Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Neal Webb, S. J., Hau, J., Schapiro, S. J. 2018. A comparison of activity patterns of captive chimpanzees (Pan troglodytes) housed in primadomes™ or corrals. American Journal of Primatology 80(S1), 45-46 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #141).

Primadomes™ and corrals, two types of housing options available to captive chimpanzees, differ in several physical features, including closed (primadomes™) or open (corrals) tops, mesh (primadomes™) or concrete (corrals) walls, and available space per animal...

Yoshimoto, T., Takahashi, E., Yamashita, S. et al. 2018. Larger cages with housing unit environment enrichment improve the welfare of marmosets. Experimental Animals 67(1), 31-39.

The provision of adequate space for laboratory animals is essential not only for good welfare but accurate studies. For example, housing conditions for primates used in biomedical research may negatively affect welfare and thus the...

Webb, S. J. N., Hau, J., Schapiro, S. J. 2018. Refinements to captive chimpanzee (Pan troglodytes) care: a self-medication paradigm. Animal Welfare 27(4), 327-341.

In an effort to enhance welfare, behavioural management continually refines methods of non-human primate (NHP) care. Chimpanzees (Pan troglodytes) are one of the most cognitively complex captive NHPs and they have been observed to self-medicate...

Campler, M. R., Jensen, M. B., Munksgaard, L. 2018. The effect of deep straw versus cubicle housing on behaviour during the dry period in Holstein cows. Applied Animal Behaviour Science 209, 1-7.

The present observational study assessed the effect of deep straw bedding compared to cubicles during the dry period on lying-, feeding- and agonistic behaviour in Holstein cows. A total of 74 primi- (heifers) and multiparous...

Bueno da Silva, A. P., Oliveira, I. P. M. R., Bastos-Pereira, R. et al. 2018. Are laboratory studies on behavior of troglobitic species always trustful? A case study with an isopod from Brazil. Behavioural Processes 153, 55-65.

There is a huge lack of information regarding the natural history of subterranean species, particularly focusing on aspects of the behavioral ecology of Brazilian cave fauna. In the present work, we aimed to describe and...

Edwards, G. L., Michael, J. A., Parks., A. 2018. Agricultural animals as biomedical models: Occupational health and safety considerations. ILAR Journal 59(2), 161-167.

The use of agricultural animals in biomedical research is increasing. Their overall size and metabolic rate, organ size, longer gestation period, and other physiological similarities make them good candidates for animal models of human disease...

Coursodon, P., Cox, L., Largent-Milnes, T. M. et al. 2018. Enhanced environmental enrichment strategies for retired rhesus macaques. Laboratory Animal Science Professional 6(2) (June), 41-43.

One challenge in providing enrichment to NHP arises following completion of their assigned studies (retired) when there tends to be a sudden decrease in provision of daily human interaction and overall stimulation that results from...

Darbyshire, A. K., Salleng, K., Chen,P. 2018. The shocking lives of electric eels. Laboratory Animal Science Professional 6(1) (March), 14-18.

Electric eels (Electrophorus electricus) are a unique species used for behavioral research in the Vanderbilt Animal Care and Use Program. Few resources are available to describe the housing and handling of this species in captivity...

Gladden, N., McKeegan, D., Viora, L. et al. 2018. Postpartum ketoprofen treatment does not alter stress biomarkers in cows and calves experiencing assisted and unassisted parturition: A randomised controlled trial. Veterinary Record 183(13), 414.

Dystocia is considered painful and stressful for both the dam and the calf, although systematic evidence of this is limited. Few studies have investigated biochemical markers of stress and pain postpartum and whether any adverse...

Nehete, P. N., Shelton, K. A., Nehete, B. P. et al. 2017. Effects of transportation, relocation, and acclimation on phenotypes and functional characteristics of peripheral blood lymphocytes in rhesus monkeys (Macaca mulatta). PLOS ONE 12(12), e0188694.

Nonhuman primates from domestic sources constitute a small, but critical, proportion of animals studied in research laboratories. Many of these nonhuman primates are raised at one facility and subsequently transported/relocated to another facility for research...

Tsang, B., Zahid, H., Ansari, R. et al. 2017. Breeding zebrafish: A review of different methods and a discussion on standardization. Zebrafish 14(6), 561-573.

In recent years, a rapidly increasing number of scientific papers have been published that utilize zebrafish (Danio rerio) as an alternative model organism in the study of a wide range of biological phenomena from cancer...

Lopez-Luna, J., Al-Jubouri, Q., Al-Nuaimy, W. et al. 2017. Reduction in activity by noxious chemical stimulation is ameliorated by immersion in analgesic drugs in zebrafish. Journal of Experimental Biology 220(8), 1451-1458.

Research has recently demonstrated that larval zebrafish show similar molecular responses to nociception to those of adults. Our study explored whether unprotected larval zebrafish exhibited altered behaviour after exposure to noxious chemicals and screened a...

Rice, C., Eberhart, N., Krawczel, P. 2017. Prepartum lying behavior of Holstein dairy cows housed on pasture through parturition. Animals 7(4), 32.

Utilizing pasture-based systems may increase cow comfort during late gestation and calving as it lacks the constraints of confinement housing. The objective of this study was to quantify lying behavior and activity of Holstein dairy...

Nordquist, R., van der Staay, F., van Eerdenburg, F. et al. 2017. Mutilating procedures, management practices, and housing conditions that may affect the welfare of farm animals: Implications for welfare research. Animals 7(2), 12.

A number of mutilating procedures, such as dehorning in cattle and goats and beak trimming in laying hens, are common in farm animal husbandry systems in an attempt to prevent or solve problems, such as...

Salyards, G. W., Lemoy, M.-J., Knych, H. K. et al. 2017. Pharmacokinetics of a novel, transdermal fentanyl solution in rhesus macaques (Macaca mulatta). JAALAS 56(4), 443-451.

Rhesus macaques (Macaca mulatta) are the most commonly used NHP biomedical model and experience both research and clinical procedures requiring analgesia. Opioids are a mainstay of analgesic therapy. A novel, transdermal fentanyl solution (TFS) has...

Chatigny, F., Kamunde, C., Creighton, C. M. et al. 2017. Uses and doses of local anesthetics in fish, amphibians, and reptiles. JAALAS 56(3), 244-253.

Local anesthetics are an integral part of routine pain management in mammals, yet their use is relatively limited in fish, amphibians and reptiles. These animals frequently undergo potentially painful surgical procedures and therefore could possibly...

Cinque, C., De Marco, A., Mairesse, J. et al. 2017. Relocation stress induces short-term fecal cortisol increase in Tonkean macaques (Macaca tonkeana). Primates 58(2), 315-321.

The level of glucocorticoids, especially if obtained from noninvasive sampling, can be used as an index of animal well-being, allowing evaluation of the animal’s response to environmental modifications. Despite evidence that these hormones play a...

Lopez-Luna, J., Canty, M. N., Al-Jubouri, Q. et al. 2017. Behavioural responses of fish larvae modulated by analgesic drugs after a stress exposure. Applied Animal Behaviour Science 195, 115-120.

Fish are known to respond to a wide range of irritant chemicals, displaying clear behavioural changes after exposure to potentially noxious stimuli. Recent evidence shows that these agents can have an impact on larval forms...

Bryan, K., Bremner-Harrison, S., Price, E. et al. 2017. The impact of exhibit type on behaviour of caged and free-ranging tamarins. Applied Animal Behaviour Science 193, 77-86.

The lack of appropriate stimuli associated with captive environments has been documented to cause several behavioural and physiological issues in captive species, including loss of natural behaviours, psychopathologies and decreased reproductive success. Providing free-ranging, naturalistic...

Lopez-Luna, J., Al-Jubouri, Q., Al-Nuaimy, W. et al. 2017. Impact of analgesic drugs on the behavioural responses of larval zebrafish to potentially noxious temperatures. Applied Animal Behaviour Science 188, 97-105.

Recent studies have demonstrated that fish exhibit behavioural responses to noxious stimuli, including mechanical, chemical or thermal stimulation. In many cases, these responses are characterised by a reduction in the locomotor activity, which in turn...

Schroeder, P. G., Sneddon, L. U. 2017. Exploring the efficacy of immersion analgesics in zebrafish using an integrative approach. Applied Animal Behaviour Science 187, 93-102.

Home Office guidelines recommend the use of analgesics for all protected species, including fish during scientific procedures likely to result in pain, suffering, distress and lasting harm. In larger fish species some drugs have shown...

Li, S.-R., Hao, X., Bi, J.-H. et al. 2017. Why do female desert lizards construct burrows to lay eggs? Behaviour 154(9/10), 1051–1068.

Many oviparous animals construct well-designed nests to provide relatively favourable conditions for their eggs and hatchlings, but the direct evidence that nest structure can determine their reproductive success is insufficient. In the present study, we...

McMillan, J. L., Bloomsmith, M. A., Prescott, M. J. 2017. An international survey of approaches to chair restraint of nonhuman primates. Comparative Medicine 67(5), 442–451.

Specifically designed restraint chairs are the preferred method of restraint for research studies that require NHP to sit in place for sustained periods of time. In light of increasing emphasis on refinement of restraint to...

Stevens, C. H., Croft, D. P., Paull, G. C. et al. 2017. Stress and welfare in ornamental fishes: What can be learned from aquaculture? Journal of Fish Biology 91(2), 409-428.

The ornamental fish trade is estimated to handle up to 1.5 billion fishes. Transportation and handling of fishes imposes a range of stressors that can result in mortality at rates of up to 73%. Given...

Lidster, K., Readman, G. D., Prescott, M. J. et al. 2017. International survey on the use and welfare of zebrafish Danio rerio in research. Journal of Fish Biology 90(5), 1891-1905.

A survey was conducted regarding zebrafish Danio rerio use for scientific research with a focus on: anaesthesia and euthanasia; housing and husbandry; breeding and production; refinement opportunities. A total of 98 survey responses were received...