Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Dawkins, M. S. 2024. Active walking in broiler chickens: A flagship for good welfare, a goal for smart farming and a practical starting point for automated welfare recognition. Frontiers in Veterinary Science 10.

Automated assessment of broiler chicken welfare poses particular problems due to the large numbers of birds involved and the variety of different welfare measures that have been proposed. Active (sustained, defect-free) walking is both a...

Golledge, H., Richardson, C. (Eds.) 2024. The UFAW Handbook on the Care and Management of Laboratory and Other Research Animals (9th ed.). Wiley-Blackwell. 1040 p.

The latest edition of the seminal reference on the care and management of laboratory and research animals. The newly revised ninth edition of The UFAW Handbook on the Care and Management of Laboratory and Other...

Alig, B. N., Ferket, P. R., Malheiros, R. D. et al. 2023. The effect of housing environment on commercial brown egg layer production, USDA grade and USDA size distribution. Animals 13(4), 694

Consumer demand for retail cage-free eggs is driving the layer industry towards greater use of extensive housing environments. However, there is limited research on how these environments affect egg production characteristics of brown egg layers...

Howell-Stephens, J., Potratz, E. J., Brown, J. S. et al. 2023. Integrating measures of fecal glucocorticoid metabolites and giving-up densitites to assess adrenocortical activity and well-being in zoo-housed three-banded armadillos. Animals 13(12), 1975.

To monitor adrenocortical activity in zoo-housed species, we propose using physiological and behavioral indicators that are non-invasive and practical to implement. We explore this model in the southern three-banded armadillo (Tolypeutes matacus; armadillo), which is...

Goodenough, A. E., Sewell, A., McDonald, K. 2023. Behavioural patterns in zoo-housed Humboldt penguins (Spheniscus humboldti) revealed using long-term keeper-collected data: Validation of approaches and improved husbandry. Applied Animal Behaviour Science 258, 105811.

Given the increasing obligation to elevate animal welfare beyond minimum expectations, zoos need robust mechanisms to monitor physical activity and species-appropriate behaviours. This is not without challenge as animal behaviour can vary seasonally or be...

Beer, H. N., Karr, L. K., Shrader, T. C. et al. 2023. Allostatic load index effectively measures chronic stress status in zoo-housed giraffes. Journal of Zoological and Botanical Gardens 4(3), 623–636.

For giraffes, few standardized methods exist for quantifying chronic stress. Allostatic load index is quantified from a panel of multi-system stress biomarkers to estimate cumulative stress. Our objective was to determine whether a panel of...

Brando, S., Norman, M. 2023. Handling and training of wild animals: Evidence and ethics-based approaches and best practices in the modern zoo. Animals 13(14), 2247.

There is an ethical responsibility to provide all animals living in human care with optimal and positive well-being. As animals living in zoos and aquariums frequently interact with their human caregivers as part of their...

Campbell-Ward, M. 2023. Quality-of-life assessments in zoo animals: Not just for the aged and charismatic. Animals 13(21), 3394

Zoos should aim to provide all of their animals with a good quality of life (QoL) throughout all life stages. In parallel with the evolution of QoL assessment questionnaires and tools in human and domestic...

Goma, A. A., Uddin, J., Kieson, E. 2023. Lateralised behavioural responses in livestock to environmental stressors: Implications for using infrared thermography to assess welfare conditions. Animals 13(23), 3663.

Lateralised behavioural responses to environmental stressors have become more frequently used as indicators of social welfare in animals. These lateralised behavioural responses are under the control of asymmetrical brain functions as part of the primary...

Littlewood, K. E., Heslop, M. V., Cobb, M. L. 2023. The agency domain and behavioral interactions: Assessing positive animal welfare using the Five Domains Model. Frontiers in Veterinary Science 10.
Mählis, G., Kleine, A., Lüschow, D. et al. 2023. Clicker training as an applied refinement measure in chickens. Animals 13(24), 3836.

When using chickens in animal studies, the handling of these animals for sample collection or general examinations is considered stressful due to their prey nature. For the study presented here, plasma and salivary corticosterone as...

Rose, P. 2023. Identifying essential elements of good giraffe welfare—Can we use knowledge of a species’ fundamental needs to develop welfare-focussed husbandry? Journal of Zoological and Botanical Gardens 4(3), 549–566.

Measurement of zoo animal welfare states enables improvement to husbandry and management to be evidence-based and implemented according to species’ needs. Theoretical welfare concepts are often discussed, and whilst it is helpful to ensure wide...

Sadeghi, M., Banakar, A., Minaei, S. et al. 2023. Early detection of avian diseases based on thermography and artificial intelligence. Animals 13(14), 2348.

Non-invasive measures have a critical role in precision livestock and poultry farming as they can reduce animal stress and provide continuous monitoring. Animal activity can reflect physical and mental states as well as health conditions...

Schneidewind, S. J., Meemken, D., Langforth, S. 2023. Measures and penalties for animal welfare violations at german abattoirs: A compilation of current recommendations and practices. Animals 13(18), 2916.

Protecting animal welfare during preslaughter handling and slaughter is an important ethical concern with growing importance to consumers. However, animal welfare violations in abattoirs remain a serious problem, and the enforcement of relevant laws and...

Wang, Y., Wei, W., Yuan, F. et al. 2023. The science underlying giant panda conservation translocations. Animals 13(21), 3332.

The giant panda (Ailuropoda melanoleuca) is the flagship species of animal conservation worldwide, and the number of captive pandas reached 673 in 2021. According to the Fourth National Survey Report on the Giant Panda, there...

English, H., Harvey, L., Wilson, R. et al. 2023. Multi-sensor biologgers and innovative training allow data collection with high conservation and welfare value in zoos. Journal of Zoo and Aquarium Research 11(1), 220–231.

Zoos are valuable resources for research, allowing scientists to observe rare and elusive species. Animal-attached loggers (biologgers) offer profound insight into animal behaviour. Their use in zoos has great yet largely untapped potential to collect...

Mitin, H., Idrus, Z., Meng, G. Y. et al. 2023. Effects of positive human contact on fear and physiological stress responses in Pekin ducks (Anas platyrhynchos domesticus) subjected to crating and transport. Applied Animal Behaviour Science 269, 106108.

A growing body of research shows that farm animals frequently seek and enjoy human interaction. However, there is a lack of information on how positive human contact affects ducks’ stress and fear responses. An experiment...

Paul, E. S., Browne, W., Mendl, M. T. et al. 2022. Assessing animal welfare: A triangulation of preference, judgement bias and other candidate welfare indicators. Animal Behaviour 186, 151-177.

To assess the welfare of captive animals, validated measures, so-called ‘welfare indicators’, are required. We used a triangulation approach to investigate the extent to which different measures converged to provide corroborating evidence of welfare. Laying...

Schütz, A. K., Krause, E. T., Fischer, M. et al. 2022. Computer vision for detection of body posture and behavior of red foxes. Animals 12(3), 233.

The behavior of animals is related to their health and welfare status. The latter plays a particular role in animal experiments, where continuous monitoring is essential for animal welfare. In this study, we focus on...

Rowe, E., Mullan, S. 2022. Advancing a “good life” for farm animals: Development of resource tier frameworks for on-farm assessment of positive welfare for beef cattle, broiler chicken and pigs. Animals 12(5), 565.

There is increasing recognition that farm animal welfare standards should ensure positive welfare, as well as prevent negative welfare. Resources that are valued by an animal and that provide opportunities to engage in motivated behaviours...

Mels, C., Niebuhr, K., Futschik, A. et al. 2022. Predictors for plumage damage and bloody lesions indicative of feather pecking in pullets reared in aviaries. Applied Animal Behaviour Science 250, 105607.

Feather pecking remains a serious problem in poultry farming. This study aimed to identify risk factors for plumage damage as a proxy for feather pecking, and the predictive value of practical animal-based parameters. Data were...

Kalnins, L., Krüger, O., Krause, E. T. 2022. Plumage and fat condition scores as well-being assessment indicators in a small passerine bird, the zebra finch (Taeniopygia guttata). Frontiers in Veterinary Science 9, 791412.

The well-being of animals kept by humans in laboratories, farms, or as pets should always be of the highest importance, and a prerequisite for this is adequate housing. To assess the potential indicators for animal...

Nguyen, T. T. H., Nguyen, T. M. D. 2022. Non-invasive assessment of physiological stress in captive common palm civets (Paradoxurus hermaphroditus) in Vietnam. Journal of Animal Behaviour and Biometeorology 10(2), 2219.

Common Palm Civet (Paradoxurus hermaphroditus) is a rare mammal appearing in South and Southeast Asia, first described in 1777. Because of the detrimental effects of stress, studying stress responses is important for this wildlife conservation...

Deacon, F., Daffue, W., Nel, P. 2022. Effective field immobilisation and capture of giraffe (Giraffa camelopardalis). Animals 12(10), 1290.

One of the highest occurrences of mortalities among giraffes (Giraffa camelopardalis) takes place during immobilisations, captures and translocations. Common mistakes, human error, unforeseen risks, the awkward anatomy and the sheer size of the animal are...

Slocum, S. K., Morris, K. L. 2022. Assessing preference in a paired-stimulus arrangement with captive vultures (Aegypius monachus). Journal of Applied Animal Welfare Science 25(4), 362-367.

Vultures play an important role in our ecosystem by filtering out bacteria and viruses harmful to humans (e.g., rabies, botulism). However, many vultures remain in human care due to skill deficits and behavioral excesses, which...