Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Rault, J.-L., Waiblinger, S., Boivin, X. et al. 2020. The power of a positive human–animal relationship for animal welfare. Frontiers in Veterinary Science 7, 590867.

Domestic animals often seek and enjoy interacting with humans. Positive human–animal relationships can elicit positive emotions and other positive welfare outcomes. Nevertheless, our understanding of the underlying processes that govern the positive perception of humans...

Taylor, P. 2020. Remote controlled nociceptive threshold testing systems in large animals. Animals 10(9), 1556.

Nociceptive threshold (NT) testing is widely used for the study of pain and its alleviation. The end point is a normal behavioural response, which may be affected by restraint or unfamiliar surroundings, leading to erroneous...

de Castro Travnik, I., de Souza Machado, D., de Silva Gonçalves, L. et al. 2020. Temperament in domestic cats: A review of proximate mechanisms, methods of assessment, its effects on human—cat relationships, and one welfare. Animals 10(9), 1516.

Temperament can be defined as interindividual differences in behavior that are stable over time and in different contexts. The terms ‘personality’, ‘coping styles’, and ‘behavioral syndromes’ have also been used to describe these interindividual differences...

Vojtkovská, V., Voslářová, E., Večerek, V. 2020. Methods of assessment of the welfare of shelter cats: A review. Animals 10(9), 1527.

At any moment, there are millions of cats housed in foster care facilities for abandoned and stray animals for various reasons worldwide. Care, management and regulation among these facilities differ. Moreover, shelters can never substitute...

Elmi, A., Galligioni, V., Govoni, N. et al. 2020. Quantification of hair corticosterone, DHEA and testosterone as a potential tool for welfare assessment in male laboratory mice. Animals 10(12), 2408.

Steroids, providing information regarding several biological patterns including stress and sexual behavior, have been investigated in different matrices in laboratory mice. Data regarding hair quantification, indicative of longer timespans when compared to blood and saliva...

Prato-Previde, E., Cannas, S., Palestrini, C. et al. 2020. What’s in a meow? A study on human classification and interpretation of domestic cat vocalizations. Animals 10(12), 2390.

Although the domestic cat (Felis catus) is probably the most widespread companion animal in the world and interacts in a complex and multifaceted way with humans, the human–cat relationship and reciprocal communication have received far...

Do, J. P., Defensor, E. B., Ichim, C. V. et al. 2020. Automated and continuous monitoring of animal welfare through digital alerting. Comparative Medicine 70(4), 313-327.

A primary goal in preclinical animal research is respectful and responsible care aimed toward minimizing stress and discomfort while enhancing collection of accurate and reproducible scientific data. Researchers use hands-on clinical observations and measurements as...

Slavík, O., Horký, P., Velíšek, J., et al. 2020. Pupil size variation as a response to stress in European catfish and its application for social stress detection in albino conspecifics. PLOS ONE, 15(12), e0244017.

Hormonal changes such as increased cortisol level in blood plasma in response to stress and social environmental stimuli are common among vertebrates including humans and typically accompanied by other physiological processes, such as changes in...

Mogil, J. S., Pang, D. S. J., Silva Dutra, G. G. et al. 2020. The development and use of facial grimace scales for pain measurement in animals. Neuroscience & Biobehavioral Reviews 116, 480-496.

The measurement of pain in animals is surprisingly complex, and remains a critical issue in veterinary care and biomedical research. Based on the known utility of pain measurement via facial expression in verbal and especially...

Lefebvre, E., Granon, S., Chauveau, F. 2020. Social context increases ultrasonic vocalizations during restraint in adult mice. Animal Cognition 23(2), 351–359.

Adult mice emit many ultrasonic vocalizations (USVs) during social interaction tasks, but only a few studies have yet reported USVs in stressed adult mice. Our aim was to study which experimental conditions favor USV emission...

Ellis, T., Rimmer, G. S. E., Parker, S.-J. et al. 2019. In-tank underwater cameras can refine monitoring of laboratory fish. Animal Welfare 28(2), 191-203.

Laboratory animals need to be monitored to check the status of their health and welfare. Routine checks of laboratory fish are limited to visual observations of physical appearance and behaviour, but for species held in...

Fehlhaber, B., Heinemann, A. S., Rübensam, K. et al. 2019. A sensitive scoring system for the longitudinal clinical evaluation and prediction of lethal disease outcomes in newborn mice. Scientific Reports 9, 5919.

Neonatal animal models are increasingly employed in order to unravel age-specific disease mechanisms. Appropriate tools objectifying the clinical condition of murine neonates are lacking. In this study, we tested a scoring system specifically designed for...

Cho, C., Michalidis, V., Lecker, I. et al. 2019. Evaluating analgesic efficacy and administration route following craniotomy in mice using the grimace scale. Scientific Reports 9, 359.

Most research laboratories abide by guidelines and mandates set by their research institution regarding the administration of analgesics to control pain during the postoperative period. Unfortunately, measuring pain originating from the head is difficult, making...

Howell, C. P., Cheyne, S. M. 2019. Complexities of using wild versus captive activity budget comparisons for assessing captive primate welfare. Journal of Applied Animal Welfare Science 22(1), 78-96.

Activity budget comparisons between groups or individuals in the wild and those in captivity are commonly used to determine the range of wild-type behaviors that nonhuman animals in captivity perform. These comparisons are conducted with...

Arechavala-Lopez, P., Saraiva, J. L. 2019. Welfare of Cultured and Experimental Fishes. Basel, Switzerland: MDPI, 132 pages.

This open access book is a printed edition of the Special Issue on Welfare of Cultured and Experimental Fishes that was published in the journal Fishes. The PDF is free for download.

Fife-Cook, I., Franks, B. 2019. Positive welfare for fishes: Rationale and areas for future study. Fishes 4(2), 31.

Traditional animal welfare paradigms have focused on maintaining physical health and mitigating negative impacts to wellbeing. Recently, however, the field has increasingly recognized the importance of positive welfare (i.e., mental and physical states that exceed...

Saraiva, J. L., Arechavala-Lopez, P., Castanheira, M. F. et al. 2019. A global assessment of welfare in farmed fishes: The FishEthoBase. Fishes 4(2), 30.

Fish welfare is an essential issue that needs to be tackled by the aquaculture industry. In order to address it, studies have been limited to a small number of species and the information is generally...

López-Álvarez, J., Sanjorge, Y., Soloaga, S. et al. 2019. Looking for visitor's effect in sanctuaries: Implications of guided visitor groups on the behavior of the chimpanzees at Fundació Mona. Animals 9(6), 347.

The question of 'if and how captive primates are affected by visitors' has gained increasing attention over the last decades. Although the majority reported undesirable effects on behavior and wellbeing, many studies reported contradicting results...

Fermo, J. L., Schnaider, M. A., Silva, A. H. P. et al. 2019. Only when it feels good: Specific cat vocalizations other than meowing. Animals 9(11), 878.

Our objective was to identify and characterize the types of vocalization other than meowing (VOM) in two contexts, a pleasant and an aversive situation, and to study the effect of the sex of the animal...

Carbajal, A., Soler, P., Tallo-Parra, O. et al. 2019. Towards non-invasive methods in measuring fish welfare: The measurement of cortisol concentrations in fish skin mucus as a biomarker of habitat quality. Animals 9(11), 939.

Cortisol levels in fish skin mucus have shown to be good stress indicators in farm fish exposed to different stressors. Its applicability in free-ranging animals subject to long-term environmental stressors though remains to be explored...

Dench, J., McLaren-Jones, R., Vancollie, V. et al. 2019. Optimising health & welfare tracking using the Sanger Mouse Database. Animal Technology and Welfare 18(1), 62-64.

Health tracking of animals is required legally under the Animals (Scientific Procedures) Act 1986 (ASPA) to prevent pain, avoidable suffering, distress or lasting harm. This is important with Genetically Modified (GM) animals as they are...

Gurney, L. 2019. In-vivo imaging at NIBSC and how we use it to promote the 3Rs. Animal Technology and Welfare 18(2), 143-144. (IAT Congress 2018 Poster Presentation)

In-vivo imaging is a revolutionary technology offering a powerful tool for constructing studies involving mice. In the Biological Services Department (BSD) at NIBSC, the IVIS® Spectrum In Vivo System model is used to perform our...

Urrutia, A., Martínez-Byer, S., Szenczi, P. et al. 2019. Stable individual differences in vocalisation and motor activity during acute stress in the domestic cat. Behavioural Processes 165, 58-65.

The behavioural assessment of individual animals in stressful situations should consider measures which are consistent across repeated testing, and therefore truly representative of an individual's behaviour. Here we report a study conducted on 40 neutered...

Parsons, C. E., LeBeau, R. T., Kringelbach, M. L. et al. 2019. Pawsitively sad: Pet-owners are more sensitive to negative emotion in animal distress vocalizations. Royal Society Open Science 6(8), 181555.

Pets have numerous, effective methods to communicate with their human hosts. Perhaps most conspicuous of these are distress vocalizations: in cats, the ‘miaow’ and in dogs, the ‘whine’ or ‘whimper’. We compared a sample of...

Cowley, P. M., Roberts, C. R., Baker, A. J. 2019. Monitoring the health status of mice with bleomycin-induced lung injury by using body condition scoring. Comparative Medicine 69(2), 95–102.

Well-defined, humane endpoints aid in monitoring animal health status during disease development. Body condition scoring (BCS) is a method for assessing health status in mouse studies where wasting and death are potential endpoints. Whether BCS...