Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Nagabaskaran, G., Burman, O. H. P., Hoehfurtner, T. et al. 2021. Environmental enrichment impacts discrimination between familiar and unfamiliar human odours in snakes (Pantherophis guttata). Applied Animal Behaviour Science 237, 105278.

Environmental enrichment has been found to significantly influence the cognitive abilities of a variety of mammalian and avian species, with effects ranging from positive to negative, however, these effects have been little studied in reptiles...

Hoehfurtner, T., Wilkinson, A., Nagabaskaran, G. et al. 2021. Does the provision of environmental enrichment affect the behaviour and welfare of captive snakes? Applied Animal Behaviour Science 239, 105324.

There is a wealth of evidence demonstrating the benefits of environmental enrichment across a range of different animal species. However, there is comparatively little such research into the effect of enrichment provision on captive reptiles...

Alnes, I. B., Jensen, K. H., Skorping, A. et al. 2021. Ontogenetic change in behavioral responses to structural enrichment from fry to parr in juvenile Atlantic salmon (Salmo salar L.). Frontiers in Veterinary Science 8, 638888.

Enrichment is widely used as a tool for studying how changes in environment affect animal behavior. Here, we report an experimental study investigating if behaviors shaped by stimuli from environmental enrichment depending on the stage...

Hollandt, T., Baur, M., Wöhr, A.-C. 2021. Animal-appropriate housing of ball pythons (Python regius)—Behavior-based evaluation of two types of housing systems. PLOS ONE 16(5), e0247082.

Considering animal welfare, animals should be kept in animal-appropriate and stress-free housing conditions in all circumstances. To assure such conditions, not only basic needs must be met, but also possibilities must be provided that allow...

DePasquale, C., Kemerer, N., White, N. et al. 2021. The influence of an enriched environment in enhancing recognition memory in zebrafish (Danio rerio). Frontiers in Veterinary Science 8, 749746.

Environmental enrichment is used to increase social and physical stimulation for animals in captivity which can lead to enhanced cognition. Fundamental to the positive effect enrichment has on the brain is that it provides opportunities...

Razal, C., Miller, L. 2021. The effect of different types of environmental enrichment on Humboldt penguin Spheniscus humboldti behaviour. Journal of Zoo and Aquarium Research, 9(4), 281-286.

Penguins exhibited at zoological institutions can be prone to a foot condition known as pododermatitis (or bumblefoot) if they have high levels of sedentary behaviour. Providing penguins with environmental enrichment can increase activity levels by...

Janhunen, M., Piironen, J., Vainikka, A. et al. 2021. The effects of environmental enrichment on hatchery-performance, smolt migration and capture rates in landlocked Atlantic salmon. PLOS ONE 16(12), e0260944.

Enrichment of rearing environment with natural elements has been suggested to improve the welfare and post-release survival of cultured fish. We studied the combined effects of shelter structures, periodical water flow and water level changes...

Fernandez, E. J., Myers, M., Hawkes, N. C. 2021. The effects of live feeding on swimming activity and exhibit use in zoo Humboldt penguins (Spheniscus humboldti). Journal of Zoological and Botanical Gardens 2(1), 88–100.

Penguins are considered among the most popular animals for zoo and aquarium visitors to observe. Swimming is considered a desirable activity, both for the visitor experience and the welfare of the penguins. However, little is...

Kalafut, K. L., Kinley, R. 2020. Using radio frequency identification for behavioral monitoring in little blue penguins. Journal of Applied Animal Welfare Science 23(1), 62-73.

A common goal of captive animal institutions is to create environments that allow for the most naturalistic behavior from their animals. Behavioral data is often used as a measure of how an animal is thriving...

Mendonça Soares, S., Kirsten, K., Pompermaier, A. et al. 2020. Sex segregation affects exploratory and social behaviors of zebrafish according to controlled housing conditions. Physiology & Behavior 222, 112944.

Zebrafish has become an animal model in research and articles have established ideal conditions for their maintenance. However, little is known regarding the influence of gender and other cues on zebrafish behavior. Thus, here we...

Krueger, L. D., Thurston, S. E., Kirk, J. et al. 2020. Enrichment preferences of singly housed zebrafish (Danio rerio). JAALAS 59(2), 148–155.

Despite the increasing popularity of zebrafish (Danio rerio) as an animal model, the environmental enrichment preferences of this species have been largely unexplored. We sought to determine the preferences of mature female zebrafish that were...

Fanning, L., Larsen, H., Taylor, P. S. 2020. A preliminary study investigating the impact of musical concerts on the behavior of captive Fiordland penguins (Eudyptes pachyrhynchus) and collared peccaries (Pecari tajacu). Animals 10(11), 2035.

Captive animal welfare is important for establishments that exhibit species for education, conservation, and research. However, captive animals are often exposed to a number of potential stressors, such as visitors and anthropogenic noise. We aimed...

Tan, S. L. T., Handasyde, K. A., Rault, J.-L. et al. 2020. Insensitivity to reward shifts in zebrafish (Danio rerio) and implications for assessing affective states. Animal Cognition 23(1), 87–100

Theory and empirical findings predict that individuals in a negative affective state are more sensitive to unexpected reward loss and less sensitive to unexpected reward gain compared to individuals in a neutral or positive affective...

Arechavala-Lopez, P., Saraiva, J. L. 2019. Welfare of Cultured and Experimental Fishes. Basel, Switzerland: MDPI, 132 pages.

This open access book is a printed edition of the Special Issue on Welfare of Cultured and Experimental Fishes that was published in the journal Fishes. The PDF is free for download.

Woodward, M. A., Winder, L. A., Watt, P. J. 2019. Enrichment increases aggression in zebrafish. Fishes 4(1), 22.

Environmental enrichment, or the enhancement of an animal’s surroundings when in captivity to maximise its wellbeing, has been increasingly applied to fish species, particularly those used commercially. Laboratory species could also benefit from enrichment, but...

DePasquale, C., Fettrow, S., Sturgill, J. et al. 2019. The impact of flow and physical enrichment on preferences in zebrafish. Applied Animal Behaviour Science 215, 77-81.

Environmental enrichment is used extensively to improve the welfare of animals in captivity, however, the importance of physical exercise as enrichment is only now coming to light. A key question in assessing the welfare of...

Lee, C. J., Paull, G. C., Tyler, C. R. 2019. Effects of environmental enrichment on survivorship, growth, sex ratio and behaviour in laboratory maintained zebrafish Danio rerio. Journal of Fish Biology 94(1), 86-95.

Environmental enrichment involves increasing the complexity of a fish's environment in order to improve welfare. Researchers are legally obliged to consider the welfare of laboratory animals and poor welfare may result in less robust data...

Solås, M. R., Skoglund, H., Salvanes, A. G. V. 2019. Can structural enrichment reduce predation mortality and increase recaptures of hatchery-reared Atlantic salmon Salmo salar L. fry released into the wild? Journal of Fish Biology 95(2), 575-588.

Captive-reared fish often have poor survival in the wild and may fail to boost threatened populations. Enrichment during the nursery period can in some circumstances generate a broader behavioural repertoire than conventional hatchery production. Yet...

Jones, N. A. R., Spence, R., Jones, F. A. M. et al. 2019. Shade as enrichment: Testing preferences for shelter in two model fish species. Journal of Fish Biology 95(4), 1161-1165.

We compared preferences shown by zebrafish (Danio rerio) and three-spined stickleback (Gasterosteus aculeatus) for shelter provided by above-tank shade and artificial plants. Zebrafish showed no preference for either shelter, whereas sticklebacks showed a preference for...

Fernandez, E. J., Kinley, R. C., Timberlake, W. 2019. Training penguins to interact with enrichment devices for lasting effects. Zoo Biology 38(6), 481-489.

The modern zoo has brought about two major advances in the behavioral welfare of their exhibited animals: (a) The use of environmental enrichment to promote naturalistic behaviors and (b) the use of training to improve...

Cox, R. J., Nol, P., Ellis, C. K. et al. 2019. Research with agricultural animals and wildlife. ILAR Journal 60(1), 66-73.

In fiscal year 2016, agricultural animals such as swine, sheep, goats, and cattle represented 10% of the 820 812 animals used in USDA-regulated research. In addition to traditional agricultural animals, research studies using captive wildlife...

Graham, C., von Keyserlingk, M. A. G., Franks, B. 2018. Free-choice exploration increases affiliative behaviour in zebrafish. Applied Animal Behaviour Science 203, 103-110.

Cognitive stimulation has been shown to be rewarding and capable of eliciting positive emotions in several species. In contrast to the abundant learning and exploration opportunities available in nature, captive environments can be under-stimulating—with the...

Graham, C., von Keyserlingk, M. A. G., Franks, B. 2018. Zebrafish welfare: Natural history, social motivation and behaviour. Applied Animal Behaviour Science 200, 13-22.

Zebrafish are now one of the most used animal model species in scientific research worldwide. Our current knowledge of wild zebrafish is limited to an estimated range of their natural habitats and their tendencies to...

Lee, C. J., Tyler, C. R., Paull, G. C. et al. 2018. Can simple tank changes benefit the welfare of laboratory zebrafish Danio rerio? Journal of Fish Biology 92(3), 653-659.

This study examined the effects of simple changes in the tank environment on the wellbeing of laboratory-maintained zebrafish Danio rerio. Groups of D. rerio were either housed in stable environments (where they were maintained in...

Volgin, A. D., Yakovlev, O. V., Demin, K. A. et al. 2018. Understanding the role of environmental enrichment in zebrafish neurobehavioral models. Zebrafish 15(5), 425-432.

Environmental stimuli are critical in preclinical research that utilizes laboratory animals to model human brain disorders. The main goal of environmental enrichment (EE) is to provide laboratory animals with better choice of activity and greater...