Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
White, L. J., Thomson, J. S., Pounder, K. C. et al. 2017. The impact of social context on behaviour and the recovery from welfare challenges in zebrafish, Danio rerio. Animal Behaviour 132, 189-199.

Understanding how animals experience stress in a laboratory environment is crucial for improving their welfare. Increasing numbers of fish are being used in scientific studies and further research is required to ensure appropriate conditions are...

Nordquist, R., van der Staay, F., van Eerdenburg, F. et al. 2017. Mutilating procedures, management practices, and housing conditions that may affect the welfare of farm animals: Implications for welfare research. Animals 7(2), 12.

A number of mutilating procedures, such as dehorning in cattle and goats and beak trimming in laying hens, are common in farm animal husbandry systems in an attempt to prevent or solve problems, such as...

Rapp-Santos, K. J., Altamura, L. A., Norris, S. L. et al. 2017. Comparison of saliva collection methods for the determination of salivary cortisol levels in rhesus macaques (Macaca mulatta), cynomolgus macaques (Macaca fascicularis), and African green monkeys (Chlorocebus aethiops). JAALAS 56(2), 181-189.

The ability to quickly and accurately determine cortisol as a biomarker for stress is a valuable tool in assessing the wellbeing of NHP. In this study, 2 methods of collecting saliva (a commercial collection device...

Jorgensen, M. J., Lambert, K. R., Breaux, S. D. et al. 2017. Pair housing of vervets/African green monkeys for biomedical research. American Journal of Primatology 79(1), e22501.

Vervets, also known as African green monkeys, are a nonhuman primate species widely used in biomedical research. However, there are currently few references available describing techniques and rates of success for pair‐housing this species. We...

Ross, A. P., Norvelle, A., Choi, D. C. et al. 2017. Social housing and social isolation: Impact on stress indices and energy balance in male and female Syrian hamsters (Mesocricetus auratus). Physiology & Behavior 177, 264-269.

Although Syrian hamsters are thought to be naturally solitary, recent evidence from our laboratory demonstrates that hamsters may actually prefer social contact. Hamsters increase their preference for a location associated with an agonistic encounter regardless...

Bulens, A., Van Beirendonck, S., Van Thielen, J. et al. 2017. Hiding walls for fattening pigs: Do they affect behavior and performance? Applied Animal Behaviour Science 195, 32-37.

The prevalence of harmful and unwanted behavior in fattening pigs is influenced by different factors including housing. Housing may include the opportunity to hide from aggressive pen mates and this ability is related to pen...

Mesarec, N., Prevolnik Povše, M., Škorjanc, D. et al. 2017. Gangs of piglets: Welfare and growth of imprinted and guided weaners. Applied Animal Behaviour Science 195, 44-49.

Weaning stress accompanied by outburst of aggression is a critical point in pig production as it compromises piglets’ welfare and leads to poor growth rate and health problems. Therefore, a weaning methods to smoothen the...

Axelsson, H. M. K., Hansen, S. W., Loberg, J. et al. 2017. Effects of group size on behaviour, growth and occurrence of bite marks in farmed mink. Applied Animal Behaviour Science 194, 112-119.

The aims of this study were to investigate the occurrence of stereotypic behaviours and the activity level in farmed mink when group housed in climbing cages and if group housing increase aggression by assessing the...

Reimert, I., Fong, S., Rodenburg, T. B. et al. 2017. Emotional states and emotional contagion in pigs after exposure to a positive and negative treatment. Applied Animal Behaviour Science 193, 37-42.

After-effects of events that elicit an emotional state on both the animals that experienced these events and on their group members have only scarcely been studied. We investigated effects of a positive vs. negative treatment...

Turner, S. P., Nevison, I. M., Desire, S. et al. 2017. Aggressive behaviour at regrouping is a poor predictor of chronic aggression in stable social groups. Applied Animal Behaviour Science 191, 98-106.

Commercial pigs globally are routinely mixed into new social groups. This results in regrouping aggression predominantly during the first 24h which compromises welfare and productivity. Chronic aggression persists thereafter and is also undesirable. Management strategies...

Greenwood, E. C., Plush, K. J., van Wettere, W.H.E.J. et al. 2017. A novel method for the analysis of social structure allows in-depth analysis of sow rank in newly grouped sows. Applied Animal Behaviour Science 189, 29-35.

Chronic stress response in fearful animals can result in depression of growth and reproductive performance. It is therefore important to be aware of at risk animals in the herd. Thus far ‘hierarchy’ calculations have involved...

Parois, S., Larzul, C., Prunier, A. 2017. Associations between the dominance status and sexual development, skin lesions or feeding behaviour of intact male pigs. Applied Animal Behaviour Science 187, 15-22.

In boars, social relationships could influence pubertal development and feeding behaviour. The objectives of the present study were to determine the relationships between behaviour (agonistic, mounting and feeding behaviours), plasma sex steroids (oestradiol, testosterone) and...

Sutherland, M. A., Backus, B. L., Brooks, T. A. 2017. The effect of needle-free administration of local anesthetic on the behavior and physiology of castrated pigs. Journal of Veterinary Behavior 21, 71-76.

Pigs are routinely castrated in many countries without giving pain relief, which is an animal welfare concern. The objectives of this study were to evaluate the stress caused by administering local anesthetic (LA) using a...

Sands, C., Evans, C., Buckmaster, C. A. 2017. The grooming sleeve: Encouraging conspecific-like behavior and strengthening the human-animal bond. Laboratory Animal Science Professional 5(2) (June), 52-53.

The act of grooming has been found to greatly decrease stress, heart rate, and cortisol levels in nonhuman primates; this decrease in stress and cortisol is seen in the animal being groomed, as well as...

Daoudi, S., Badihi, G., Buchanan-Smith, H. 2017. Is mixed-species living cognitively enriching? Enclosure use and welfare in two captive groups of tufted capuchins (Sapajus apella) and squirrel monkeys (Saimiri sciureus). Animal Behavior and Cognition 4(1).

Non-human primates have complex relationships with conspecifics and also other animals with whom they share their habitat in the wild. Some primates, such as capuchin monkeys (Sapajus apella) and squirrel monkeys (Saimiri sciureus), naturally associate...

Fu, L., Li, H., Lian, T. et al. 2016. Stocking density affects welfare indicators of growing pigs of different group sizes after regrouping. Applied Animal Behaviour Science 174, 42-50.

In recent years, the concept of animal welfare began to be accepted by the Chinese people. On some intensive pig farms, the stocking density for growing pigs is too great, leading to decreased animal welfare...

Brown, J. L., Paris, S., Prado-Oviedo, N. A. 2016. Reproductive health assessment of female elephants in North American zoos and association of husbandry practices with reproductive dysfunction in African Elephants (Loxodonta africana). PLOS ONE 11(7), e0145673.

As part of a multi-institutional study of zoo elephant welfare, we evaluated female elephants managed by zoos accredited by the Association of Zoos and Aquariums and applied epidemiological methods to determine what factors in the...

Holdgate, M. R., Meehan, C. L., Hogan, J. N. et al. 2016. Walking behavior of zoo elephants: Associations between GPS-measured daily walking distances and environmental factors, social factors, and welfare indicators. PLOS ONE 11(7), e0150331.

Research with humans and other animals suggests that walking benefits physical health. Perhaps because these links have been demonstrated in other species, it has been suggested that walking is important to elephant welfare, and that...

van Dixhoorn, I. D. E., Reimert, I., Middelkoop, J. et al. 2016. Enriched housing reduces disease susceptibility to co-infection with porcine reproductive and respiratory virus (PRRSV) and Actinobacillus pleuropneumoniae (A. pleuropneumoniae) in young pigs. PLOS ONE 11(9), e0161832.

Until today, anti-microbial drugs have been the therapy of choice to combat bacterial diseases. Resistance against antibiotics is of growing concern in man and animals. Stress, caused by demanding environmental conditions, can reduce immune protection...

Meehan, C. L., Hogan, J. N., Bonaparte-Saller, M. K. et al. 2016. Housing and social environments of African (Loxodonta africana) and Asian (Elephas maximus) elephants in North American zoos. PLOS ONE 11(7), e0146703.

We evaluated 255 African (Loxodonta africana) and Asian (Elephas maximus) elephants living in 68 North American zoos over one year to quantify housing and social variables. All parameters were quantified for the both the day...

Holdgate, M. R., Meehan, C. L., Hogan, J. N. et al. 2016. Recumbence behavior in zoo elephants: Determination of patterns and frequency of recumbent rest and associated environmental and social factors. PLOS ONE 11(7), e0153301.

Resting behaviors are an essential component of animal welfare but have received little attention in zoological research. African savanna elephant (Loxodonta africana) and Asian elephant (Elephas maximus) rest includes recumbent postures, but no large-scale investigation...

Thomsson, O., Sjunnesson, Y., Magnusson, U. et al. 2016. Consequences for piglet performance of group housing lactating sows at one, two, or three weeks post-farrowing. PLOS ONE 11(6), e0156581.

Housing lactating sows with piglets in a multi-suckling pen from around 14 days post-farrowing is common practice in Swedish organic piglet production. However, nursing-suckling interaction is less frequent in multi-suckling pens than in individual farrowing...

Hothersall, B., Whistance, L., Zedlacher, H. et al. 2016. Standardising the assessment of environmental enrichment and tail-docking legal requirements for finishing pigs in Europe. Animal Welfare 25(4), 499-515.

An online training package providing a concise synthesis of the scientific data underpinning EU legislation on enrichment and tail-docking of pigs was produced in seven languages, with the aim of improving consistency of professional judgements...

Suriyampola, P. S., Shelton, D. S., Shukla, R. et al. 2016. Zebrafish social behavior in the wild. Zebrafish 13(1), 1-8.

Wild zebrafish exhibit a wide range of behavior. We found abundant wild zebrafish in flowing rivers and still water, in large, tightly-knit groups of hundreds of individuals, as well as in small, loose shoals. In...

Plush, K., Hughes, P., Herde, P. et al. 2016. A synthetic olfactory agonist reduces aggression when sows are mixed into small groups. Applied Animal Behaviour Science 185, 45-51.

Synthetic olfactory agonists mimic odours secreted by mammary glands in several mammal species and their application can reduce anxiety levels in both juvenile and adult animals. This investigation determined the effect of a commercially available...