Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Golledge, H., Richardson, C. (Eds.) 2024. The UFAW Handbook on the Care and Management of Laboratory and Other Research Animals (9th ed.). Wiley-Blackwell. 1040 p.

The latest edition of the seminal reference on the care and management of laboratory and research animals. The newly revised ninth edition of The UFAW Handbook on the Care and Management of Laboratory and Other...

Kaleel, K. L., Secoura, P. L., Muñoz-Pérez, J. P. et al. 2024. Endoscopy and rectal enema for fecal collection in wild sea turtles (Chelonia mydas, Eretmochelys imbricata) in a field setting. Zoo Biology 43(1), 55–60.

Forty-seven free-ranging sea turtles (46- Chelonia mydas, 1- Eretmochelys imbricata) were examined via novel use of an endoscopy combined with a rectal enema to obtain large fecal sample volumes. The cloaca was insufflated using an...

Malmkvist, J., Díez-León, M., Christensen, J. W. 2024. Animals with various forms of abnormal behaviour differ in learning performance and use of enrichment: Evidence from farm mink. Applied Animal Behaviour Science 271, 106167.

Abnormal behaviour has been related to differences in cognitive function and reduced animal welfare. However, these associations are understudied, and little is known about how various forms of abnormal behaviour affect learning performance, stress responses...

Pallieres, C. G. D., Rose, P. E. 2023. Two’s company, three species is a crowd? A webcam-based study of the behavioural effects of mixed-species groupings in the wild and in the zoo. PLOS ONE 18(4), e0284221.

Mixed species exhibits in zoos are used to create larger, more stimulating environments to support naturalistic interactions between species. In the wild, mixed species groups are observed as having lower rates of vigilance, presumably due...

Baskir, E., Parsons, A., Elden, M. et al. 2023. Quantifying acute behavioral reactions of Bali mynas (Leucopsar rothschildi) to environmental and progressively challenging enrichment. Journal of Zoological and Botanical Gardens 4(1), 176–190.

Animals use specific behaviors and skills to overcome challenges and access resources. Environmental enrichment is provided to animals in human care to both promote species-appropriate behaviors and reduce undesired behaviors. Feather pecking in birds is...

Bruno, K., Hubbard, C., Lynch, E. 2023. Access to multiple habitats improves welfare: A case study of two zoo-housed black bears (Ursus americanus). Journal of Zoological and Botanical Gardens 4(1), 87–98.

Using various forms of enrichment, animal care specialists encourage species-specific behaviors and discourage stereotypic behaviors. Within the zoo community, bears (Ursids spp.) are commonly housed, yet are prone to exhibiting stress-related behaviors. Here, we assess...

Pretorius, Y., Eggeling, T., Ganswindt, A. 2023. Identifying potential measures of stress and disturbance during a captive to wild African elephant reintegration. PLOS ONE 18(10), e0291293.

There is increasing evidence of compromised welfare for elephants managed in captivity. Should such facilities eventually close, more elephants will need to be rehabilitated and reintegrated into the wild. The goal of such reintegration would...

Cambrelen, D., Nelson Slater, M. 2023. Case study: Modifying repetitive behavior in a polar bear (Ursus maritimus). Zoo Biology 42(3), 390–396.

Stereotypic pacing in zoo-housed carnivores has been intensively researched for decades, revealing that it is a subtly complex behavior with a highly variable etiology. While pacing can be an indicator of poor welfare, it can...

Ghavamian, Y., Minier, D. E., Jaffe, K. E. 2023. Effects of complex feeding enrichment on the behavior of captive Malayan sun bears (Helarctos malayanus). Journal of Applied Animal Welfare Science 26(4), 670–684.

All zoos grapple with challenges of keeping captive animals engaged in natural behaviors, especially for bears which prove to be among the more challenging species to keep stimulated. In captivity, a common indicator of poor...

Schilling, A.-K., Mazzamuto, M. V., Romeo, C. 2022. A review of non-invasive sampling in wildlife disease and health research: What’s new? Animals 12(13), 1719.

In the last decades, wildlife diseases and the health status of animal populations have gained increasing attention from the scientific community as part of a One Health framework. Furthermore, the need for non-invasive sampling methods...

Bernstein‐Kurtycz, L. M., Wiatroski, K. G., Leeds, A. et al. 2022. About pace: How variations in method and definition affect quantification of pacing in bears. Zoo Biology 41(4), 365-372.

Repetitive pacing behavior is exhibited by many species in zoos and is particularly prevalent in carnivores with large home ranges, such as bears. Pacing can be a behavioral indicator of poor welfare, however, understanding this...

Wood, L. 2022. Managing long-term wellness in captive sea turtles. Animal Welfare 31(4), 423–432.

Circumstances surrounding advances in stranding response and veterinary care have created a growing need for the long-term housing of captive sea turtles. However, the difficulty in recreating natural conditions in captive settings places a responsibility...

Fieschi-Méric, L., Ellis, C., Servini, F. et al. 2022. An improvement in enclosure design can positively impact welfare, reduce aggressiveness and stabilise hierarchy in captive Galapagos giant tortoises. Journal of Zoological and Botanical Gardens 3(4), 499–512.

The interest in the welfare of zoo animals, from both the public and the scientific community, has long been biased towards mammals. However, growing evidence of the complex behavioural repertoires of less charismatic animals, such...

Readyhough, T. S., Joseph, S., Davis, M. et al. 2022. Impacts of socialization on bull Asian elephant (Elephas maximus) stereotypical behavior. Journal of Zoological and Botanical Gardens 3(1), 113–130.

There is a growing need for animal care institutions to house multiple bull elephants as the population increases due to transfers from private ownership and the births of male offspring in managed care. Elephants in...

Ramos, J., Balasch, J. C., Tort, L. 2021. About welfare and stress in the early stages of fish. Frontiers in Veterinary Science 8, 634434.

In conclusion, the investigations carried out up to now demonstrate that during the early stages fish show high sensitivity to many types of stressors involving an array of responses to overcome alterations that could affect...

Fernandez, E. J. 2021. Appetitive search behaviors and stereotypies in polar bears (Ursus maritimus). Behavioural Processes 182, 104299.

Stereotypies in captive animals have been defined as repetitive, largely invariant patterns of behavior that serve no obvious goal or function. Stereotypies are commonly attributed to boredom or stress and are typically treated by enriching...

Glaeser, S. S., Shepherdson, D., Lewis, K. et al. 2021. Supporting zoo Asian elephant (Elephas maximus) welfare and herd dynamics with a more complex and expanded habitat. Animals 11(9), 2566.

Ensuring good health and welfare is an increasingly important consideration for conservation of endangered species, whether free-ranging or managed to varying degrees under human care. The welfare-based design of a new habitat for Asian elephants...

Saraiva, J. L., Nogueirinha, M., Teodósio, R. et al. 2021. The effect of tank cover on welfare of farmed Nile tilapia. Applied Animal Behaviour Science 241, 105396.

Welfare in aquaculture is a pressing topic. One of the main measures to improve the life of farmed fish is implementing environmental enrichment, which can include the addition of structural covers to rearing tanks. Here...

Glaspell, S. 2020. Flight to freedom: Behavior modification of an undomesticated pigeon using human interaction. Laboratory Animal Science Professional 8(2) (March/April), 58-61.

The white-crowned pigeon, Patagioenas leucocephala, is a species of bird not often used in research. This may be related to its anxiety during normal human interactions, such as with cage changing. Our institution acquired a...

Filliettaz, C., Maxwell, L., Dragon, M. et al. 2020. Novel bleeding techniques in hamsters. Laboratory Animal Science Professional 8(1) (January/February), 44-46.

Hamsters have historically been used in our pharmacokinetic (PK) studies using the retro-orbital (RO) bleeding technique to collect blood samples. If performed incorrectly, this technique has the potential for animal welfare complications not usually seen...

Zemanova, M. A. 2020. Towards more compassionate wildlife research through the 3Rs principles: Moving from invasive to noninvasive methods. Wildlife Biology 2020(1), no page numbers.

Research in ecology and wildlife biology remains crucial for increasing our knowledge and improving species management and conservation in the midst of the current biodiversity crisis. However, obtaining information on population status often involves invasive...

Schiffmann, C., Hård, T., Hjelm, M. et al. 2020. Soft and persistent—The influence of sand-flooring and calves on the resting behavior of a zoo-kept African elephant (Loxodonta africana) group. Zoo Biology 39(1), 56-62.

Caring for all aspects of zoo elephants’ well-being is considered a major challenge. Providing an appropriate flooring substrate to facilitate lying rest presents a meaningful part of a holistic management concept. Investigating the impact of...

Wendler, P., Ertl, N., Flügger, M. et al. 2020. Influencing factors on the foot health of captive Asian elephants (Elephas maximus) in European zoos. Zoo Biology 39(2), 109-120.

Pathological lesions of feet occur frequently in captive elephant populations. To improve foot health, it is important to identify risk factors associated with such pathologies. Several previous studies have analyzed potentially influencing factors but were...

Hammond, C. 2020. Comparing the frequency of stereotypical and non-stereotypical behaviours in captive brown bears (Ursus arctos arctos) at The Wildwood Trust. RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 47(1), 4-7.

Zoos play an important role in conservation, participating in captive breeding programmes and scientific research. The research can be shared and inform practice in the field and zoos. A behavioural observation study was conducted on...

Brown, J. L., Bansiddhi, P., Khonmee, J. et al. 2020. Commonalities in management and husbandry factors important for health and welfare of captive elephants in North America and Thailand. Animals 10(4), 737.

This review paper is a synthesis of results from multiple studies that we have conducted over the past several years using similar methodologies to identify factors related to welfare of captive populations of elephants in...