Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Weaver, H. L., Carbaugh, C. M., Madejczyk, M. S. et al. 2024. Comparison of tricaine methanesulfonate (MS-222) and alfaxalone anesthesia in zebrafish (Danio rerio). JAALAS 63(1), 74–80.

The research use of zebrafish has risen exponentially over the past decade while anesthetic options have remained largely unchanged.6 ricaine methanesulfonate (MS-222) is widely accepted as an anesthetic for routine husbandry procedures, however it has...

Miller, R., Grott, A., Patzkéwitsch, D. et al. 2023. Behavior of piglets in an observation arena before and after castration with local anesthesia. Animals 13(3), 529.

Surgical castration of piglets is generally recognized as a painful procedure, but there is currently no gold standard for the assessment of pain behavior in piglets. However, pain assessment is essential for evaluating the effectiveness...

Mirra, A., Maidanskaia, E. G., Carmo, L. P. et al. 2023. How is depth of anaesthesia assessed in experimental pigs? A scoping review. PLOS ONE 18(3), e0283511.

Despite the large number of pigs involved in translational studies, no gold standard depth of anaesthesia indicators are available. We undertook a scoping review to investigate and summarize the evidence that sustains or contradicts the...

Robles, I., Luna, S. P. L., Trindade, P. H. E. et al. 2023. Validation of the Unesp-Botucatu pig composite acute pain scale (UPAPS) in piglets undergoing castration. PLOS ONE 18(4), e0284218.

To accurately assess pain and support broadly-based analgesic protocols to mitigate swine pain, it is imperative to develop and validate a species-specific pain scale. The objective of this study was to investigate the clinical validity...

Warwick, C., Pilny, A., Steedman, C. et al. 2023. Mobile zoos and other itinerant animal handling events: Current status and recommendations for future policies. Animals 13(2), 214.

Mobile zoos are events in which non-domesticated (exotic) and domesticated species are transported to venues such as schools, hospitals, parties, and community centres, for the purposes of education, entertainment, or social and therapeutic assistance. We...

Costea, R., Ene, I., Pavel, R. 2023. Pig sedation and anesthesia for medical research. Animals 13(24), 3807.

In clinical veterinary practice, proper training and expertise in anesthesia administration and monitoring are essential. Pigs are suitable experimental animals for many surgical techniques because they are similar in size to humans and have a...

D’Alessio, R. M., McAloon, C. G., Boyle, L. A. et al. 2023. Comparison between two scoring methods to assess tail damage of docked pig carcasses during postmortem inspection in Ireland. Veterinary Record Open 10(2), e66.

Background Tail inspection in the abattoir is a tool to help determine the welfare status of pigs. However, methodologies vary widely. Moreover, meat inspection is moving from palpation and incision towards visual-only (VIS) examination. This...

Mirra, A., Hight, D., Kovacevic, A. et al. 2023. Sedline® miscalculation of depth of anaesthesia variables in two pigs due to electrocardiographic signal contamination. Animals 13(17), 2699.

Two young (11-week-old) pigs underwent sole propofol anaesthesia as part of an experimental study. The depth of anaesthesia was evaluated both clinically and using the electroencephalography(EEG)-based monitor Sedline; in particular, the patient state index, suppression...

Wang, C., Yang, C., Zeng, Y. et al. 2023. GnRH-immunocastration: An alternative method for male animal surgical castration. Frontiers in Veterinary Science 10.
Lanthony, M., Briard, E., Špinka, M. et al. 2023. Weaned piglet’s reactivity to humans, tonic immobility and behaviour in a spatial maze test is affected by gestating sows’ relationship to humans and positive handling at weaning. Applied Animal Behaviour Science 268, 106080.

Fear of human can impact negatively offspring’s behaviour and cognition whereas early positive handling has positive impacts. The aim of this study was to evaluate the crossed effects of trans-generational transfer and familiarisation with human...

Miller, S. L., Leri, F., Pushinsky, A. et al. 2023. Zebrafish (Danio rerio) distinguish between two human caretakers and their associated roles within a captive environment. Applied Animal Behaviour Science 267, 106053.

Zebrafish have become a popular biomedical model in recent decades, and are now maintained in laboratories worldwide. However, living within a captive environment can introduce novel environmental stressors and experiencing stress chronically can negatively affect...

Pierdon, M. K., Berdahl, S. E. 2023. Effect of topical spray containing lidocaine on piglet behaviour post castration. Journal of Applied Animal Welfare Science 26(2), 195–204.

Previous studies examining the impact of topical lidocaine spray on postcastration pain behavior in piglets used scan sampling for the collection of behavior data. This methodology led to inconclusive results on the efficacy of topical...

Acharya, R. Y., Hemsworth, P. H., Coleman, G. J. et al. 2022. The animal-human interface in farm animal production: Animal fear, stress, reproduction and welfare. Animals 12(4), 487.

A negative human-animal relationship (HAR) from the perspective of the animal is a limiting factor affecting farm animal welfare, as well as farm animal productivity. Research in farm animals has elucidated sequential relationships between stockperson...

Leyden, C., Brüggemann, T., Debinski, F. et al. 2022. Efficacy of tricaine (MS-222) and hypothermia as anesthetic agents for blocking sensorimotor responses in larval zebrafish. Frontiers in Veterinary Science 9, 864573.

Tricaine, or MS-222, is the most commonly used chemical anesthetic in zebrafish research. It is thought to act via blocking voltage-gated sodium channels, though its mechanism of action, particularly at the neuronal level, is not...

Lou, M. E., Kleinhenz, M. D., Schroeder, R. et al. 2022. Evaluating the utility of a CO2 surgical laser for piglet tail docking to reduce behavioral and physiological indicators of pain and to improve wound healing: A pilot study. Applied Animal Behaviour Science 254, 105720.

In the U.S. millions of commercially raised piglets are routinely tail docked. Human and veterinary medical patients experienced reduced inflammation, healing time and post-procedural pain using a CO2 surgical laser compared to standard surgical instruments...

Jang, J. Y., Liang, T., Kim, M.-K. et al. 2022. A rapid and noninvasive method that extracts polymerase chain reaction-ready genomic DNA from adult zebrafish. Zebrafish 19(4), 160-164.

Genotyping usually entails analysis of the products of polymerase chain reaction (PCR) carried out with genomic DNA (gDNA) as template, and is employed for validation of mutant or transgenic organisms. For genotyping of adult zebrafish...

Coutant, M., Malmkvist, J., Kaiser, M. et al. 2022. Piglets’ acute responses to local anesthetic injection and surgical castration: Effects of the injection method and interval between injection and castration. Frontiers in Veterinary Science 9, 1009858.

Although applied in some countries, efficacy of local anesthetics based on procaine to mitigate acute responses to piglet castration remains questioned. This paper presents results from a factorial study examining the effects of two methods...

Söbbeler, F. J., Wendt, S., Briese, A. et al. 2022. Comparative study of pain-related responses of male piglets up to seven days of age to the application of different local anaesthetics and subsequent castration. Animals 12(20), 2833.

To evaluate pain responses to intratesticular and subscrotal injection of three local anaesthetics and their efficacy during castration a randomized controlled study was conducted. In groups of 20 piglets, procaine (2%), lidocaine (2%), or mepivacaine...

Skade, L., Kristensen, C. S., Nielsen, M. B. F. et al. 2021. Effect of two methods and two anaesthetics for local anaesthesia of piglets during castration. Acta Veterinaria Scandinavica 63, 1.

Since January 2019, surgical castration of male piglets must be performed using local anaesthesia, if farmers deliver pigs to the primary exporting slaughterhouses according to the “Danish quality scheme”; a voluntary initiative taken by the...

Luna, D., González, C., Byrd, C. J. et al. 2021. Do domestic pigs acquire a positive perception of humans through observational social learning? Animals 11(1), 127.

Farm animals can perceive humans positively by observing another animal being positively handled. This study evaluated whether pigs acquire a positive perception of humans after observing either a high or low socially ranked conspecific receiving...

Hayes, M. E., Hemsworth, L. M., Morrison, R. S. et al. 2021. Effects of positive human contact during gestation on the behaviour, physiology and reproductive performance of sows. Animals 11(1), 214.

Previous positive interactions with humans may ameliorate the stress response of farm animals to aversive routine practices such as painful or stressful procedures, particularly those associated with stockpeople. We studied the effects of positive handling...

Owen, J. P., Kelsh, R. N. 2021. A suitable anaesthetic protocol for metamorphic zebrafish. PLOS ONE 16(3), e0246504.

Zebrafish are frequently used as a means to investigate development. These studies increasingly require repeated anaesthesia of zebrafish during juvenile (i.e. metamorphic) stages. The effects of anaesthesia during this time remain poorly studied. The aim...

Ly, L. H., & Weary, D. M. 2021. Facial expression in humans as a measure of empathy towards farm animals in pain. PLOS ONE 16(3), e0247808.

People often express concern for the welfare of farm animals, but research on this topic has relied upon self-report. Facial expressions provide a quantifiable measure of emotional response that may be less susceptible to social...

Chaumont, S., Freitas-de-Melo, A., Pinto-Santini, L., Menant, O. et al. 2021. Rams recognize and prefer the human who regularly brushed them. Applied Animal Behaviour Science 236, 105250.

Brushing produces a relaxing effect and improves the welfare of ewes and lambs and the human-animal relationship. Lambs gently handled during rearing are less fearful to humans in their adulthood, but there are few studies...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...