Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Martinic, G. 2021. Husbandry and healthcare of the Olive python (Liasis olivaceus). Animal Technology and Welfare 20(1), 44-50.

The article describes the care of the Olive python (Liasis olivaceus) including information on housing, feeding, handling, as well as the general health care of these animals. Some of the information presented is derived from...

Bahnsen, I., Riddersholm, K. V., de Knegt, L. V. et al. 2021. The effect of different feeding systems on salivary cortisol levels during gestation in sows on herd level. Animals 11(4), 1074.

The aim of this study was to investigate herd cortisol levels as an indicator of stress during gestation in three different feeding systems. Twelve commercial Danish herds with 800 to 3050 sows were included, with...

Ceballos, M. C., Rocha Góis, K. C., Parsons, T. D. et al. 2021. Impact of duration of farrowing crate closure on physical indicators of sow welfare and piglet mortality. Animals 11(4), 969.

This study examines effects of opening hinged farrowing crates 4 or 7 days post-farrowing. Sows (n = 696) allocated to 3 treatments: PC—crate closed, T4—crate opened day 4, and T7—crate opened day 7 were assessed...

Vogt, M. A., Geiger, L. M. J., Härtel, T. et al. 2021. Evaluation of potential sustainable bedding substrates focusing on preference, behavior, and stress physiology in rats—A pilot study. Animals 11(5), 1375.

Ensuring optimal housing conditions for laboratory animals is a crucial prerequisite for high-quality and ethically justifiable in vivo science. In addition to guaranteeing animal welfare and promoting scientific validity, environmental sustainability is also increasingly gaining...

Robbins, L. A., Green-Miller, A. R., Johnson, J. S. et al. 2021. One is the coldest number: How group size and body weight affect thermal preference in weaned pigs (3 to 15 kg). Animals 11(5), 1447.

Housing pigs within their thermal comfort zone positively impacts productivity and performance. However, fundamental information on behavioral thermoregulatory responses of individual and group-housed pigs is meager. As a gregarious species, pigs prefer to be near...

Lemos de Figueiredo, R., Hartley, M., Fletcher, A. W. 2021. Assessing the behaviour, welfare and husbandry of mouse deer (Tragulus spp.) in European zoos. Applied Animal Behaviour Science 237, 105283.

Mouse deer are primitive, forest ungulates found in Asia and Africa. Both the lesser mouse deer (Tragulus javanicus) and the Philippine mouse deer (T. nigricans) are managed in European zoos, but inconsistent breeding success between...

Leonard, S. M., Xin, H., Brown-Brandl, T. M. et al. 2021. Effects of farrowing stall layout and number of heat lamps on sow and piglet behavior. Applied Animal Behaviour Science 239, 105334.

Farrowing stalls are used in the United States swine industry to reduce pre-weaning piglet mortality, enable efficient individual animal management, and decrease facility construction and operating costs. The quantity and quality of space provided for...

Tokareva, M., Brown, J. A., Woodward, A. et al. 2021. Movement or more food? A comparison of motivation for exercise and food in stall-housed sows and gilts. Applied Animal Behaviour Science 240, 105348.

Despite being phased out in the EU, several states in the USA and other select countries such as Australia, gestation stalls remains a common sow housing system worldwide. In Canada, the 2014 Code of Practice...

FELASA Working Group on Farm Animals: Berset, C. M., Caristo, M. E., Ferrara, F. et al. 2021. Federation of European Laboratory Animal Science Associations recommendations of best practices for the health management of ruminants and pigs used for scientific and educational purposes. Laboratory Animals 55(2), 117-128.

Most ruminants and pigs used for scientific and educational aims are bred not for these purposes but in a farm environment. Given the wide range of diseases that these species might have, ensuring that the...

Jewell, D., Muensch, A., Kupronis, R. et al. 2021. Husbandry techniques for a research colony of veiled chameleons (Chamaeleo calyptratus). Laboratory Animal Science Professional 9(4) (July/August), 52-55.

Although most chameleon species can be challenging captives, C. calyptratus have been successfully kept and bred in captivity for over thirty years. Despite their relative familiarity, our challenge is to replicate their preferred habitats in...

Peden, R. S. E., Turner, S. P., Camerlink, I. et al. 2021. An estimation of the financial consequences of reducing pig aggression. PLOS ONE 16(5), e0250556.

Animal welfare scientists have accumulated knowledge and developed interventions to improve livestock welfare, but these are poorly adopted in commercial practice. Animal welfare interventions are rarely tested for economic viability and this limits their uptake...

Dickinson, A. 2021. Maximising efficacy of your health monitoring programme. Animal Technology and Welfare 20(3), 255-257.

There are a multitude of health monitoring techniques/ methods available. It can be difficult to know which of these to use and when to use them. This is an attempt to simplify, maximise the efficacy...

Schmidt, T., Ferrara, F., Pobloth, A.-M. et al. 2021. Large farm animals used for research purposes: A survey on purchase, housing and hygiene management. Animals 11(8), 2158.

Background: Farm animals (FAs) are frequently used in biomedical research. Recommendations for the purchase, housing and health monitoring of these animals (sheep, goats, cattle and pigs) are still missing, and many institutes have developed their...

Vitali, M., Santolini, E., Bovo, M. et al. 2021. Behavior and welfare of undocked heavy pigs raised in buildings with different ventilation systems. Animals 11(8), 2338.

The present study aimed to evaluate animal welfare of pigs from the same farm, raised with two ventilation systems. The study involved 60 pens of fattening pigs, raised in two buildings: one naturally ventilated (NV)...

Tucker, B. S., Craig, J. R., Morrison, R. S. et al. 2021. Piglet viability: A review of identification and pre-weaning management strategies. Animals 11(10), 2902.

Increased attention on the effects of the global push for a larger litter size has focused on the increased occurrence of piglets with decreased viability, which have lighter birthweights and a reduced ability to thrive...

Ferrari, P., Ulrici, A., Barbari, M. 2021. Analysis of housing risk factors for the welfare of lean and heavy pigs in a sample of European fattening farms. Animals 11(11), 3221.

Pig welfare is affected by housing conditions, the minimum requirements of which are set up by EU legislation. Animal and non-animal-based measures are useful indicators to investigate housing risk factors for pig welfare. An observational...

Huneau-Salaün, A., Bougeard, S., Balaine, L. et al. 2021. Do rubber floor mats prevent lameness in gestating sows housed in large groups? A field experiment on three commercial farms in France. Animals 11(11), 3160.

Lameness and foot disorders are major health and welfare issues in intensive swine production systems. They are exacerbated when sows are housed in large groups on slatted concrete floors during gestation. Our study aimed to...

Falendysz, E. A., Calhoun, D. M., Smith, C. A. et al. 2020. Outside the box: Working with wildlife in biocontainment. ILAR Journal 61(1), 72-85.

Research with captive wildlife in Animal Biosafety Level 2 (ABSL2) and 3 (ABSL3) facilities is becoming increasingly necessary as emerging and re-emerging diseases involving wildlife have increasing impacts on human, animal, and environmental health. Utilizing...

Locklear, J., Whiteside, T. E. 2021. Optimal colloidal water gel type and novel placement for frequent travelers. Laboratory Animal Science Professional 9(6) (November/December), 38-40.

During transportation, animals must have a water source available to prevent dehydration. Some shipping facilities use potatoes whereas, others use colloidal water gels that provide a uniform water source. The problem occurs when colloidal water...

LaFollette, M. R., Cunningham-Faughnan, T., Foley, P. L. et al. 2021. Replacing soiled bedding sentinel rodents with environmental health monitoring: Evidence and tips. Laboratory Animal Science Professional 9(6) (November/December), 46-48.

Traditional rodent health monitoring programs involve transferring soiled bedding from colony cages to sentinel cages. While it can vary, the sentinel animals are ultimately euthanized after 3-6 mo of soiled bedding exposure. Using traditional soiled...

Thatcher, D. 2021. The use of a borescope for Goodfellow’s tree kangaroo (Dendrolagus goodfellowi) husbandry. RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 48(2), 10-11.

In 2017 Bristol Zoological Gardens received two Goodfellow tree kangaroos. As this was a new marsupial species for the collection, keepers attended the European Symposium on tree kangaroos to better improve our husbandry, knowledge and...

Brox, B. W., Edwards, K., Buist, N. A. et al. 2021. Investigating food preference in zoo-housed meerkats. Zoo Biology 40(6), 517-526.

Understanding food preference among animals in human care can support improvements to welfare through training and day-to-day care (e.g., diet management). Little has been published about food preference in zoo-housed meerkats. Assessing meerkat food preference...

Misra, S., Bokkers, E., Upton, J. et al. 2021. Effect of environmental enrichment and group size on the water use and waste in grower-finisher pigs. Scientific Reports 11(1), 16380.

The grower-finisher stage accounts for 64% of the total on-farm herd water use. Part of this is consumed by the pigs, but a part is also wasted. Drinking water usage and wastage is affected by...

Hewitt, L., Small, A. 2021. Welfare of farmed crocodilians: Identification of potential animal-based measures using elicitation of expert opinion. Animals 11(12), 3450.

Animal-based measures are the measure of choice in animal welfare assessment protocols as they can often be applied completely independently to the housing or production system employed. Although there has been a small body of...