Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Rashid, M., Silventoinen, A., Gleerup, K. B. et al. 2020. Equine Facial Action Coding System for determination of pain-related facial responses in videos of horses. PLOS ONE 15(11), e0231608.

During the last decade, a number of pain assessment tools based on facial expressions have been developed for horses. While all tools focus on moveable facial muscles related to the ears, eyes, nostrils, lips, and...

Ask, K., Rhodin, M., Tamminen, L.-M. et al. 2020. Identification of body behaviors and facial expressions associated with induced orthopedic pain in four equine pain scales. Animals 10(11), 2155.

Equine orthopedic pain scales are targeted towards horses with moderate to severe orthopedic pain. Improved assessment of pain behavior and pain-related facial expressions at rest may refine orthopedic pain detection for mild lameness grades. Therefore...

Miller, L. J., Vicino, G. A., Sheftel, J. et al. 2020. Behavioral diversity as a potential indicator of positive animal welfare. Animals 10(7), 1211.

Modern day zoos and aquariums continuously assess the welfare of their animals and use evidence to make informed management decisions. Historically, many of the indicators of animal welfare used to assess the collection are negative...

Orth, E. K., Navas González, F. J., Iglesias Pastrana, C. et al. 2020. Development of a donkey grimace scale to recognize pain in donkeys (Equus asinus) post castration. Animals 10(8), 1411.

The objectives of this study were to establish a donkey ethogram, followed by a donkey grimace scale to be applied to donkeys pre- and post-castration and to test if there was a notable difference in...

Taylor, P. 2020. Remote controlled nociceptive threshold testing systems in large animals. Animals 10(9), 1556.

Nociceptive threshold (NT) testing is widely used for the study of pain and its alleviation. The end point is a normal behavioural response, which may be affected by restraint or unfamiliar surroundings, leading to erroneous...

van Loon, J., Verhaar, N., van den Berg, E. et al. 2020. Objective assessment of acute pain in foals using a facial expression-based pain scale. Animals 10(9), 1610.

Pain assessment is very important for monitoring welfare and quality of life in horses. To date, no studies have described pain scales for objective assessment of pain in foals. Studies in other species have shown...

Mogil, J. S., Pang, D. S. J., Silva Dutra, G. G. et al. 2020. The development and use of facial grimace scales for pain measurement in animals. Neuroscience & Biobehavioral Reviews 116, 480-496.

The measurement of pain in animals is surprisingly complex, and remains a critical issue in veterinary care and biomedical research. Based on the known utility of pain measurement via facial expression in verbal and especially...

Butler, J. L., Kennerley, S. W. 2019. Mymou: A low-cost, wireless touchscreen system for automated training of nonhuman primates. Behaviour Research Methods 51, 2559–2572.

Training nonhuman primates (NHPs) to perform cognitive tasks is essential for many neuroscientific investigations, yet laboratory training is a time-consuming process with inherent limitations. Habituating NHPs to the laboratory staff and experimental equipment can take...

Benn, A. L., McLelland, D. J., Whittaker, A. L. 2019. A review of welfare assessment methods in reptiles, and preliminary application of the Welfare Quality® protocol to the pygmy blue-tongue skink, Tiliqua adelaidensis, using animal-based measures. Animals 9(1), 27.

Reptiles are held at wildlife parks and zoos for display and conservation breeding programs and are increasingly being kept as pets. Reliable indicators of welfare for reptiles need to be identified. Current guidelines for the...

Howell, C. P., Cheyne, S. M. 2019. Complexities of using wild versus captive activity budget comparisons for assessing captive primate welfare. Journal of Applied Animal Welfare Science 22(1), 78-96.

Activity budget comparisons between groups or individuals in the wild and those in captivity are commonly used to determine the range of wild-type behaviors that nonhuman animals in captivity perform. These comparisons are conducted with...

Raspa, F., Cavallarin, L., McLean, A. et al. 2019. A Review of the appropriate nutrition welfare criteria of dairy donkeys: Nutritional requirements, farm management requirements and animal-based indicators. Animals 9(6), 315.

Data are available in the scientific literature concerning the quality and usefulness of donkey milk for human consumption. However, there is a lack of studies related to the understanding of the welfare of dairy donkeys...

Merkies, K., Ready, C., Farkas, L. et al. 2019. Eye blink rates and eyelid twitches as a non-invasive measure of stress in the domestic horse. Animals 9(58), 62.

Physiological changes provide indices of stress responses, however, behavioural measures may be easier to determine. Spontaneous eye blink rate has potential as a non-invasive indicator of stress. Eyelid movements, along with heart rate (HR) and...

Mattiello, S., Battini, M., De Rosa, G. et al. 2019. How can we assess positive welfare in ruminants? Animals 9(10), 758.

Until now, most research has focused on the development of indicators of negative welfare, and relatively few studies provide information on valid, reliable, and feasible indicators addressing positive aspects of animal welfare. However, a lack...

Contreras-Aguilar, M. D., Henry, S., Coste, C. et al. 2019. Changes in saliva analytes correlate with horses' behavioural reactions to an acute stressor: A pilot study. Animals 9(11), 993.

Acute stress induces an array of behavioural reactions in horses that vary between individuals. Attempts to relate behavioural patterns and physiological responses have not always given clear-cut results. Here, we measured the changes in a...

Lesimple, C., Gautier, E., Benhajali, H. et al. 2019. Stall architecture influences horses’ behaviour and the prevalence and type of stereotypies. Applied Animal Behaviour Science 219, 104833.

Despite the spatial and social restrictions it causes, single stall housing still prevails in sport and riding school horses, leading to the emergence of abnormal behaviours such as stereotypic or abnormal repetitive behaviours (SB/ARB). In...

Association of Primate Veterinarians. 2019. Association of Primate Veterinarians’ Position Statement: Cerebrospinal fluid aspiration for nonhuman primates in biomedical research. JAALAS 58(4), 428-429.

The Association of Primate Veterinarians (APV) recognizes that CSF collection may be required for both clinical and research purposes in nonhuman primates (NHP). Because there are inherent risks associated with the technique, the laboratory animal...

Ladewig, J. 2019. Body language: Its importance for communication with horses. Journal of Veterinary Behavior 29, 108-110.

Body language is important for communication between individuals. Body language is based on the fact that the thought of performing a known action, alone, will activate the motor neurons used for the action, resulting in...

Huisman, I., Van Iwaarden, S., Hughes, E. et al. 2019. Clicker training in horses; the importance of the time between click and reward. Journal of Veterinary Behavior 29, 148. (13th International Society of Equitation Science (ISES) Conference Abstract)

Timing of reward is very important when training horses. Incorrect timing can lead to confusion and deleterious behaviors and learning will be impaired. Clicker training can be used as an important tool in training. However...

Hartmann, E., Christensen, J. W., Mcgreevy, P. D. 2019. Does leadership relate to social order in groups of horses and can it be transferred to human–horse interactions? Journal of Veterinary Behavior 29, 153. (13th International Society of Equitation Science (ISES) Conference Abstract)

A prevalent, traditional approach to horse-training is based on the belief that human dominance and leadership over horses is required to gain their respect and compliance. However, this denies the horses’ complex social organisation and...

Waran, N., Randle, H., Preshaw, L. et al. 2019. Through their eyes: the challenge of assessing equine emotional state. Journal of Veterinary Behavior 29, 151. (13th International Society of Equitation Science (ISES) Conference Abstract)

Animal welfare assessment has traditionally relied on measures of physical health and changes in behavior and physiology related to negative emotional states such as pain and stress. However, it is now widely accepted that good...

Ladewig, J. 2019. Body language: its importance for communication with horses. Journal of Veterinary Behavior 29, 147-148. (13th International Society of Equitation Science (ISES) Conference Abstract)

Body language is important for communication between individuals. Body language is based on the fact that the thought, alone of performing a known action will activate the motor neurons used for the action, resulting in...

Warwick, C., Arena, P., Steedman, C. 2019. Spatial considerations for captive snakes. Journal of Veterinary Behavior 30, 37-48.

Captive environments for snakes commonly involve small enclosures with dimensions that prevent occupants from adopting straight line body postures. In particular, the commercial, hobby, and pet sectors routinely utilize small vivaria and racking systems, although...

Balansard, I., Cleverley, L., Cutler, K. L. et al. 2019. Revised recommendations for health monitoring of non-human primate colonies (2018): FELASA Working Group Report. Laboratory Animals 53(5), 429–446.

The genetic and biological similarity between non-human primates and humans has ensured the continued use of primates in biomedical research where other species cannot be used. Health-monitoring programmes for non-human primates provide an approach to...

Sénèque, E., Lesimple, C., Morisset, S. et al. 2019. Could posture reflect welfare state? A study using geometric morphometrics in riding school horses. PLOS ONE 14(2), e0211852.

Despite the fact that animal posture is known to reflect emotional state, the presence of chronic postures associated with poor welfare has not been investigated with an objective tool for measuring, quantifying and comparing postures...

Egelkamp, C. L., Ross, S. R. 2019. A review of zoo-based cognitive research using touchscreen interfaces. Zoo Biology 38(2), 220-235.

In the past few decades, there has been an increase in the number of zoo-based touchscreen studies of animal cognition around the world. Such studies have contributed to the field of comparative cognition despite the...