-species living cognitively enriching? Enclosure use and welfare in two captive groups of tufted capuchins (Sapajus apella) and squirrel monkeys (Saimiri sciureus). Animal Behavior and Cognition 4(1).

Non-human primates have complex relationships with conspecifics and also other animals with whom they share their habitat in the wild. Some primates, such as capuchin monkeys (Sapajus apella) and squirrel monkeys (Saimiri sciureus), naturally associate...

Riley, J. L., Noble, D. W. A., Byrne, R. W. et al. 2017. Does social environment influence learning ability in a family-living lizard? Animal Cognition 20(3), 449–458.

Early developmental environment can have profound effects on individual physiology, behaviour, and learning. In birds and mammals, social isolation during development is known to negatively affect learning ability; yet in other taxa, like reptiles, the...

Yamanashi, Y., Teramoto, M., Morimura, N. et al. 2016. Effects of relocation and individual and environmental factors on the long-term stress levels in captive chimpanzees (Pan troglodytes): Monitoring hair cortisol and behaviors. PLOS ONE 11(7), e0160029.

Understanding the factors associated with the long-term stress levels of captive animals is important from the view of animal welfare. In this study, we investigated the effects of relocation in addition to individual and environmental...