Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Burton, D., Burton, M. (Eds). 2017. Essential Fish Biology: Diversity, Structure and Function. Oxford University Press: Oxford, U.K., 448 pp.

This book summarizes the basic features of living fish. It is introduced by a chapter on the diversity of a group which has over 30,000 species, the largest within the vertebrates, describing the classification systems...

Roth, T. S., Bionda, T. R., Sterck, E. H. M. 2017. Recapturing the canopy: Stimulating Bornean orang-utan (Pongo pygmaeus) natural locomotion behaviour in a zoo environment. Journal of Zoo and Aquarium Research 5(1), 16-24.

Orang-utans are the largest mainly arboreal animal: wild orang-utans rarely come to the forest floor. In contrast, the locomotion behaviour of captive orang-utans encompasses more time on the ground and they spend less time on...

Winnicker, C., Gaskill, B., Garner, J. P. et al. 2016. A Guide to the Behavior & Enrichment of Laboratory Rodents. Charles River Laboratories.

Covering species-typical behavior as well as abnormal/malfunctional behavior and stereotypes observed in mice, rats, hamsters and gerbils, this is an excellent resource for those looking to implement or enhance an existing behavioral husbandry and enrichment...

Brown, C. 2015. Fish intelligence, sentience and ethics. Animal Cognition 18(1), 1-17.

Fish are one of the most highly utilised vertebrate taxa by humans; they are harvested from wild stocks as part of global fishing industries, grown under intensive aquaculture conditions, are the most common pet and...

Bode, A. E., Barber, H. 2014. Use of vinyl nonadhesive tape as an alternative for positioning rodents in small animal imaging. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 597-598. (Abstract #P185).

Specific positioning for different imaging modalities is essential in our small animal imaging core. While we have different animal holders designed to position the animal inside the MRI, additional securing of the animal to the...

Bergman, T. J., Sheehan, M. J. 2013. Social knowledge and signal in primates. American Journal of Primatology 75(7), 683-694.

Primates are notable for having a rich and detailed understanding of their social environment and there has been great interest in the evolution and function of social knowledge in primates. Indeed, primates have been shown...

Reinhardt, V. (ed.) 2013. Compassion Makes a Difference - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume III. Animal Welfare Institute, Washington, DC.

This is the third volume of discussions that took place on the Laboratory Animal Refinement & Enrichment Forum (LAREF). This forum is dedicated to the exchange of personal experiences of refining the conditions under which...

Walters, S. L., Torres-Urbano, C. J., Chichester, L. et al. 2012. The impact of huts on physiological stress: A refinement in post-transport housing of male guinea pigs (Cavia porcellus). Laboratory Animals 46(3), 220-224.

The ideal animal model would contribute no confounding variables in experimental science. Variables affect experimental design resulting in increased animal use or repeated studies. We demonstrated a simple refinement which may reduce the number of...

Blyth, L. 2012. A safe, gentle and effective method of oral dosing guinea-pigs. Animal Technology and Welfare 11, 187-188.

Guinea pigs are difficult to oral gavage dose. Previous adverse effects from this dosing method, using rigid catheters, had caused an earlier endpoint to studies and loss of data. We therefore developed a prototype gag...

Huber, H. F., Lewis, K. P. 2011. An assessment of gum-based environmental enrichment for captive gummivorous primates. Zoo Biology 30(1), 71-78.

In the wild, many primates consume gums exuded from trees, and many species are gum specialists. In spite of this, few data exist concerning gum feeding in captivity. Using a web-based survey of 46 zoos...

Moreau, E. 2010. To squeeze or not to squeeze? A Discussion on LAREF, September, 2009. Laboratory Primate Newsletter 49(2), 3-4.

The discussion was started by the following questions: "Is the squeeze-back mechanism more or less stressful than the pole and collar system for removing a macaque from his cage for an IM (intramuscular) injection?" and...

Leonardi, R., Buchanan-Smith, H. M., Dufour, V. et al. 2010. Living together: Behavior and welfare in single and mixed species groups of capuchin (Cebus apella) and squirrel monkeys (Saimiri sciureus). American Journal of Primatology 72(1), 33-47.

There are potential advantages of housing primates in mixed species exhibits for both the visiting public and the primates themselves. If the primates naturally associate in the wild, it may be more educational and enjoyable...

Gattermann, R., Johnston, J., Mcphee, M. E. et al. 2008. Golden hamsters are nocturnal in captivity but diurnal in nature. Biology Letters 4(3), 253-255.

Daily activity rhythms are nearly universal among animals and their specific pattern is an adaptation of each species to its ecological niche. Owing to the extremely consistent nocturnal patterns of activity shown by golden hamsters...

Branson, E. J. (Ed.) 2008. Fish Welfare. Blackwell Publishing Ltd: Oxford, UK, 300 p.

Fish have the same stress response and powers of nociception as mammals. Their behavioural responses to a variety of situations suggest a considerable ability for higher level neural processing – a level of consciousness equivalent...

Barley, J., Mikkelsen, L. F., Francis, R. et al. 2007. Enforced restraint of rodents: A discussion by the Refinement & Enrichment Forum. Animal Technology and Welfare 6(1), 11-13.

The question was asked: "Rodents are often restrained for data collection procedures, such as blood collection and injection, by coaxing them into tubes, for example syringe cylinders or perspex tubes. What can be done to...

Crast, J. 2007. Socially-mediated learning in groups of primates: models and methods. American Journal of Primatology 69(S1), 74. (30th Meeting of the American Society of Primatologists Scientific Program, Abstract #90)

An ethological understanding of a behavioral phenomenon incorporates four levels of explanation: development, mechanism, function, and evolution. The phenomenon of socially-mediated learning has garnered a great deal of attention from ethologists, prominently including primatologists. Gregarious...

Conour, L. A., Murray, K. A., Brown, M. J. 2006. Preparation of animals for research -- Issues to consider for rodents and rabbits. ILAR Journal 47(4), 283-293.

This article provides details to consider when preparing to use animals in biomedical research. The stress of transport and receipt of animals into a new environment mandate the need for a period of stabilization and...

Capitanio, J. P., Kyes, R. C., Fairbanks, L. A. 2006. Considerations in the selection and conditioning of Old World monkeys for laboratory research: Animals from domestic sources. ILAR Journal 47(4), 294-306.

Preparation of domestically bred animals for research usually involves some combination of social separation, relocation, resocialization, alterations in physical space, photoperiod, and diet, as well as exposure to novel environments. The research literature that has...

Huntingford, F. A., Adams, C., Braithwaite, V. A. et al. 2006. Current issues in fish welfare. Journal of Fish Biology 68(2), 332-372.

In common with all vertebrates, fish respond to environmental challenges with a series of adaptive neuro‐endocrine adjustments that are collectively termed the stress response. These in turn induce reversible metabolic and behavioural changes that make...

Hutchinson, E., Avery, A., Van de Woude, S. 2005. Environmental enrichment for laboratory rodents. ILAR Journal 46(2), 148-161.

In this article, laws and guidelines relating to rodent enrichment are reviewed, the natural behaviors of select rodent species are discussed, and an overview of widely used types of enrichment in laboratory rodent management is...

Vermeer, J. 1997. The formation of a captive squirrel monkey group. International Zoo News 44, 146-149.

It is important that all females of a new [heterosexual] group are related to each other, that is, that they come from the same natal group. The introduction of unfamiliar females to a small group...

Reinhardt, V. 1997. Training nonhuman primates to cooperate during handling procedures: A review. Animal Technology 48, 55-73.

Twenty-six reports provide detailed information of how primates can be trained to voluntarily cooperate - rather than resist - during blood collection, injection, topical drug application, blood pressure measurement, urine collection, and capture.

Reinhardt, V. 1994. Traditional handling procedures of laboratory nonhuman primates are an intrinsic source of distress: What can be done? In Touch 1(4), 1 & 6-7.

With some professional expertise and goodwill, there should be no real need to resort to forceful restraint when doing research with nonhuman primates.

Marriott, B. M., Marriott, R. W., Norris, J. et al. 1993. A semi-natural habitat for housing small, nonhuman primates. Journal of Medical Primatology 22, 348-354.

A semi-natural habitat that was designed to house a group of squirrel monkeys is described. Animals maintained in this environment were healthy, and none of the animals exhibited locomotor stereotypies. This facility was easier and...

Murphy, D. E. 1976. Enrichment and occupational devices for orangutans and chimpanzees. International Zoo News 137(23.5), 24-26.

A heavy metal cylinder, 60 cm long and 45 cm in diameter, was capped on each end and bolted to a platform. Three 8 cm holes in the cylinder allowed access to the inside. A...