Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Holdgate, M. R., Meehan, C. L., Hogan, J. N. et al. 2016. Walking behavior of zoo elephants: Associations between GPS-measured daily walking distances and environmental factors, social factors, and welfare indicators. PLOS ONE 11(7), e0150331.

Research with humans and other animals suggests that walking benefits physical health. Perhaps because these links have been demonstrated in other species, it has been suggested that walking is important to elephant welfare, and that...

Yamanashi, Y., Teramoto, M., Morimura, N. et al. 2016. Effects of relocation and individual and environmental factors on the long-term stress levels in captive chimpanzees (Pan troglodytes): Monitoring hair cortisol and behaviors. PLOS ONE 11(7), e0160029.

Understanding the factors associated with the long-term stress levels of captive animals is important from the view of animal welfare. In this study, we investigated the effects of relocation in addition to individual and environmental...

Holdgate, M. R., Meehan, C. L., Hogan, J. N. et al. 2016. Recumbence behavior in zoo elephants: Determination of patterns and frequency of recumbent rest and associated environmental and social factors. PLOS ONE 11(7), e0153301.

Resting behaviors are an essential component of animal welfare but have received little attention in zoological research. African savanna elephant (Loxodonta africana) and Asian elephant (Elephas maximus) rest includes recumbent postures, but no large-scale investigation...

Miller, M. A., Hogan, J. N., Meehan, C. L. 2016. Housing and demographic risk factors impacting foot and musculoskeletal health in African elephants [Loxodonta africana] and Asian elephants [Elephas maximus] in North American zoos. PLOS ONE 11(7), e0155223.

For more than three decades, foot and musculoskeletal conditions have been documented among both Asian [Elephas maximus] and African [Loxodonta africana] elephants in zoos. Although environmental factors have been hypothesized to play a contributing role...

Prado-Oviedo, N. A., Bonaparte-Saller, M. K., Malloy, E. J. et al. 2016. Evaluation of demographics and social life events of Asian (Elephas maximus) and African elephants (Loxodonta africana) in North American zoos. PLOS ONE 11(7), e0154750.

This study quantified social life events hypothesized to affect the welfare of zoo African and Asian elephants, focusing on animals that were part of a large multi-disciplinary, multi-institutional elephant welfare study in North America. Age...

Morfeld, K. A., Meehan, C. L., Hogan, J. N. et al. 2016. Assessment of body condition in African (Loxodonta africana) and Asian (Elephas maximus) elephants in North American zoos and management practices associated with high body condition scores. PLOS ONE 11(7), e0155146.

Obesity has a negative effect on health and welfare of many species, and has been speculated to be a problem for zoo elephants. To address this concern, we assessed the body condition of 240 elephants...

Wallace, P. Y., Asa, C. S., Agnew, M. et al. 2016. A review of population control methods in captive-housed primates. Animal Welfare 25(1), 7-20.

The success of breeding primates in captivity has led to a surplus number of animals in collections. This review examines published journals and key books to investigate the various methods of primate population control. Hormonal...

Bradbury, A. G., Clutton, R. E. 2016. Review of practices reported for preoperative food and water restriction of laboratory pigs (Sus scrofa). JAALAS 55(1), 35–40.

The traditionally cited recommendations for the preoperative restriction of food (including bedding) and water in pigs do not appear to be evidence-based. As a preliminary step in elucidating a rationale for and standardizing preoperative food...

Sullivan, K., Kerr, K., Wanty, R. et al. 2016. Dietary management, husbandry, and body weights of African elephants (Loxodonta africana) during successful pregnancies at Disney's Animal Kingdom. Zoo Biology 35(6), 574-578.

Successful pregnancy in African elephants is influenced by biological and environmental factors. For managed elephants many of these factors are set directly or indirectly by their human care takers, including nutrition and husbandry. While African...

Wang, L. H., Li, Y. Z. 2016. Effect of continuous access to feeding stalls during mixing on behavior, welfare, and performance of group-housed gestating sows in different social ranks. Canadian Journal of Animal Science 96(3), 386-396.

This study was conducted to evaluate a strategy of using feeding stalls to protect low-ranking sows in group-housing systems. Sows (n = 150, parity 1–9) were mixed at weaning in pens of 15 sows. Control...

Campbell, D. L. M., Lester-Saenz, A. H., Link, J. E. et al. 2016. Comparison of wood shavings and chopped straw as bedding material for fur-farmed American mink (Neovison vison). Canadian Journal of Animal Science 97(1), 10-13.

Wood shavings or chopped straw in American mink dams’ nests did not affect kit survivability (P ≥ 0.51). Straw-housed male kits were lighter at 6 wk (P = 0.01). Shavings nests were better constructed (all...

Hopper, L. D. 2016. Automated microsampling technologies and enhancements in the 3Rs. ILAR Journal 57(2), 166-177.

Data collected in vivo is essential for advising decisions on drug screening and development and basic research, and animal models are used extensively for acquiring experimental measurements. Traditionally, collection of specimens has been invasive, stressful...

Fuller, G., Raghanti, M. A., Dennis, P. M. et al. 2016. A comparison of nocturnal primate behavior in exhibits illuminated with red and blue light. Applied Animal Behaviour Science 184, 126-134.

Over evolutionary time, light from the sun, moon, and stars has provided organisms with reliable information about the passage of time; but modern artificial lighting has drastically altered these cues. Evidence is accumulating that exposure...

Wallgren, T., Westing, R., Gunnarsson, S. 2016. A survey of straw use and tail biting in Swedish pig farms rearing undocked pigs. Acta Veterinaria Scandinavica 58(1), 84.

Tail biting is a common problem in intensive pig farming, affecting both welfare and production. Although routine tail docking is banned within the EU, it remains a common practice to prevent tail biting. Straw as...

Larsson, J., Fall, N., Lindberg, M. 2016. Farm characteristics and management routines related to neonatal porcine diarrhoea: a survey among Swedish piglet producers. Acta Veterinaria Scandinavica 58(1), 77.

In recent years reports from a number of countries, including Sweden, describe problems with diarrhoea in newborn piglets despite the use of previously effective preventive measures. This seemingly altered disease pattern of neonatal porcine diarrhoea...

Baines, F. M., Chattell, J., Dale, J. et al. 2016. How much UVB does my reptile need? The UV-Tool, a guide to the selection of UV lighting for reptiles and amphibians in captivity. Journal of Zoo and Aquarium Research 4(1), 42-63.

Guidance is almost non-existent as to suitable levels of UV lighting for reptiles and amphibians, or how to achieve satisfactory UV gradients using artificial lighting. The UV-Tool is a working document that seeks to address...

Prior, H., Bottomly, A., Champéroux, P. et al. 2016. Social housing of non-rodents during cardiovascular recordings in safety pharmacology and toxicology studies. Journal of Pharmacological and Toxicological Methods 81, 75-87.

Introduction: The Safety Pharmacology Society (SPS) and National Centre for the Replacement, Refinement & Reduction of Animals in Research (NC3Rs) conducted a survey and workshop in 2015 to define current industry practices relating to housing...

Tonkins, B. M., Tyers, A. M., Cook G. M. 2015. Cuttlefish in captivity: An investigation into housing and husbandry for improving welfare. Applied Animal Behaviour Science 168, 77-83.

The European cuttlefish (Sepia officinalis) is often kept in public aquaria, is becoming more common in aquaculture, and is also the most frequently used cephalopod in European research. Since 1st January 2013, all cephalopods (Mollusca)...

Caron, A., Lelong, C., Pascual, M. H. et al. 2015. Miniaturized blood sampling techniques to benefit reduction in mice and refinement in nonhuman primates: Application to bioanalysis in toxicity studies with antibody-drug conjugates. JAALAS 54(2), 145-152.

Minimizing the number of animals in regulatory toxicity studies while achieving study objectives to support the development of future medicines contributes to good scientific and ethical practices. Recent advances in technology have enabled the development...

Pritchett-Corning, K. R., Gaskill, B. N. 2015. Lack of negative effects on Syrian hamsters and Mongolian gerbils housed in the same secondary enclosure. JAALAS 54(3), 261-266.

In cases where different species might be housed in the same room or secondary enclosure, the Guide for the Care and Use of Laboratory Animals recommends that the animals should be behaviorally compatible and have...

Holinger, M., Fruh, B., Hillmann, E. 2015. Group composition for fattening entire male pigs under enriched housing conditions - Influences on behaviour, injuries and boar taint compounds. Applied Animal Behaviour Science 165, 47-56.

In organic farming, the production of pork from entire male pigs seems to be the most promising alternative to castration, as organic animal husbandry aims at high standards of animal welfare and elimination of mutilations...

Bloomsmith, M., Kim, N., Franklin, A. et al. 2015. Positive reinforcement methods to train chimpanzees to cooperate with urine collection. JAALAS 54, 66-69.

Positive reinforcement training can be used in many ways to enhance the welfare of captive primates. Training for biologic sample collection is one application of positive reinforcement training. In this study, 35 adult female chimpanzees...

Thomsson, O., Bergqvist, A. S., Sjunnesson, Y. et al. 2015. Aggression and cortisol levels in three different group housing routines for lactating sows. Acta Veterinaria Scandinavica 57(1), 9.

Background: Lactating sows in Swedish organic piglet production are commonly group-housed with piglets in a multi-suckling pen within 14 days after farrowing. Nursing behaviour may be disturbed when lactating sows are moved to a new...

Verdon, M., Hansen, C. F., Rault, J. L. et al. 2015. Effects of group housing on sow welfare: a review. Journal of Animal Science 93(5), 1999-2017.

Factors that have been shown to impact the welfare of group-housed sows are discussed in this review. Floor space allowance markedly affects sow welfare. In addition to quantity of floor space, the quality of space...

Nääs, I. A., Garcia, R. G., Caldara, F. R. 2015. Infrared thermal image for assessing animal health and welfare. Journal of Animal Behaviour and Biometeorology 2(3), 66-72.

Infrared thermal imaging is a non-destructive testing technology that can be used to determine the superficial temperature of objects. This technology has an increasing use in detecting diseases and distress in animal husbandry within the...