Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Lambert, H., Cornish, A., Waley, D. 2024. The value of regulating stocking densities in aquaculture must not be dismissed: A reply to Saraiva et al. 2022. Frontiers in Veterinary Science 10.

We would like to rebut the argument made by Saraiva et al. (1) in their paper “Finding the “golden stocking density”: a balance between fish welfare and farmers' perspectives,” that stocking densities should not be...

Copelin, C., Hayman, B., Bergeron, R. et al. 2024. Compliance or confusion? The usefulness of blindfolding horses as a handling technique. Applied Animal Behaviour Science 271, 106180.

Blindfolds have commonly been suggested to make horses more tractable in emergency or high-stress situations such as barn fire evacuations or trailer loading. However, little research has been done on the veracity of this claim...

Harvey, A. M., Beausoleil, N. J., Ramp, D. et al. 2023. Mental experiences in wild animals: Scientifically validating measureable welfare indicators in free-roaming horses. Animals 13(9), 1507.

The mental experiences of animals are what characterises their welfare status. The Five Domains Model for assessing welfare aligns with the understanding that physical and mental states are linked. Following measurement of indicators within each...

Jorge, S., Félix, L., Costas, B. et al. 2023. Housing conditions affect adult zebrafish (Danio rerio) behavior but not their physiological status. Animals 13(6), 1120.

Zebrafish is a valuable model for neuroscience research, but the housing conditions to which it is exposed daily may be impairing its welfare status. The use of environmental enrichment and the refinement of methodology for...

Seganfreddo, S., Fornasiero, D., De Santis, M. et al. 2023. A pilot study on behavioural and physiological indicators of emotions in donkeys. Animals 13(9), 1466.

Recognizing animal emotions is critical to their welfare and can lead to a better relationship with humans and the environment, especially in a widespread species like the donkey, which is often prone to welfare issues...

Sen Sarma, O., Frymus, N., Axling, F. et al. 2023. Optimizing zebrafish rearing−Effects of fish density and environmental enrichment. Frontiers in Behavioral Neuroscience 17, 1204021.

Despite its popularity in research, there is very little scientifically validated knowledge about the best practices on zebrafish (Danio rerio) husbandry, which has led to several facilities having their own husbandry protocols. This study was...

Warwick, C., Pilny, A., Steedman, C. et al. 2023. Mobile zoos and other itinerant animal handling events: Current status and recommendations for future policies. Animals 13(2), 214.

Mobile zoos are events in which non-domesticated (exotic) and domesticated species are transported to venues such as schools, hospitals, parties, and community centres, for the purposes of education, entertainment, or social and therapeutic assistance. We...

Buenhombre, J., Daza-Cardona, E. A., Sousa, P. et al. 2023. Structural environmental enrichment and the way it is offered influence cognitive judgement bias and anxiety-like behaviours in zebrafish. Animal Cognition 26, 563–577.

Environmental enrichment in zebrafish generally reduces anxiety-related behaviours, improves learning in maze trials and increases health and biological fitness. However, certain types of enrichment or certain conditions induce the opposite effects. Therefore, it is essential...

Ricci-Bonot, C., Mills, D. S. 2023. Recognising the facial expression of frustration in the horse during feeding period. Applied Animal Behaviour Science 265, 105966.

Horses often present negative emotional states which are frequently poorly recognised, with much of our understanding of horse expressions based on anecdotes, rather than scientific evidence. The aim of this project was to identify potential...

Fontana, B. D., Alnassar, N., Parker, M. O. 2023. Transgenerational effects of early-life stress on anxiety behavior in zebrafish (Danio rerio). Behavioural Processes 208, 104874.

Early-life adversity impacts on anxiety-related behaviors in adulthood. The effects of such adversity not only affect the animal itself, but can be passed on transgenerationally. Pervasive effects of experimentally-induced early-life stress (ELS) have been documented...

Wang, C., Yang, C., Zeng, Y. et al. 2023. GnRH-immunocastration: An alternative method for male animal surgical castration. Frontiers in Veterinary Science 10.
Wiese, T. R., Rey Planellas, S., Betancor, M. et al. 2023. Qualitative Behavioural Assessment as a welfare indicator for farmed Atlantic salmon (Salmo salar) in response to a stressful challenge. Frontiers in Veterinary Science 10.

Animal welfare assessments have struggled to investigate the emotional states of animals while focusing solely on available empirical evidence. Qualitative Behavioural Assessment (QBA) may provide insights into an animal’s subjective experiences without compromising scientific rigor...

Dubuc, J., Morrow, L. 2023. Open versus semi-closed castration in horses: Which technique results in fewer postoperative complications? Veterinary Record 192(2), 78–78.

There is currently no peer-reviewed evidence comparing the postoperative complications associated with open and semi-closed castration techniques in horses. Therefore, the choice of technique should be based on the client's understanding of the risks and...

Philippe, C., Vergauwen, L., Huyghe, K. et al. 2023. Chronic handling stress in zebrafish Danio rerio husbandry. Journal of Fish Biology 103(2), 367–377.

The zebrafish (Danio rerio, Hamilton, 1822) is one of the most important fish model species in scientific research, with millions of fish housed in laboratory animal facilities around the world. During husbandry, it is necessary...

Shishis, S., Tsang, B., Ren, G. J. et al. 2023. Effects of different handling methods on the behavior of adult zebrafish. Physiology & Behavior 262, 114106.

The zebrafish is an important biomedical research organism. In most research, zebrafish are removed from their home tank and subsequently their phenotype is measured. The method of handling the fish, however, may significantly affect a...

Szenczi, P., Jiménez Gallardo, A., Urrutia, A. et al. 2023. Non-invasive, real-time stress measurement: Vocalization compared with thermal imaging in kittens of the domestic cat in response to social separation. Behavioural Processes 213, 104955.

Finding tools to assess the stress response which can be easily applied, are non-invasive, reliable and measured in real time is still a relevant topic in many areas of biology. Vocal characteristics and temperature of...

Barton, J. C., Didier, M. D., Silvestrini, P. et al. 2022. A noninvasive method of temperature measurement using a noncontact handheld infrared thermometer fails to correlate with rectal temperature in dogs and cats. Journal of the American Veterinary Medical Association 260(7), 752-757.

OBJECTIVE: To perform a retrospective, multicenter observational study that compares the agreement of rectal temperature with the temperature measured with noncontact infrared thermometer (NCIT) in a population of dogs and cats. ANIMALS: 168 dogs and...

Buckmaster, C. L., Levesque, D., LaFollette, M. et al. 2022. Five hot topics in refinement of nonhuman primate neuroscience research. Laboratory Animal Science Professional 10(1) (January/February), 24-26.

Members of the North American 3Rs Collaborative (NA3RsC) refinement initiative have chosen to summarize developments in five hot topics of interest: 1. Tips for welfare-friendly transport, chairing, and restraint; 2. Guidance on refining food and...

Midttun, H., Øverli, Ø., Tudorache, C. et al. 2022. Non-invasive sampling of water-borne hormones demonstrates individual consistency of the cortisol response to stress in laboratory zebrafish (Danio rerio). Scientific Reports 12(1) 6278.

Glucocorticoid (GC) stress hormones are well-known for their impact on phenotypic traits ranging from immune function to behaviour and cognition. For that reason, consistent aspects of an individual’s physiological stress response (i.e. GC responsiveness) can...

Giannetto, C., Acri, G., Pennisi, M. et al. 2022. Short communication: Use of infrared thermometers for cutaneous temperature recording: Agreement with the rectal temperature in Felis catus. Animals 12(10), 1275.

In veterinary medicine, the gold standard for assessing body temperature is rectal temperature assessment. Considering that this procedure is stressful for many species, in particular for cats, it could be clinically important to consider an...

Schnaider, M. A., Heidemann, M. S., Silva, A. H. P. et al. 2022. Cat vocalization in aversive and pleasant situations. Journal of Veterinary Behavior 55-56, 71-78.

Vocalization may transmit information from the emitting animal, including information about his or her emotional state. This study aimed to compare the vocal and the behavioral responses of domestic cats during an aversive and a...

Harvey, A. M., Ramp, D., Mellor, D. J. 2022. Review of the foundational knowledge required for assessing horse welfare. Animals 12(23), 3385.

A detailed understanding of what is usual for a species under optimal conditions is critical for identifying and interpreting different features of body function that have known impacts on animal welfare and its assessment. When...

Mason, G. J., Lavery, J. M. 2022. What is it like to be a bass? Red herrings, fish pain and the study of animal sentience. Frontiers in Veterinary Science 9, 788289.

Debates around fishes’ ability to feel pain concern sentience: do reactions to tissue damage indicate evaluative consciousness (conscious affect), or mere nociception? Thanks to Braithwaite’s research leadership, and concerns that current practices could compromise welfare...

Nagasawa, T., Kimura, Y., Masuda, K. et al. 2022. Physiological assessment of the health and welfare of domestic cats—An exploration of factors affecting urinary cortisol and oxytocin. Animals 12(23), 3330.

Physiological samples are beneficial in assessing the health and welfare of cats. However, most studies have been conducted in specialized environments, such as shelters or laboratories, and have not focused on cats living in domestic...

Naidenko, S. V., Alekseeva, G. S., Klyuchnikova, P. S. et al. 2022. Application of felid hair for non-invasive tracking of animal reproductive status and adrenal activity. Animals 12(20), 2792.

Hair can be a useful matrix to examine the hormonal status of an animal, although it is difficult to correlate the results to a specific time point. The aim of this study was to evaluate...