Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Golledge, H., Richardson, C. (Eds.) 2024. The UFAW Handbook on the Care and Management of Laboratory and Other Research Animals (9th ed.). Wiley-Blackwell. 1040 p.

The latest edition of the seminal reference on the care and management of laboratory and research animals. The newly revised ninth edition of The UFAW Handbook on the Care and Management of Laboratory and Other...

Machado, M., Freitas Silveira, R. M., Machado Bittar, C. M. et al. 2023. Can the emotional state of calves be noticed by their facial expression and heart rate? Applied Animal Behaviour Science 260, 105874.

The aim of this study was to identify whether or not dairy calves change their facial expression and heart rate according to their emotional state when subjected to a stroking or umbrella stimulus. Thirty-two mixed-breed...

Barki, A., Cnaani, A., Biran, J. 2022. How does temperature affect aggression during and after dominance hierarchy formation in Nile tilapia? Applied Animal Behaviour Science 247, 105563.

Social animals commonly establish dominance relationships by means of aggressive interaction, leading to hierarchical stability and priority of access to limited resources by high-ranked individuals. In poikilothermic animals, temperature is a major abiotic factor influencing...

Buckmaster, C. L., Levesque, D., LaFollette, M. et al. 2022. Five hot topics in refinement of nonhuman primate neuroscience research. Laboratory Animal Science Professional 10(1) (January/February), 24-26.

Members of the North American 3Rs Collaborative (NA3RsC) refinement initiative have chosen to summarize developments in five hot topics of interest: 1. Tips for welfare-friendly transport, chairing, and restraint; 2. Guidance on refining food and...

dos Santos Gauy, A. C., Bolognesi, M. C., Gonçalves-de-Freitas, E. 2022. Long-term body tactile stimulation reduces aggression and improves productive performance in Nile tilapia groups. Scientific Reports 12(1), 20239.

One concern of the Anthropocene is the effects of human activities on animal welfare, revealing the urgency to mitigate impacts of rearing environments. Body tactile stimulation (TS), like massage therapy, has emerged as an enrichment...

Camargo-Dos-Santos, B., Bellot, M. S., Guermandi, I. I. et al. 2022. Cannabidiol improves Nile tilapia cichlid fish welfare. Scientific Reports 12(1), 17650.

Cannabidiol (CBD) is a substance derived from Cannabis sativa, widely studied in medicine for controlling neural diseases in humans. Besides the positive effects on humans, it also presents anxiolytic proprieties and decreases aggressiveness and stress...

Mason, G. J., Lavery, J. M. 2022. What is it like to be a bass? Red herrings, fish pain and the study of animal sentience. Frontiers in Veterinary Science 9, 788289.

Debates around fishes’ ability to feel pain concern sentience: do reactions to tissue damage indicate evaluative consciousness (conscious affect), or mere nociception? Thanks to Braithwaite’s research leadership, and concerns that current practices could compromise welfare...

Gilmour, K. M., Bard, B. 2022. Social buffering of the stress response: Insights from fishes. Biology Letters 18(10), 20220332.

Social buffering of stress refers to the effect of a social partner in reducing the cortisol or corticosterone response to a stressor. It has been well studied in mammals, particularly those that form pair bonds...

Dong, B., Liu, J.-X., Quan, R.-C. et al. 2022. Mirror image stimulation could reverse social-isolation-induced aggressiveness in the high-level subsocial lactating spider. Animal Cognition 25(5), 1345–1355.

Conspecific aggressiveness often increases after social isolation for species that are not entirely solitary, and this increased aggression could also be reversed after resocialization. However, literature on this aggression plasticity refers to either permanently social...

Navarro-Castilla, A., Garrido, M., Hawlena, H. et al. 2021. Non-invasive monitoring of adrenocortical activity in three sympatric desert gerbil species. Animals 11(1), 75.

The study of the endocrine status can be useful to understand wildlife responses to the changing environment. Here, we validated an enzyme immunoassay (EIA) to non-invasively monitor adrenocortical activity by measuring fecal corticosterone metabolites (FCM)...

Ramos, J., Balasch, J. C., Tort, L. 2021. About welfare and stress in the early stages of fish. Frontiers in Veterinary Science 8, 634434.

In conclusion, the investigations carried out up to now demonstrate that during the early stages fish show high sensitivity to many types of stressors involving an array of responses to overcome alterations that could affect...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

da Silva Medeiros Elidio, H., Coelho, J. W. R., Cavalcanti Pereira da Silva, L. C. et al. 2021. Housing density and aggression in Syrian hamsters. JAALAS 60(5), 506-509.

The Syrian hamster (Mesocricetus auratus) is a solitary and naturally territorial animal, with female hamsters being more aggressive than males. This behavior makes handling difficult because they are usually housed in groups, which can lead...

Byrnes, E. E., Lear, K. O., Morgan, D. L. et al. 2020. Respirometer in a box: Development and use of a portable field respirometer for estimating oxygen consumption of large‐bodied fishes. Journal of Fish Biology 96(4), 1045-1050.

Respirometry has become the standard method for measuring the metabolic rate of fishes. Traditionally, respirometry has required the fish to be kept in captivity and tested under controlled conditions; however, many species do not readily...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

Borland, J. M., Kim, E., Swanson, S. P. et al. 2020. Effect of aggressive experience in female Syrian hamsters on glutamate receptor expression in the nucleus accumbens. Frontiers in Behavioral Neuroscience 14, 583395.

Our social relationships determine our health and well-being. In rodent models, there is now strong support for the rewarding properties of aggressive or assertive behaviors to be critical for the expression and development of adaptive...

Bertelsen, M., Jensen, M. B. 2019. Does dairy calves’ motivation for social play behaviour build up over time? Applied Animal Behaviour Science 214, 18-24.

Dairy calves are often housed in individual pens, which limits play behaviour. This study investigates whether the motivation for social play builds up during periods of deprivation hereof. Sixteen mixed-sex pairs of calves (33 ±...

Arechavala-Lopez, P., Saraiva, J. L. 2019. Welfare of Cultured and Experimental Fishes. Basel, Switzerland: MDPI, 132 pages.

This open access book is a printed edition of the Special Issue on Welfare of Cultured and Experimental Fishes that was published in the journal Fishes. The PDF is free for download.

Gonçalves-de-Freitas, E., Bolognesi, M. C., dos Santos Gauy, A. C. et al. 2019. Social behavior and welfare in Nile tilapia. Fishes 4(2), 23.

Fish social behavior can be affected by artificial environments, particularly by factors that act upon species that show aggressive behavior to set social rank hierarchy. Although aggressive interactions are part of the natural behavior in...

Barreiro-Vázquez, J. D., Miranda, M., Barreiro-Vilanova, M. I. et al. 2019. Characterization of the normal portal and hepatic blood flow of adult Holstein-Friesian cows. Animals 9(6), 386.

Knowledge of physiological portal and hepatic blood flow in cattle is essential for the use of Doppler ultrasound for diagnostic purposes. In this paper, we describe a protocol for the systematic ultrasonography evaluation of the...

Lowe, G., Sutherland, M., Waas, J. et al. 2019. Infrared thermography—A non-invasive method of measuring respiration rate in calves. Animals 9(8), 535.

Respiration rate (RR) is commonly used to assess states of cattle health and welfare such as pain, stress and disease. Traditionally, RR is measured by counting flank movements, a method often considered to be labour-intensive...

McKenzie, D. J., Sadoul, B., Geffroy, B. 2019. Measuring cortisol, the major stress hormone in fishes. Journal of Fish Biology 94(4), 540-555.

Stress in teleosts is an increasingly studied topic because of its interaction with growth, reproduction, immune system and ultimately fitness of the animal. Whether it is for evaluating welfare in aquaculture, adaptive capacities in fish...

Hurtado-Parrado, C., Cardona-Zea, Á, Arias-Higuera, M. et al. 2019. Behavioral patterns of laboratory Mongolian gerbils by sex and housing condition: A case study with an emphasis on sleeping patterns. Journal of Veterinary Behavior 30, 69-79.

The behavioral patterns of Mongolian gerbils (Meriones unguiculatus) housed individually and in same-sex groups (siblings) were characterized. Gerbils were continuously video-recorded 24 hours (day 1) and 120 hours (day 5) after housing conditions were established...

Coke, C., Skoumbourdis, E., Rodgers, J. C. et al. 2018. Blunting/cutting canines of adult male monkeys: A discussion by the Laboratory Animal Refinement & Enrichment Forum. Animal Technology & Welfare 17(2), 105-107.

"When you keep adult Rhesus macaque (Macaca mulatta) males, adult Cynomolgus (Macaca fascicularis) males or adult Vervet males (Chlorocebus pygerythrus), in the same enclosure, is it advisable to have the canines of the males blunted...

Baker, S., Knight, E., Pellett, S. et al. 2018. Spider and chips: The use of internal Radio Frequency Identification (RFID) chips as a minimally invasive method to measure internal body temperatures in invertebrates. Animal Technology and Welfare 17(1), 1-7.

Internal RFID transponders have been used in vertebrates for many years, however studies into their use in invertebrates are less well represented in the literature. The use of RFID transponders for internal temperature measurement represents...