Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Golledge, H., Richardson, C. (Eds.) 2024. The UFAW Handbook on the Care and Management of Laboratory and Other Research Animals (9th ed.). Wiley-Blackwell. 1040 p.

The latest edition of the seminal reference on the care and management of laboratory and research animals. The newly revised ninth edition of The UFAW Handbook on the Care and Management of Laboratory and Other...

Warwick, C., Pilny, A., Steedman, C. et al. 2023. Mobile zoos and other itinerant animal handling events: Current status and recommendations for future policies. Animals 13(2), 214.

Mobile zoos are events in which non-domesticated (exotic) and domesticated species are transported to venues such as schools, hospitals, parties, and community centres, for the purposes of education, entertainment, or social and therapeutic assistance. We...

Brando, S., Norman, M. 2023. Handling and training of wild animals: Evidence and ethics-based approaches and best practices in the modern zoo. Animals 13(14), 2247.

There is an ethical responsibility to provide all animals living in human care with optimal and positive well-being. As animals living in zoos and aquariums frequently interact with their human caregivers as part of their...

Mitin, H., Idrus, Z., Meng, G. Y. et al. 2023. Effects of positive human contact on fear and physiological stress responses in Pekin ducks (Anas platyrhynchos domesticus) subjected to crating and transport. Applied Animal Behaviour Science 269, 106108.

A growing body of research shows that farm animals frequently seek and enjoy human interaction. However, there is a lack of information on how positive human contact affects ducks’ stress and fear responses. An experiment...

Houstin, A., Zitterbart, D. P., Winterl, A. et al. 2022. Biologging of emperor penguins—Attachment techniques and associated deployment performance. PLOS ONE 17(8), e0265849.

An increasing number of marine animals are equipped with biologgers, to study their physiology, behaviour and ecology, often for conservation purposes. To minimise the impacts of biologgers on the animals’ welfare, the Refinement principle from...

Mitin, H., Zulkifli, I., Che Jamri, M. H. et al. 2022. Alleviation of catching and crating stress by dietary supplementation of Bacillus subtilis in Pekin ducks. Animals 12(24), 3479.

Catching and crating may elicit stress and fear reactions in poultry because the procedures involve human contact and exposure to a novel environment. This study determined the effects of dietary probiotic supplementation on physiological stress...

Ramos, J., Balasch, J. C., Tort, L. 2021. About welfare and stress in the early stages of fish. Frontiers in Veterinary Science 8, 634434.

In conclusion, the investigations carried out up to now demonstrate that during the early stages fish show high sensitivity to many types of stressors involving an array of responses to overcome alterations that could affect...

Huber, N., Mahr, K., Tóth, Z. et al. 2021. The stressed bird in the hand: Influence of sampling design on the physiological stress response in a free-living songbird. Physiology & Behavior 238, 113488.

Despite the widely used application of standardized capture-handling protocols to collect blood and assess the physiological stress response, the actual sampling design (e.g., timing and the number of blood samples) often differs between studies, and...

Kalafut, K. L., Kinley, R. 2020. Using radio frequency identification for behavioral monitoring in little blue penguins. Journal of Applied Animal Welfare Science 23(1), 62-73.

A common goal of captive animal institutions is to create environments that allow for the most naturalistic behavior from their animals. Behavioral data is often used as a measure of how an animal is thriving...

Muvhali, P. T., Bonato, M., Engelbrecht, A. et al. 2020. Extensive human presence and regular gentle handling improve growth, survival and immune competence in ostrich chicks. Journal of Applied Animal Welfare Science 23(1), 95-107.

A total of 416 day-old ostrich chicks were randomly allocated to one of the three different husbandry practices for 3 months after hatch; HP1 (extensive human presence with gentle human voice, visual and gentle physical...

Sandgrav Bak, A., Malmkvist, J. 2020. Barren housing and negative handling decrease the exploratory approach in farmed mink. Applied Animal Behaviour Science 222, 104901.

We examined the influence of cage enrichment and different types of short-term experiences on the temperament of farmed mink. We used juvenile Palomino mink (n = 600, housed in pairs of one male and one female) in...

Boers, K. L., Allender, M. C., Novak, L. J. et al. 2020. Assessment of hematologic and corticosterone response in free-living eastern box turtles (Terrapene carolina carolina) at capture and after handling. Zoo Biology 39(1), 13-22.

Hematology is a common tool for wildlife health assessments. Manual leukocyte counts are required in reptiles, however, disagreement between quantification methods has been observed in some chelonians. This study determined agreement between two methods of...

Acharya, R., Rault, J.-L. 2020. Risk factors for feather-damaging behavior in companion parrots: A social media study. Journal of Veterinary Behavior 40, 43-49.

Studies on the etiology of behavioral problems often involve interference in the animal's routine or reliance on owners' self-reports like surveys. Gathering data from videos posted on social media, a technique coined ‘video mining’, offers...

Fuller, G., Heintz, M. R., Allard, S. 2019. Validation and welfare assessment of flipper-mounted time-depth recorders for monitoring penguins in zoos and aquariums. Applied Animal Behaviour Science 212, 114-122.

The time that penguins devote to aquatic behaviors likely has important implications for their welfare in zoos and aquariums. For decades, field researchers have used time-depth recorders (TDRs) to understand the behavior of penguins at...

Schou, T. M., Palme, R., Malmkvist, J. et al. 2019. Relocation shortly after mating does not have a major impact on stress responses and reproduction in female farm mink. Applied Animal Behaviour Science 214, 89-94.

On farm, female mink are exposed to acute stressors multiple times due to handling, capturing and transport with restricted movement being a typical part of the mating procedure. We hypothesised that no relocation (group NON...

Madureira, T. V., Costa, J. L., Malhão, F. et al. 2019. Design of a multi-parametric profile for assessing the acclimation period of juvenile brown trout after an acute transport to new housing environment. Applied Animal Behaviour Science 219, 104835.

Fish batches are often transported from aquacultures to laboratory facilities, and this fact triggers a pre-stressed condition that can cause alterations in both physiological and behavioural status of animals. The acclimation before fish trials is...

Watz, J. 2019. Structural complexity in the hatchery rearing environment affects activity, resting metabolic rate and post-release behaviour in brown trout Salmo trutta. Journal of Fish Biology 95(2), 638-641.

The effects of structural enrichment in the hatchery rearing environment of brown trout Salmo trutta was linked to post-release performance. Enrichment resulted in reduced swimming activity scored in an open field test and reduced movement...

Eichner, M., Garcia, K. 2019. Increase in morbidity and mortality in a shipment of red-eared slider turtles (Trachemys scripta elegans). Laboratory Animals 53(6), 634–640.

A cohort of captive-bred red-eared slider turtles, Trachemys scripta, was received from a commercial vendor. Shortly after arrival, several turtles presented as lethargic with subjectively pale skin and multifocal areas of cotton-like tufts in the...

Cox, R. J., Nol, P., Ellis, C. K. et al. 2019. Research with agricultural animals and wildlife. ILAR Journal 60(1), 66-73.

In fiscal year 2016, agricultural animals such as swine, sheep, goats, and cattle represented 10% of the 820 812 animals used in USDA-regulated research. In addition to traditional agricultural animals, research studies using captive wildlife...

Stevens, C. 2019. Refining handling for small laboratory fishes. Animal Technology and Welfare 18(3), 191-193.

Fishes in captivity, such as those used in laboratory research, may experience handling on a regular basis. In the laboratory, handling is usually done with dip-nets, and involves pursuit, confinement and capture and removal of...

Buijs, S., Booth, F., Richards, G. et al. 2018. Behavioural and physiological responses of laying hens to automated monitoring equipment. Applied Animal Behaviour Science 199, 17-23.

Automated monitoring of behaviour can offer a wealth of information in circumstances where observing behaviour is difficult or time consuming. However, this often requires attaching monitoring devices to the animal which can alter behaviour, potentially...

Kittelsen, K. E., Granquist, E. G., Aunsmo, A. L. et al. 2018. An evaluation of two different broiler catching methods. Animals 8(8), 141.

Catching is the first step in the pre-slaughter chain for broiler chickens. The process may be detrimental for animal welfare due to the associated handling. The aim of this pilot study was to compare two...

Muvhali, P. T., Bonato, M., Engelbrecht, A. et al. 2018. The effect of extensive human presence at an early age on stress responses and reactivity of juvenile ostriches towards humans. Animals 8(10), 175.

The effect of extensive human presence and regular gentle handling performed at an early age (0–3 months old) on stress responses and reactivity of juvenile ostriches towards humans was investigated. A total of 416 ostrich...

Edwards, G. L., Michael, J. A., Parks., A. 2018. Agricultural animals as biomedical models: Occupational health and safety considerations. ILAR Journal 59(2), 161-167.

The use of agricultural animals in biomedical research is increasing. Their overall size and metabolic rate, organ size, longer gestation period, and other physiological similarities make them good candidates for animal models of human disease...

O’Rourke, D. P., Baccanale, C. L., Stoskopf, M. K. 2018. Nontraditional laboratory animal species (cephalopods, fish, amphibians, reptiles, and birds). ILAR Journal 59(2), 168-176.

Aquatic vertebrates and cephalopods, amphibians, reptiles, and birds offer unique safety and occupational health challenges for laboratory animal personnel. This paper discusses environmental, handling, and zoonotic concerns associated with these species.