Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Marcet-Rius, M., Fàbrega, E., Cozzi, A. et al. 2019. Are tail and ear movements indicators of emotions in tail-docked pigs in response to environmental enrichment? Animals 9(7), 449.

The inclusion of emotional indicators in farm monitoring methods can improve welfare assessments. Studies in controlled conditions have suggested that increased tail movement is an indicator of positive emotions in pigs, while others have proposed...

Larsen, M. L. V., Pedersen, L. J., Jensen, D. B. 2019. Prediction of tail biting events in finisher pigs from automatically recorded sensor data. Animals 9(7), 458.

Tail biting in pigs is an animal welfare problem, and tail biting should be prevented from developing into tail damage. One strategy could be to predict events of tail biting so that the farmer can...

Chou, J.-Y., O'Driscoll, K., D'Eath, R. B. et al. 2019. Multi-step tail biting outbreak intervention protocols for pigs housed on slatted floors. Animals 9(8), 582.

Solutions are needed to keep pigs under commercial conditions without tail biting outbreaks (TBOs). However, as TBOs are inevitable, even in well managed farms, it is crucial to know how to manage TBOs when they...

Mattiello, S., Battini, M., De Rosa, G. et al. 2019. How can we assess positive welfare in ruminants? Animals 9(10), 758.

Until now, most research has focused on the development of indicators of negative welfare, and relatively few studies provide information on valid, reliable, and feasible indicators addressing positive aspects of animal welfare. However, a lack...

Wallgren, T., Lundeheim, N., Wallenbeck, A. et al. 2019. Rearing pigs with intact tails—Experiences and practical solutions in Sweden. Animals 9(10), 812.

Tail biting is a common issue within commercial pig production. It is mainly an indicator of inadequate housing environment and results in reduced health welfare and production. To reduce the impact of tail biting, pigs...

Buijs, S., Muns, R. 2019. A review of the effects of non-straw enrichment on tail biting in pigs. Animals 9(10), 824.

Tail biting remains a common problem in pig production. As producers are reluctant to use straw to reduce this behaviour, we review studies on the effectiveness of other types of enrichment. Roughage, hessian sacks, compost...

Fermo, J. L., Schnaider, M. A., Silva, A. H. P. et al. 2019. Only when it feels good: Specific cat vocalizations other than meowing. Animals 9(11), 878.

Our objective was to identify and characterize the types of vocalization other than meowing (VOM) in two contexts, a pleasant and an aversive situation, and to study the effect of the sex of the animal...

Gentz, M., Lange, A., Zeidler, S. et al. 2019. Classification of pigs with tail lesions from different farrowing and rearing systems during rearing and fattening period. Animals 9(11), 949.

The aim of the present study was to classify and characterise pigs with tail lesions using a combined parameter based on the frequency and duration of tail lesions and to find out whether biologically relevant...

Duckett, L., Phelon, L., Wheeler, L. 2018. A pig’s tale, “travelling in style”. Animal Technology and Welfare 17(3), 189-192 (IAT Congress 2018 Poster Presentation).

This paper describes the design and construction – by Animal Care Technicians – of a cage-style crate to transport experimental pigs between buildings that minimizes harm and distress.

Urrutia, A., Martínez-Byer, S., Szenczi, P. et al. 2019. Stable individual differences in vocalisation and motor activity during acute stress in the domestic cat. Behavioural Processes 165, 58-65.

The behavioural assessment of individual animals in stressful situations should consider measures which are consistent across repeated testing, and therefore truly representative of an individual's behaviour. Here we report a study conducted on 40 neutered...

National Academies of Sciences, Engineering, and Medicine. 2019. Care, Use, and Welfare of Marmosets as Animal Models for Gene Editing-Based Biomedical Research: Proceedings of a Workshop. The National Academies Press: Washington, DC, 122 pp.

The marmoset, a type of small monkey native to South America, is a research model of increasing importance for biomedical research in the United States and globally. Marmosets offer a range of advantages as animal...

Warwick, C., Arena, P., Steedman, C. 2019. Spatial considerations for captive snakes. Journal of Veterinary Behavior 30, 37-48.

Captive environments for snakes commonly involve small enclosures with dimensions that prevent occupants from adopting straight line body postures. In particular, the commercial, hobby, and pet sectors routinely utilize small vivaria and racking systems, although...

Balansard, I., Cleverley, L., Cutler, K. L. et al. 2019. Revised recommendations for health monitoring of non-human primate colonies (2018): FELASA Working Group Report. Laboratory Animals 53(5), 429–446.

The genetic and biological similarity between non-human primates and humans has ensured the continued use of primates in biomedical research where other species cannot be used. Health-monitoring programmes for non-human primates provide an approach to...

Boileau, A., Farish, M., Turner, S. P. et al. 2019. Infrared thermography of agonistic behaviour in pigs. Physiology & Behavior 210, 112637.

Infrared thermography (IRT) or thermal imaging is increasingly being used as a non-invasive method to gain information on animals' physiological and emotional state. IRT has the potential to serve as a non-invasive quantitative assessment method...

Ermatinger, F. A., Brügger, R. K., Burkart, J. M. 2019. The use of infrared thermography to investigate emotions in common marmosets. Physiology & Behavior 211, 112672.

Measuring body surface temperature changes with infrared thermography has recently been put forward as a non-invasive alternative measure of physiological correlates of emotional reactions. In particular, the nasal region seems to be highly sensitive to...

Broche Jr., N., Takeshita, R. S. C., Mouri, K. et al. 2019. Salivary alpha-amylase enzyme is a non-invasive biomarker of acute stress in Japanese macaques (Macaca fuscata). Primates volume 60(6), 547–558.

Salivary alpha-amylase (sAA) enzyme functions as a digestive enzyme in many species that consume starch in their diet. Human studies have also revealed that sAA enzyme activity levels are positively correlated with the release of...

Poirier, C., Oliver, C. J., Castellano Bueno, J. et al. 2019. Pacing behaviour in laboratory macaques is an unreliable indicator of acute stress. Scientific Reports 9, 7476.

Pacing behaviour, the most frequent stereotypic behaviour displayed by laboratory rhesus macaques (Macaca mulatta) is often used as an indicator of stress. In this study, we investigated how reliable this welfare indicator is at detecting...

Egelkamp, C. L., Ross, S. R. 2019. A review of zoo-based cognitive research using touchscreen interfaces. Zoo Biology 38(2), 220-235.

In the past few decades, there has been an increase in the number of zoo-based touchscreen studies of animal cognition around the world. Such studies have contributed to the field of comparative cognition despite the...

Camps, T., Amat, M., Manteca, X. 2019. A review of medical conditions and behavioral problems in dogs and cats. Animals 9(12), 1133.

Not all animals behave identically when faced with the same situation. These individual differences in the expression of their behavior could be due to many factors, including medical conditions. These medical problems can change behavior...

Elwood, R. W. 2019. Assessing the potential for pain in crustaceans and other invertebrates. In: The Welfare of Invertebrate Animals. Carere, C., Mather, J. (eds), 147-177. Springer, Cham.

All animals face hazards that cause tissue damage, and most have nociceptive reflex responses that protect them from such damage. However, some taxa have also evolved the capacity for pain experience, presumably to enhance long-term...

McMillan, F. D. (ed). 2019. Mental Health and Well-being in Animals (2nd ed). CABI, Wallingford, UK.

This second edition is fully revised, expanded, and comprehensively updated with the most current knowledge about the full array of mental health issues seen in animals. Written by key opinion leaders, internationally-recognized experts and specialists...

Shelton, K. A., Nehete, B. P., Chitta, S. et al. 2019. Effects of transportation and relocation on immunologic measures in cynomolgus macaques (Macaca fascicularis). JAALAS 58(6), 774–782.

NHP are a small, but critical, portion of the animals studied in research laboratories. Many NHP are imported or raised at one facility and subsequently moved to another facility for research purposes. To improve our...

Descovich, K. A., Richmond, S. E., Leach, M. C. et al. 2019. Opportunities for refinement in neuroscience: Indicators of wellness and post-operative pain in laboratory macaques. Alternatives to Animal Experimentation 36(4), 535-554.

Being able to assess pain in nonhuman primates undergoing biomedical procedures is important for preventing and alleviating pain, and for developing better guidelines to minimize the impacts of research on welfare in line with the...

Gott, A., Andrews, C., Bedford, T. et al. 2019. Developmental history and stress responsiveness are related to response inhibition, but not judgement bias, in a cohort of European starlings (Sturnus vulgaris). Animal Cognition 22(1), 99–111.

Judgement bias tasks are designed to provide markers of affective states. A recent study of European starlings (Sturnus vulgaris) demonstrated modest familial effects on judgement bias performance, and found that adverse early experience and developmental...

D’Eath, R. B., Jack, M., Futro, A. et al. 2018. Automatic early warning of tail biting in pigs: 3D cameras can detect lowered tail posture before an outbreak. PLOS ONE 13(4), e0194524.

Tail biting is a major welfare and economic problem for indoor pig producers worldwide. Low tail posture is an early warning sign which could reduce tail biting unpredictability. Taking a precision livestock farming approach, we...