Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Thøfner, I., Hougen, H. P., Villa, C. et al. 2020. Pathological characterization of keel bone fractures in laying hens does not support external trauma as the underlying cause. PLOS ONE 15(3), e0229735.

Keel bone fractures in laying hens have been described with increasing prevalence from several countries over the last twenty years and are considered one of the greatest welfare problems to the layer industry. In Denmark...

Armstrong, E. A., Rufener, C., Toscano, M. J. et al. 2020. Keel bone fractures induce a depressive-like state in laying hens. Scientific Reports 10(1), 3007.

In commercial flocks of laying hens, keel bone fractures (KBFs) are prevalent and associated with behavioural indicators of pain. However, whether their impact is severe enough to induce a depressive-like state of chronic stress is...

Harvey, A., Beausoleil, N., Ramp, D. et al. 2020. A ten-stage protocol for assessing the welfare of individual non-captive wild animals: Free-roaming horses (Equus ferus caballus) as an example. Animals 10(1), 148.

Knowledge of the welfare status of wild animals is vital for informing debates about the ways in which we interact with wild animals and their habitats. Currently, there is no published information about how to...

Pfeifer, M., Schmitt, A., Hessel, E. 2020. Animal welfare assessment of fattening pigs: A case study on sample validity. Animals 10(3), 389.

A guide for animal welfare assessment of fattening pigs recommends recording some of the indicators for a sample of the animals from a herd. However, it is not certain whether the herd’s level of welfare...

Vullo, C., Barbieri, S., Catone, G. et al. 2020. Is the Piglet Grimace Scale (PGS) a useful welfare indicator to assess pain after cryptorchidectomy in growing pigs? Animals 10(3), 412.

Pig cryptorchidism is a congenital anomaly, which requires surgical intervention. Pain assessment in pig farming has some limitations and consumers are increasingly concerned about suffering linked to on-farm procedures. The PGS seems to be a...

Jorquera-Chavez, M., Fuentes, S., Dunshea, F. et al. 2020. Remotely sensed imagery for early detection of respiratory disease in pigs: A pilot study. Animals 10(3), 451.

Respiratory diseases are a major problem in the pig industry worldwide. Due to the impact of these diseases, the early identification of infected herds is essential. Computer vision technology, using RGB (red, green and blue)...

Friedrich, L., Krieter, J., Kemper, N. et al. 2020. Frothy saliva—A novel indicator to assess stereotypies in sows? Applied Animal Behaviour Science 222, 104897.

The present study aimed at introducing a reliable and more feasible indicator to evaluate stereotypies in sows in comparison with the ‘Welfare Quality® animal welfare assessment protocol for sows and piglets’. Therefore, the indicators for...

Chou, J.-Y., D’Eath, R. B., Sandercock, D. A. et al. 2020. Enrichment use in finishing pigs and its relationship with damaging behaviours: Comparing three wood species and a rubber floor toy. Applied Animal Behaviour Science 224, 104944.

Environmental enrichment in pig housing is a legal requirement under current EU legislation, but some recommended loose materials may cause obstructions in fully-slatted systems. Wood is an organic material that could be compatible with slatted...

Filliettaz, C., Maxwell, L., Dragon, M. et al. 2020. Novel bleeding techniques in hamsters. Laboratory Animal Science Professional 8(1) (January/February), 44-46.

Hamsters have historically been used in our pharmacokinetic (PK) studies using the retro-orbital (RO) bleeding technique to collect blood samples. If performed incorrectly, this technique has the potential for animal welfare complications not usually seen...

Zemanova, M. A. 2020. Towards more compassionate wildlife research through the 3Rs principles: Moving from invasive to noninvasive methods. Wildlife Biology 2020(1), no page numbers.

Research in ecology and wildlife biology remains crucial for increasing our knowledge and improving species management and conservation in the midst of the current biodiversity crisis. However, obtaining information on population status often involves invasive...

Byrd, C. J., Radcliffe, J. S., Craig, B. A. et al. 2020. Measuring piglet castration pain using linear and non-linear measures of heart rate variability. Animal Welfare 29(3), 257-269.

The purpose of this study was to evaluate whether linear and non-linear measures of heart rate variability (HRV) could be used as indicators of piglet castration pain. Thirty piglets were allocated to 1 of 4...

Park, R. M., Cramer, M. C., Wagner, B. K. et al. 2020. A comparison of behavioural methodologies utilised to quantify deviations in piglet behaviour associated with castration. Animal Welfare 29(3), 285-292.

Surgical castration is a painful procedure that is routinely performed without pain relief on commercial pig (Sus scrofa domesticus) farms. Previous research has focused on quantifying piglet pain response through behaviours. However, to date, behavioural...

Friedrich, L., Krieter, J., Kemper, N. et al. 2020. Interobserver reliability of measures of the Welfare Quality® animal welfare assessment protocol for sows and piglets. Animal Welfare 29(3), 323-337.

The aim of this study was to assess the interobserver reliability of the measures forming the Welfare Quality® animal welfare assessment protocol for sows and piglets. The study was carried out at nine farms in...

Von Jasmund, N., Wellnitz, A., Krommweh, M. S. et al. 2020. Using passive infrared detectors to record group activity and activity in certain focus areas in fattening pigs. Animals 10(5), 792.

Animal behavior is an important aspect in the assessment of animal welfare. Passive infrared detectors (PID), detecting thermal changes to measure activity, have already been used to record data on the behavior of groups of...

Çavuşoğlu, E., Rault, J.-L., Gates, R. et al. 2020. Behavioral response of weaned pigs during gas euthanasia with CO2, CO2 with butorphanol, or nitrous oxide. Animals 10(5), 787.

The swine industry is often forced to euthanize pigs in the first few weeks of life due to injuries, hernias, or unthriftiness. The majority of pigs are euthanized using carbon dioxide (CO2) gas asphyxiation but...

Turner, P. V., Pang, D. S., Lofgren, J. L. 2019. A review of pain assessment methods in laboratory rodents. Comparative Medicine 69(6), 451–467.

Ensuring that laboratory rodent pain is well managed underpins the ethical acceptability of working with these animals in research. Appropriate treatment of pain in laboratory rodents requires accurate assessments of the presence or absence of...

Bøgh, N., Agger, P., Omann, C. et al. 2020. New device for noninvasive telemetric monitoring of vital signs in healthy and newly operated piglets. JAALAS 59(1), 90–93.

Measuring vital signs is central to medical practice, but they are difficult to monitor in awake laboratory animals. We examined the feasibility of a noninvasive device [Cortrium C3 device] for telemetric assessment of respiration rate...

Hagemeister, K., Ernst, L., Kadaba Srinivasan, P. et al. 2020. Severity assessment in pigs after partial liver resection: Evaluation of a score sheet. Laboratory Animals 54(3), 251–260.

Severity assessment in biomedical research is required by the European authorities. Therefore, a variety of score sheets are available. The first score sheets were designed and introduced by Morton and Griffith (M&G) in 1985, to...

Yamahachi, H., Zai, A. T., Tachibana, R. O. et al. 2020. Undirected singing rate as a non-invasive tool for welfare monitoring in isolated male zebra finches. PLOS ONE 15(8), e0236333.

Research on the songbird zebra finch (Taeniopygia guttata) has advanced our behavioral, hormonal, neuronal, and genetic understanding of vocal learning. However, little is known about the impact of typical experimental manipulations on the welfare of...

Wolf, T. E., Mangwiro, N., Fasina, F. O. et al. 2020. Non-invasive monitoring of adrenocortical function in female domestic pigs using saliva and faeces as sample matrices. PLOS ONE 15(6): e0234971.

Intensive pig management involves in a commercial setting the housing and implementation of certain procedures, such as castration and tail docking, which may be stressful for the animal. Good farming practices include the reduction of...

Alameer, A., Kyriazakis, I., Bacardit, J. 2020. Automated recognition of postures and drinking behaviour for the detection of compromised health in pigs. Scientific Reports 10, 13665.

Changes in pig behaviours are a useful aid in detecting early signs of compromised health and welfare. In commercial settings, automatic detection of pig behaviours through visual imaging remains a challenge due to farm demanding...

Statham, P., Hannuna, S., Jones, S. et al. 2020. Quantifying defence cascade responses as indicators of pig affect and welfare using computer vision methods. Scientific Reports 10, 8933.

Affective states are key determinants of animal welfare. Assessing such states under field conditions is thus an important goal in animal welfare science. The rapid Defence Cascade (DC) response (startle, freeze) to sudden unexpected stimuli...

Parois, S. P., Duttlinger, A. W., Richert, B. T. et al. 2020. Effects of three distinct 2-week long diet strategies after transport on weaned pigs' short and long-term welfare markers, behaviors, and microbiota. Frontiers in Veterinary Science 7, 140.

Alternative feed supplements have shown promising effects in terms of performance, but their effects on welfare have had little evaluation. In the present study, we aimed at evaluating the effect of diet supplementation on welfare...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

Stracke, J., Klotz, D., Wohlsein, P. et al. 2020. Scratch the surface: Histopathology of foot-pad dermatitis in turkeys (Meleagris gallopavo). Animal Welfare 29(4), 419-432.

Foot-pad dermatitis (FPD) is an important indicator of animal welfare in turkeys (Meleagris gallopavo). The present study aimed to evaluate the reliability and validity of a commonly used five-point visual score (VC), assessing FPD based...