Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Association of Primate Veterinarians. 2019. Association of Primate Veterinarians’ Position Statement: Cerebrospinal fluid aspiration for nonhuman primates in biomedical research. JAALAS 58(4), 428-429.

The Association of Primate Veterinarians (APV) recognizes that CSF collection may be required for both clinical and research purposes in nonhuman primates (NHP). Because there are inherent risks associated with the technique, the laboratory animal...

Eichner, M., Garcia, K. 2019. Increase in morbidity and mortality in a shipment of red-eared slider turtles (Trachemys scripta elegans). Laboratory Animals 53(6), 634–640.

A cohort of captive-bred red-eared slider turtles, Trachemys scripta, was received from a commercial vendor. Shortly after arrival, several turtles presented as lethargic with subjectively pale skin and multifocal areas of cotton-like tufts in the...

Marinath, L., Vaz, J., Kumar, D. et al. 2019. Drivers of stereotypic behaviour and physiological stress among captive jungle cat (Felis chaus Schreber, 1777) in India. Physiology & Behavior 210, 112651.

Zoos play a vital role in managing and conserving a wide range of threatened species and in enhancing their populations in natural habitats through captive breeding and reintroduction programmes. Most small felids are poor breeders...

Edwards, K. L., Miller, M. A., Carlstead, K. et al. 2019. Relationships between housing and management factors and clinical health events in elephants in North American zoos. PLOS ONE 14(6), e0217774.

Elephants experience a number of health issues that can contribute to their well-being and survival. In managed populations, housing conditions and management practices can influence individual health, so potential risk factors associated with morbidity or...

Brown, J. L., Carlstead, K., Bray, J. D. et al. 2019. Individual and environmental risk factors associated with fecal glucocorticoid metabolite concentrations in zoo-housed Asian and African elephants. PLOS ONE 14(9), e0217326.

A recent large-scale welfare study in North America involving 106 Asian (Elephas maximus) and 131 African (Loxodonta africana) elephants at 64 accredited facilities identified links (i.e., risk factors) between zoo environmental factors and a number...

Kalliokoski, O., Jellestad, F. K., Murison, R. 2019. A systematic review of studies utilizing hair glucocorticoids as a measure of stress suggests the marker is more appropriate for quantifying short-term stressors. Scientific Reports 9, 11997.

Quantitating glucocorticoids (GCs) in hairs is a popular method for assessing chronic stress in studies of humans and animals alike. The cause-and-effect relationship between stress and elevated GC levels in hairs, sampled weeks later, is...

Cox, R. J., Nol, P., Ellis, C. K. et al. 2019. Research with agricultural animals and wildlife. ILAR Journal 60(1), 66-73.

In fiscal year 2016, agricultural animals such as swine, sheep, goats, and cattle represented 10% of the 820 812 animals used in USDA-regulated research. In addition to traditional agricultural animals, research studies using captive wildlife...

Robinson, P., Trim, S., Trim, C. 2019. Non-invasive extraction of Cnidarian venom through the use of autotomised tentacles. Animal Technology and Welfare 18(3), 167-173.

The animals contained within the phylum Cnidaria (Sea Anemones, Corals, Sea Pens, Jellyfish, Boxjellies and Hydra) have origins that can be dated back to around 750 million years ago (mya) and as such, they represent...

Cooke, G. M., Tonkins, B. M., Mather, J. A. 2019. Care and enrichment for captive cephalopods. In: The Welfare of Invertebrate Animals. Carere, C., Mather, J. (eds), 179-208. Springer, Cham.

Cephalopods have become an archetype for invertebrate cognition, sentience and welfare studies. Their convergence with so-called ‘higher’ vertebrates (birds, mammals) in memory, learning, problem-solving, tool use and likely sentience has made biologists completely rethink the...

Garrido, C., Nanetti, A. 2019. Welfare of managed honey bees. In: The Welfare of Invertebrate Animals. Carere, C., Mather, J. (eds), 69-104. Springer, Cham.

Honey bee (Apis mellifera) colonies are “superorganisms”. Individual bees do not display the complete behavioural and ecological range of the species. With its caste structure and division of labour, the colony acts as a functional...

Kralj-Fišer, S., Gregorič, M. 2019. Spider welfare. In: The Welfare of Invertebrate Animals. Carere, C., Mather, J. (eds), 105-122. Springer, Cham.

Spiders with around 48,000 recorded species are major terrestrial predators and thus crucially important for ecosystem functioning. They are widely used as research models and for biodiversity displays and sometimes also kept as pets. Nevertheless...

Höttges, N., Hjelm, M., Hård, T. et al. 2019. How does feeding regime affect behaviour and activity in captive African lions (Panthera leo)? Journal of Zoo and Aquarium Research 7(3), 117-125.

Lions (Panthera leo) are popular zoo animals and obligate carnivores. In the past, zoos focused on the nutritional aspect of feeding, whereas today they aim to encourage naturalistic feeding. AZA’s Lion Care Manual recommends a...

Schiffmann, C., Clauss, M. 2019. Impact of a new exhibit on stereotypic behavior in an elderly captive African elephant. Journal of Zoo and Aquarium Research 7(1), 37-43.

Stereotypic behavior in zoo elephants is considered an indicator of impaired welfare. The underlying causes are diverse and many aspects are still unexplored. Nevertheless, many zoological institutions take huge efforts to improve the well-being of...

Wark, J. D., Cronin, K. A., Niemann, T. et al. 2019. Monitoring the behavior and habitat use of animals to enhance welfare using the zoomonitor app. Animal Behavior and Cognition 6(3), 158–167.

Regular monitoring of the behavior, habitat use, and appearance of animals can provide valuable insight into their welfare. These ongoing data can help identify meaningful trends that can be acted upon to enhance welfare, and...

Hacker, C. E., Miller, L. J., Schulte, B. A. 2018. Examination of enrichment using space and food for African elephants (Loxodonta africana) at the San Diego Zoo Safari Park. Animal Welfare 27(1), 55-65.

Concern for elephant welfare in zoological facilities has prompted a number of exhibit and management modifications, including those involving enrichment. Knowledge of how these changes impact indicators of welfare, such as elephant movement and behaviour...

Deurinck, M., Schindler, S., Bugnon, P. et al. 2018. Report from the 2017 Annual SGV (Swiss Laboratory Animal Science Association ) Meeting. Laboratory Animals 52(2), 211-213. [Meeting Report]

The Scientific Committee of the Swiss Laboratory Animal Science Association (Schweizerische Gesellschaft für Versuchstierkunde, SGV) reports on the Annual SGV Meeting held on 28 and 29 November 2017, at Technopark, Zürich, Switzerland. Feedback after the...

Bacon, H. 2018. Behaviour-based husbandry—A holistic approach to the management of abnormal repetitive behaviors. Animals 8(7), 103.

The field of zoo animal welfare science has developed significantly over recent years. However despite this progress in terms of scientific research, globally, zoo animals still face many welfare challenges. Recently, animal welfare frameworks such...

Krebs, B., Marrin, D., Phelps, A. et al. 2018. Managing aged animals in zoos to promote positive welfare: A review and future directions. Animals 8(7), 116.

Improvements in veterinary care, nutrition, and husbandry of animals living in zoos have led to an increase in the longevity of these animals over the past 30 years. In this same time period, the focus...

Beamish, G., Chapman, C., Lomax, A. 2018. Design by intravenous injection in the Syrian hamster. Animal Technology and Welfare 17(2), 124-125.

Repeated injections in rats and mice are typically done via the tail vein. For hamsters, the tail is not an option. In this paper we explore the development and refinement of IV dosing in the...

Baker, S., Knight, E., Pellett, S. et al. 2018. Spider and chips: The use of internal Radio Frequency Identification (RFID) chips as a minimally invasive method to measure internal body temperatures in invertebrates. Animal Technology and Welfare 17(1), 1-7.

Internal RFID transponders have been used in vertebrates for many years, however studies into their use in invertebrates are less well represented in the literature. The use of RFID transponders for internal temperature measurement represents...

Nielsen, B. L. 2018. Making sense of it all: The importance of taking into account the sensory abilities of animals in their housing and management. Applied Animal Behaviour Science 205, 175-180.

In this selective review, examples are given of how different animal species use different sensory modalities in different ways. These examples serve to illustrate that we should not forget to take sensory abilities of the...

Clay, A. W., Crane, M., Merino, R. et al. 2018. Management of weight and body condition for captive adult and aging chimpanzees (Pan troglodytes). American Journal of Primatology 80(S1), 33 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #66).

With the goal of finding a practical way to improve and/or maintain the body condition of overweight chimpanzees to promote health and welfare, several feeding protocols’ effects on chimpanzee body condition scores (BCS) were evaluated...

Schou, T. M., Malmkvist, J. 2018. Maternal nest building and choice of nest site are temperature dependent in mink: Parent-offspring temperature conflict? Applied Animal Behaviour Science 209, 88-98.

We investigated whether nest building and nest site preference are temperature dependent in female mink. We designed two experiments: in Experiment 1, female mink had access to unheated (7 °C, Room7C group) or heated (25...

Clay, A. W., Bard, K. A., Bloomsmith, M. A. 2018. Effects of sex and early rearing condition on adult behavior, health, and well-being in captive chimpanzees (Pan troglodytes). Behavioural Processes 156, 58-76.

Scientific evaluation of management strategies for captive species is part of the establishment of best practices for animal welfare. Here we report the effects of sex, rearing, and a sex-by-rearing interaction on adult, captive chimpanzees’...

Brando, S., Buchanan-Smith, H. M. 2018. The 24/7 approach to promoting optimal welfare for captive wild animals. Behavioural Processes 156, 83-95.

We have an ethical responsibility to provide captive animals with environments that allow them to experience good welfare. Husbandry activities are often scheduled for the convenience of care staff working within the constraints of the...