Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Cox, R. J., Nol, P., Ellis, C. K. et al. 2019. Research with agricultural animals and wildlife. ILAR Journal 60(1), 66-73.

In fiscal year 2016, agricultural animals such as swine, sheep, goats, and cattle represented 10% of the 820 812 animals used in USDA-regulated research. In addition to traditional agricultural animals, research studies using captive wildlife...

Narayan, E., Perakis, A., Meikle, W. 2019. Using thermal imaging to monitor body temperature of koalas (Phascolarctos cinereus) in a zoo setting. Animals 9(12), 1094.

Non-invasive techniques can be applied for monitoring the physiology and behaviour of wildlife in Zoos to improve management and welfare. Thermal imaging technology has been used as a non-invasive technique to measure the body temperature...

Fischer, C. P., Romero, L. M. 2019. Chronic captivity stress in wild animals is highly species-specific. Conservation Physiology 7(1), coz093.

Wild animals are brought into captivity for many reasons—conservation, research, agriculture and the exotic pet trade. While the physical needs of animals are met in captivity, the conditions of confinement and exposure to humans can...

Koistinen, T., Raatikainen, S., Sepponen, J. et al. 2018. Resting preferences and welfare of Finnraccoon (Nyctereutes procyonoides ussuriensis) females housed in various housing conditions in winter. Applied Animal Behaviour Science 207, 129-137.

Raccoon dog (Nyctereutes procyonoides ussuriensis) is the only canid species using facultative passive wintering strategy. The aim of the present study is to document the behaviour and welfare of the farmed variant of the species...

Tennant, K. S., Segura, V. D., Morris, M. C. et al. 2018. Achieving optimal welfare for the Nile hippopotamus (Hippopotamus amphibius) in North American zoos and aquariums. Behavioural Processes 156, 51-57.

Compared to other megafauna managed in zoos and aquariums, the current state of welfare for the Nile hippopotamus (Hippopotamus amphibius) is poorly understood. Complex behavior and physiological characteristics make hippos a difficult species to manage...

Freling, S. 2018. Learning about tree shrews. Laboratory Animal Science Professional 5(4) (December), 14-17.

This article describes the natural behaviors of tree shrews and how to accommodate for their care and welfare in a laboratory, including information on infant rearing and diet, caging, environmental enrichment, and mitigation of stressors.

Unakafov, A. M., Möller, S., Kagan, I. et al. 2018. Using imaging photoplethysmography for heart rate estimation in non-human primates. PLOS ONE 13(8), e0202581.

For humans and for non-human primates heart rate is a reliable indicator of an individual’s current physiological state, with applications ranging from health checks to experimental studies of cognitive and emotional state. In humans, changes...

Stella, J. L., Croney, C. C., Buffington, C. T. 2017. Behavior and welfare of domestic cats housed in cages larger than U.S. norm. Journal of Applied Animal Welfare Science 20(3), 296-312.

The effect of providing additional floor space on cat behavior and welfare is not well documented. This study involved replication of an investigation of cats’ responses to enhanced cage and room environments using cages of...

McGowan, R. T. S., Ellis, J. J., Bensky, M. K. et al. 2017. The ins and outs of the litter box: A detailed ethogram of cat elimination behavior in two contrasting environments. Applied Animal Behaviour Science 194, 67-78.

Few studies have sought to describe cat elimination behavior in detail and much of the information presently available focuses on factors that potentially cause cats to reject a litter box. Thus, the ethograms published in...

Bryan, K., Bremner-Harrison, S., Price, E. et al. 2017. The impact of exhibit type on behaviour of caged and free-ranging tamarins. Applied Animal Behaviour Science 193, 77-86.

The lack of appropriate stimuli associated with captive environments has been documented to cause several behavioural and physiological issues in captive species, including loss of natural behaviours, psychopathologies and decreased reproductive success. Providing free-ranging, naturalistic...

Li, S.-R., Hao, X., Bi, J.-H. et al. 2017. Why do female desert lizards construct burrows to lay eggs? Behaviour 154(9/10), 1051–1068.

Many oviparous animals construct well-designed nests to provide relatively favourable conditions for their eggs and hatchlings, but the direct evidence that nest structure can determine their reproductive success is insufficient. In the present study, we...

Ferrecchia, C., Pincolini, K., Chum, H. et al. 2017. Husbandry of laboratory-housed Egyptian (Rousettus aegyptiacus) fruit bats. Laboratory Animal Science Professional 5(2) (June), 18-23.

The University of California, Berkeley, houses a variety of unique species, each requiring their own specific husbandry protocols, as well as additional enrichment and safety protocols. While housing of bats in zoological parks is common...

Skrinyer, A. J., Faure, P. A., Dannemiller, S. et al. 2017. Care and husbandry of the world’s only flying mammals. Laboratory Animal Science Professional 5(2) (June), 24-27.

Husbandry of these unusual and complicated creatures requires creativity and attention to species-specific needs. Authors from the Northeast Ohio Medical University (NEOMED), SUNY Downstate, and McMaster University formed a collaboration aimed at optimizing the health...

Tucker, R. D. 2017. Woodchuck College. Laboratory Animal Science Professional 5(2) (June), 33-36.

Marmota monax is a valuable laboratory animal species used in studies of Hepatitis B virus (HBV), food intake, obesity, hibernation, and circannual cycles. This article describes the woodchuck’s (also known as groundhog) natural behavior and...

Razal, C., Bryant, J., Miller, L. 2017. Monitoring the behavioral and adrenal activity of giraffe (Giraffa camelopardalis) to assess welfare during seasonal housing changes. Animal Behavior and Cognition 4(2), 154–164.

In inclement weather, northern zoos are required to provide animals from warmer climates with indoor exhibits. These indoor exhibits are typically smaller, lack natural substrate, and have lower levels of stimulation for the animals. The...

Martín, O., Vinyoles, D., García-Galea, E. et al. 2016. Improving the welfare of a zoo-housed male drill (Mandrillus leucophaeus poensis) aggressive toward visitors. Journal of Applied Animal Welfare Science 19(4), 323-334.

Improving the welfare of nonhuman animals in captivity and maintaining behavioral competence for future conservation purposes is of the highest priority for zoos. The behavior of an aggressive male drill (Mandrillus leucophaeus poensis) was assessed...

Hooper, J. 2016. An assessment of enrichment strategies for sanctuary housed spider monkeys (Ateles geoffroyi). Canopy 17(1), 14-16.

From May- July 2014, I conducted research within a private spider monkey sanctuary, Ecoparque el Fenix, in Campeche, Mexico, home to 20 spider monkeys obtained from the illegal pet trade. Limited financial resources had resulted...

O'Keefe, S. 2016. Non-human primate housing facility at Newcastle University. Animal Technology and Welfare 15(2), 131-132.

Monkeys first arrived in the Comparative Biology Centre (CBC) at Newcastle University in 2000. They were housed in three small separate units consisting of steel and wooden cages. In 2011 a decision was made to...

Loberg, J. M., Lundmark, F. 2016. The effect of space on behaviour in large groups of domestic cats kept indoors. Applied Animal Behaviour Science 182, 23-29.

The domestic cat (Felis silvestris catus) originates from the solitary living African wildcat (Felis silvestris lybica). However, through domestication, the domestic cat has become more social towards conspecifics and group housing of cats is common...

Crast, J., Bloomsmith, M. A., Jonesteller, T. 2015. Effects of changing housing conditions on mangabey behavior (Cercocebus atys): Spatial density, housing quality, and novelty effects. American Journal of Primatology 77(9), 1001-1014.

The separate influences of spatial density and housing quality on the behavior of captive animals are difficult to measure because the two factors are often intrinsically linked. Here, we recorded affiliative and agonistic behavior in...

Pearson, B. L., Reeder, D. M., Judge, P. G. 2015. Crowding increases salivary cortisol but not self-directed behavior in captive baboons. American Journal of Primatology 77, 462-67.

Reduced space can lead to crowding in social animals. Crowding increases the risk of agonistic interactions that, in turn, may require additional physiological defensive coping mechanisms affecting health. To determine the stress induced from increased...

Bayne, K. A., Beaver, B. V., Mench, J. A. et al. 2015. Laboratory animal behavior. In: Laboratory Animal Medicine, 3rd edition. Fox, J. G., Anderson, L., Otto, G., et al. (eds). Elsevier, Inc., Amsterdam, NL. pp. 1617-1651.

The study of laboratory animal behavior has increased steadily over the last decade, with expanding emphasis on a variety of commonly used species. In the United States, this trend was initially focused on species for...

Arhant, C., Wogritsch, R., Troxler, J. 2015. Assessment of behavior and physical condition of shelter cats as animal-based indicators of welfare. Journal of Veterinary Behavior 10(5), 399-406.

Surveillance of cat shelters by official veterinarians in Austria is based on legal requirements and does not directly assess cat welfare. The aim of this study was to develop animal-based parameters that are feasible to...

Stella, J., Croney, C., Buffington, T. 2014. Environmental factors that affect the behavior and welfare of domestic cats (Felis silvestris catus) housed in cages. Applied Animal Behaviour Science 160, 94-105.

Understanding environmental factors that affect the behavior of cats in cages is important if caretakers are to improve the welfare of confined cats. The aim of this study was to examine the effects of the...

Reinhardt, V. (ed.) 2013. Compassion Makes a Difference - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume III. Animal Welfare Institute, Washington, DC.

This is the third volume of discussions that took place on the Laboratory Animal Refinement & Enrichment Forum (LAREF). This forum is dedicated to the exchange of personal experiences of refining the conditions under which...