Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Oehm, A. W., Jensen, K. C., Tautenhahn, A. et al. 2020. Factors associated with lameness in tie stall housed dairy cows in south Germany. Frontiers in Veterinary Science 7, 601640.

Lameness remains a major concern for animal welfare and productivity in modern dairy production. Even though a trend toward loose housing systems exists and the public expects livestock to be kept under conditions where freedom...

Abayarathna, T., Webb, J. K. 2020. Effects of incubation temperatures on learning abilities of hatchling velvet geckos. Animal Cognition 23(4), 613–620.

Stressful environments in utero can have a profound influence on cognitive functions and learning ability. In lizards, thermal environments experienced by embryos can shape a range of traits, including sex, body size, and locomotor performance...

Estien, C., O’Connell, C., Francis, X. et al. 2020. Temporary behavioral responses to playbacks by a pest parrot and implications for management. Animal Behavior and Cognition 9(4), 363–384.

Human-wildlife interactions continue to increase due to anthropogenic disturbances, with some interactions resulting in conflict. Leveraging a taxa’s bias for a particular sensory cue is a promising management avenue for reducing the potential and realized...

Saha, C. K., Yi, Q., Janke, D. et al. 2020. Opening size effects on airflow pattern and airflow rate of a naturally ventilated dairy building—A CFD study. Applied Sciences 10(17), 6054.

Airflow inside naturally ventilated dairy (NVD) buildings is highly variable and difficult to understand due to the lack of precious measuring techniques with the existing methods. Computational fluid dynamics (CFD) was applied to investigate the...

Luz, M. P. F., Maia, C. M., Arruda, L. A. S. et al. 2019. Preference for heights of feeding troughs in mares: A pilot study. Animal Welfare 28(2), 205-214.

Preferences for the height of feeding troughs of seven mares were evaluated and, as awareness of surroundings when feeding is adaptive for horses, the relationship between preference responses and attention behaviours was also assessed. First...

van Erp-van der Kooij, E., Almalik, O., Cavestany, D. et al. 2019. Lying postures of dairy cows in cubicles and on pasture. Animals 9(4), 183.

Cows housed indoors with cubicles are probably more restricted in their choice of lying posture and orientation compared with cows housed on pasture. We therefore compared lying postures on pasture in Uruguay and the Netherlands...

Mattachini, G., Pompe, J., Finzi, A. et al. 2019. Effects of feeding frequency on the lying behavior of dairy cows in a loose housing with automatic feeding and milking system. Animals 9(4), 121.

Management systems in modern dairy farms is an important issue in relation to animal comfort and welfare. The objective of this study was to determine the effect of feed delivery frequency on the behavior patterns...

Al-Marashdeh, O., Cameron, K. C., Bryant, R. H. et al. 2019. Effects of surface type in an uncovered stand-off pad system on comfort and welfare of non-lactating dairy cows during winter. Applied Animal Behaviour Science 211, 17-24.

The objective of this study was to investigate the effect of stand-off surface type on cow lying behaviour, cleanliness and lameness. One hundred and sixty Friesian × Jersey crossbreed, pregnant non-lactating dairy cows were blocked...

Vindevoghel, T. V., Fleming, P. A., Hyndman, T. H. et al. 2019. Qualitative Behavioural Assessment of Bos indicus cattle after surgical castration. Applied Animal Behaviour Science 211, 95-102.

There are various methods to perform castration of cattle, but surgical castration is the most common. Although it is well documented that surgical procedures inflict pain, analgesic use is usually omitted for surgical castration of...

Mejdell, C. M., Jørgensen, G. H. M., Buvik, T. et al. 2019. The effect of weather conditions on the preference in horses for wearing blankets. Applied Animal Behaviour Science 212, 52-57.

The use of blankets in horses is widespread in Northern Europe. However, horses are very adaptable to low temperatures and the practice is questioned because blankets may hamper heat dissipation at high temperatures and also...

Edwards, P. T., Smith, B. P., McArthur, M. L. et al. 2019. Fearful Fido: Investigating dog experience in the veterinary context in an effort to reduce distress. Applied Animal Behaviour Science 213, 14-25.

For many dogs, receiving veterinary care can be a stressful, fearful or traumatic experience. However, understanding and improving the veterinary experience for dogs is challenging due to the dynamic nature of the veterinary visit, the...

O’Driscoll, K., Lewis, E., Kennedy, E. 2019. Effect of feed allowance at pasture on the lying behaviour of dairy cows. Applied Animal Behaviour Science 213, 40-46.

In temperate climates where cows are primarily managed at pasture shortages of grass could result in nutritional deficits for the cow and may have a variety of behavioural consequences. Lying behaviour is one of the...

Tuomisto, L., Huuskonen, A., Jauhiainen, L. et al. 2019. Finishing bulls have more synchronised behaviour in pastures than in pens. Applied Animal Behaviour Science 213, 26-32.

The objective of the present study was to compare the synchronisation of the lying, feeding and standing behaviour of bulls housed in an uninsulated barn and in a pasture. Dairy (Ayrshire and Holstein-Friesian) and beef...

Stellato, A. C., Hoffman, H., Gowland, S. et al. 2019. Effect of high levels of background noise on dog responses to a routine physical examination in a veterinary setting. Applied Animal Behaviour Science 214, 64-71.

Veterinary visits result in behavioural and physiological signs of fear and stress for many companion dogs. There are a number of factors that likely contribute to this response, but little is known about possible effects...

Schou, T. M., Palme, R., Malmkvist, J. et al. 2019. Relocation shortly after mating does not have a major impact on stress responses and reproduction in female farm mink. Applied Animal Behaviour Science 214, 89-94.

On farm, female mink are exposed to acute stressors multiple times due to handling, capturing and transport with restricted movement being a typical part of the mating procedure. We hypothesised that no relocation (group NON...

Arena, L., Berteselli, G. V., Lombardo, F. et al. 2019. Application of a welfare assessment tool (Shelter Quality Protocol) in 64 Italian long-term dogs' shelters: Welfare hazard analysis. Animal Welfare 28(3), 353-363.

The confined environment of the dog shelter, particularly over extensive time-periods can impact severely on welfare. Surveillance and assessment are therefore essential components of the welfare protocol. The aim of this study was to generate...

Orihuela, A., Galina, C. S. 2019. Effects of separation of cows and calves on reproductive performance and animal welfare in tropical beef cattle. Animals 9(5), 223.

Nursing a calf suppresses postpartum ovarian activity prolonging the period of anestrus. Diverse methods are used to reduce the effect of suckling; the most popular, restricted suckling, reduces the number of encounters mother-calf. Temporal weaning...

O'Connor, C., Dowling, S., Cave, V. et al. 2019. Cow lying behaviour and bedding quality changes during five weeks on a stand-off pad. Animals 9(5), 257.

Bedding quality and cow lying time were measured during five weeks in a normal farm practice (NFP) off-paddock system with no bedding refreshment. Two groups of 100 non-lactating dairy cows were compared to groups of...

Raspa, F., Cavallarin, L., McLean, A. et al. 2019. A Review of the appropriate nutrition welfare criteria of dairy donkeys: Nutritional requirements, farm management requirements and animal-based indicators. Animals 9(6), 315.

Data are available in the scientific literature concerning the quality and usefulness of donkey milk for human consumption. However, there is a lack of studies related to the understanding of the welfare of dairy donkeys...

Barreiro-Vázquez, J. D., Miranda, M., Barreiro-Vilanova, M. I. et al. 2019. Characterization of the normal portal and hepatic blood flow of adult Holstein-Friesian cows. Animals 9(6), 386.

Knowledge of physiological portal and hepatic blood flow in cattle is essential for the use of Doppler ultrasound for diagnostic purposes. In this paper, we describe a protocol for the systematic ultrasonography evaluation of the...

Lowe, G., Sutherland, M., Waas, J. et al. 2019. Infrared thermography—A non-invasive method of measuring respiration rate in calves. Animals 9(8), 535.

Respiration rate (RR) is commonly used to assess states of cattle health and welfare such as pain, stress and disease. Traditionally, RR is measured by counting flank movements, a method often considered to be labour-intensive...

Euet, A., Lemarchand, J., Parias, C., Mach, N. et al. 2019. Housing horses in individual boxes is a challenge with regard to welfare. Animals 9(9), 621.

Horses are mainly housed in individual boxes. This housing system is reported to be highly detrimental with regard to welfare and could trigger the expression of four behavioural indicators of a compromised welfare state: stereotypies...

Lambert, H., Carder, G., D'Cruze, N. 2019. Given the cold shoulder: A review of the scientific literature for evidence of reptile sentience. Animals 9(10), 821.

We searched a selection of the scientific literature to document evidence for, and explorations into reptile sentience. The intention of this review was to highlight; (1) to what extent reptile capability for emotions have been...

Contreras-Aguilar, M. D., Henry, S., Coste, C. et al. 2019. Changes in saliva analytes correlate with horses' behavioural reactions to an acute stressor: A pilot study. Animals 9(11), 993.

Acute stress induces an array of behavioural reactions in horses that vary between individuals. Attempts to relate behavioural patterns and physiological responses have not always given clear-cut results. Here, we measured the changes in a...

Jørgensen, G. H. M., Mejdell, C. M., Bøe, K. E. 2019. The effect of blankets on horse behaviour and preference for shelter in Nordic winter conditions. Applied Animal Behaviour Science 218, 104822.

Horses use human-made shelters actively during inclement weather, but the costs of building shelters may be high and owners use blankets or rugs on horses instead. The aim of the study was to investigate how...