Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Silva, P. F., Garcia de Leaniz, C., Freire, F. A. M. et al. 2023. Different housing conditions for zebrafish: What are the effects? Behavioural Processes 209, 104886.

Zebrafish is a popular experimental model in several research areas but little is known about the effects of using different strains or housing conditions. Poor control of genetic background and housing conditions could affect experimental...

Brando, S., Norman, M. 2023. Handling and training of wild animals: Evidence and ethics-based approaches and best practices in the modern zoo. Animals 13(14), 2247.

There is an ethical responsibility to provide all animals living in human care with optimal and positive well-being. As animals living in zoos and aquariums frequently interact with their human caregivers as part of their...

Buenhombre, J., Daza-Cardona, E. A., Sousa, P. et al. 2023. Structural environmental enrichment and the way it is offered influence cognitive judgement bias and anxiety-like behaviours in zebrafish. Animal Cognition 26(2), 563–577.

Environmental enrichment in zebrafish generally reduces anxiety-related behaviours, improves learning in maze trials and increases health and biological fitness. However, certain types of enrichment or certain conditions induce the opposite effects. Therefore, it is essential...

Campbell-Ward, M. 2023. Quality-of-life assessments in zoo animals: Not just for the aged and charismatic. Animals 13(21), 3394

Zoos should aim to provide all of their animals with a good quality of life (QoL) throughout all life stages. In parallel with the evolution of QoL assessment questionnaires and tools in human and domestic...

Cooper, D. M., Yamaguchi, N., Macdonald, D. W. et al. 2023. Getting to the meat of it: The effects of a captive diet upon the skull morphology of the lion and tiger. Animals 13(23), 3616.

Zoo animals are crucial for conserving and potentially re-introducing species to the wild, yet it is known that the morphology of captive animals differs from that of wild animals. It is important to know how...

Mair, A., Dadda, M., Kitaoka, A. et al. 2023. Illu-shoal choice: An exploration of different means for enrichment of captive zebrafish. Animals 13(16), 2640.

Fish of any variety are nowadays being kept captive for several purposes, from recreational to alimentary to research. It is possible that we humans often underestimate or misunderstand the basic, natural needs of the species...

Martens, L. L., Piersanti, S. J., Berger, A. et al. 2023. The effects of onychectomy (declawing) on antebrachial myology across the full body size range of exotic species of felidae. Animals 13(15), 2462.

While people are familiar with the practice of declawing domestic cats, “onychectomy”, as it is also known, is also performed on non-domesticated species, including pantherines, to prolong their use for entertainment purposes. Although the surgery...

Palomares, F., de Paula, T. A. R., Srbek-Araujo, A. C. 2023. First capture of a jaguar using a minimally invasive capture system for gps tracking in an isolated patch of atlantic forest in southern Brazil. Animals 13(21), 3314.

This study presents the first successful capture using GPS tagging of a jaguar (Panthera onca) using a minimally invasive capture system (MICS). We used snare-foot traps and a MICS during two capture campaigns in a...

Smith, S. A. 2023. Fish welfare in public aquariums and zoological collections. Animals 13(16), 2548.

A wide variety of fish species have been displayed in public aquariums and zoological collections for over 150 years. Though the issue of pain perception in fish is still being debated, there is no disagreement...

Ramezani-Fard, E. 2023. Zebrafish nutrition: Everything known and to be known. Laboratory Animal Science Professional 11(1) (January/February), 30-32.

Despite the widespread use of zebrafish (Danio rerio) as a research animal in many studies including toxicologic and biomedical research, the nutritional requirements of this species have yet to be determined. Several aquafeed companies currently...

Wood, H., Voros, G. B. 2023. Increasing the psychological wellbeing of zebrafish (Danio rerio) and African clawed frogs (Xenopus laevis) at the Cleveland Clinic. Laboratory Animal Science Professional 11(6) (November/December), 38-40.

With the increased use of aquatic animals in research, especially zebrafish and African clawed frogs, there has been an increased interest in how to best address their psychological wellbeing. In this article, we have shown...

Breitenbach, R., Ambros, S., Risko, G. et al. 2023. The importance of auditory, olfactory, and visual cues for insect foraging in owl monkeys (Aotus nancymaae). American Journal of Primatology 85(10), e23539.

Nocturnal mammals have unique sensory adaptations to facilitate foraging at night. Owl monkeys (Aotus spp.) are pair-living nocturnal platyrrhines adept at capturing insect prey under low-light conditions. Owl monkeys use acoustic and chemical cues in...

Camson, C. T., Palillo, J. A., Fehrenbach, L. A. et al. 2023. Evaluation of disinfection methods for artificial plants in zebrafish (Danio rerio) recirculating water systems. JAALAS 62(6), 512–517.

The use of artificial plants as environmental enrichment for zebrafish (Danio rerio) in biomedical research facilities has been shown to provide benefits in animal welfare and care. Despite the benefits of artificial plants to zebrafish...

Gallas-Lopes, M., Benvenutti, R., Donzelli, N. I. Z. et al. 2023. A systematic review of the impact of environmental enrichment in zebrafish. Lab Animal 52(12), 332-343.

Environmental enrichment (EE) consists of a series of interventions carried out in the home environment to promote greater exposure to sensory stimuli and mimic the natural habitat of laboratory-housed animals, providing environments closer to those...

Kleinlugtenbelt, C., Clauss, M., Burkevica, A. et al. 2023. Fasted and furious? Considerations on the use of fasting days in large carnivore husbandry. Journal of Zoo and Aquarium Research 11(3), 318–323.

Many large mammalian terrestrial carnivores do not hunt every day in their natural habitats, because given the right prey, they can gorge-feed more than their daily energy and nutrient requirements. At the same time, there...

Lavery, J. M., Mason, G. J. 2023. Mirror, mirror on the wall… How tank material and the presence of “enrichments” affect competition and agonism in zebrafish (Danio rerio). Applied Animal Behaviour Science 266, 106005.

Despite generations of rearing in a laboratory environment, zebrafish (Danio rerio) retain innate preferences for environmental features that mimic their natural habitat (e.g. plants and gravel), but the effects of such preferred housing conditions on...

Marzio, A. D., Birbele, E., Šķērstiņa, R. 2023. Wanted dead or alive: Ethics and animal welfare in food choice. Journal of Zoo and Aquarium Research 11(4), 351–355.

The use of live food in zoological collections is a constant source of debate, with multiple approaches to discussions of implementation. The debate can be divided between those ‘internal’ (professionals within captive care) and ‘external’...

Miller, S. L., Leri, F., Pushinsky, A. et al. 2023. Zebrafish (Danio rerio) distinguish between two human caretakers and their associated roles within a captive environment. Applied Animal Behaviour Science 267, 106053.

Zebrafish have become a popular biomedical model in recent decades, and are now maintained in laboratories worldwide. However, living within a captive environment can introduce novel environmental stressors and experiencing stress chronically can negatively affect...

Philippe, C., Vergauwen, L., Huyghe, K. et al. 2023. Chronic handling stress in zebrafish Danio rerio husbandry. Journal of Fish Biology 103(2), 367–377.

The zebrafish (Danio rerio, Hamilton, 1822) is one of the most important fish model species in scientific research, with millions of fish housed in laboratory animal facilities around the world. During husbandry, it is necessary...

Radical, A., Normando, S., Ponzio, P. et al. 2023. The effects of the addition of two environmental enrichments on the behavior and fecal cortisol levels of three small felids species (Caracal caracal, Leptailurus serval, Leopardus pardalis) in captivity. Journal of Veterinary Behavior 60, 56–64.

Scientific evidences support the fact that environmental enrichment, when effective, can affect the behavior of animals in captivity in a way suggestive of an improvement in their quality of life. In the internationally published literature...

Shishis, S., Tsang, B., Ren, G. J. et al. 2023. Effects of different handling methods on the behavior of adult zebrafish. Physiology & Behavior 262, 114106.

The zebrafish is an important biomedical research organism. In most research, zebrafish are removed from their home tank and subsequently their phenotype is measured. The method of handling the fish, however, may significantly affect a...

Smith, K. D., Snider, R. J., Dembiec, D. P. et al. 2023. Effects of a modern exhibit design on captive tiger welfare. Zoo Biology 42(3), 371–382.

Offering captive animals larger, more complex spaces are thought to benefit their welfare. To this end, some zoos use trail systems linked to several enclosures. Since little is known about the effects of such designs...

Brereton, J., Rose, P. 2022. An evaluation of the role of 'biological evidence' in zoo and aquarium enrichment practices. Animal Welfare 31(1), 13-26.

Evidence-based approaches are key to advancing all areas of zoo and aquarium practice. Output from empirical study must be disseminated to those within the industry so that results can support changes to husbandry and management...

Vaz, J., McElligott, A. G., Narayan, E. 2022. Linking the roles of personality and stress physiology for managing the welfare of captive big cats. Animal Welfare 31(1), 99-111.

Animal welfare is important for the humane treatment of animals under our care. Zoos and rescue centres manage various charismatic animals, such as big cats, with limited resources. It is therefore essential for caretakers to...

Tuite, E. K., Moss, S. A., Phillips, C. J. et al. 2022. Why are enrichment practices in zoos difficult to implement effectively? Animals 12(5), 554.

The good intentions of zoos to introduce enrichment practices that stimulate animals mentally and physically are not always achievable. Changes to the policies and procedures in organisations are difficult to fulfil for a range of...