Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Nagy-Reis, M. B., Mendonça-Furtado, O., Resende, B. 2019. Do social factors related to allostatic load affect stereotypy susceptibility? Management implications for captive social animals. Animal Welfare 28(2), 183-190.

Stereotypies are frequently associated with sub-optimal captive environments and are used as welfare indicators. However, susceptibility to stereotypy can vary across individuals of the same group. As such, identifying which individuals are more susceptible to...

Stanger, K. J., Kells, N. J., Fisher, A. D. et al. 2019. Evaluation of euthanasia of sheep with intravenous saturated salt solutions to enable the collection of whole, intact brains. Animal Welfare 28(4), 397-406.

Captive bolts or firearms are unsuitable for euthanasia of livestock when an intact brain is required for diagnostics. Injectable barbiturates can be used, but this method carries risk of poisoning animals eating the carcase. Intravenous...

Bouwsema, J. A., Lines, J. A. 2019. Could low atmospheric pressure stunning (LAPS) be suitable for pig slaughter? A review of available information. Animal Welfare 28(4), 421-432.

Low atmospheric pressure stunning (LAPS) is a slaughter technique which may be less stressful for pigs (Sus scrofa domestica) than current commercial stunning and slaughter methods. The main methods used currently for slaughtering pigs are...

Axiak Flammer, S., Eskes, C., Kohler, I. et al. 2019. Alternatives to carbon dioxide—Taking responsibility for humanely ending the life of animals. Animals 9(8), 482.

Carbon dioxide (CO2) is commonly used to kill rodents. However, a large body of research has now established that CO2 is aversive to them. A multidisciplinary symposium organized by the Swiss Federal Food Safety and...

Portele, K., Scheck, K., Siegmann, S. et al. 2019. Sow-piglet nose contacts in free-farrowing pens. Animals 9(8), 513.

Nose contact is a frequent form of social behaviour in pigs, but the motivational reasons underlying this behaviour remain unclear. We investigated the frequency, direction and type of sow–piglet nosing behaviour and its association with...

Steiner, A. R., Axiak Flammer, S., Beausoleil, N. J. et al. 2019. Humanely ending the life of animals: Research priorities to identify alternatives to carbon dioxide. Animals 9(11), 911.

The use of carbon dioxide (CO2) for stunning and killing animals is considered to compromise welfare due to air hunger, anxiety, fear, and pain. Despite decades of research, no alternatives have so far been found...

McNamara, A., Allen, L. 2019. Bottle or bowl? Feeding and dosing in juvenile Göttingen minipigs. Animal Technology and Welfare 18(2), 153-154. (IAT Congress 2018 Poster Presentation)

The Laboratory Animal Technology department at Envigo were engaged to perform a toxicity study in juvenile Göttingen Minipigs. The test compound was a human milk formula additive. Therefore, to mimic the conditions of clinical administration...

Moser, J., Burla, J.-B., Gygax, L. 2019. Executing specific foraging behaviours does not represent a general goal state of foraging in dry sows (Sus scrofa). Behavioural Processes 164, 115-122.

Intensively housed domestic pigs (Sus scrofa) have little opportunity to perform diverse foraging behaviour though they still seem strongly motivated to do so. Here, we investigated whether the execution of specific behaviours may in itself...

Chatigny, F. 2019. The controversy on fish pain: A veterinarian’s perspective. Journal of Applied Animal Welfare Science 22(4), 400-410.

Fish welfare is still a relatively new field. As such, regulations and protocols to ensure fish welfare are currently limited and vary considerably in different jurisdictions. This is in part because of the ongoing controversy...

Domingues, R. R., Garrone-Neto, D., Hilsdorf, A. W. S. et al. 2019. Use of mucus as a non-invasive sampling method for DNA barcoding of stingrays and skates (batoid elasmobranchs). Journal of Fish Biology 94(3), 512-516.

In this study we tested the use of mucus from five species of Neotropical marine batoid elasmobranchs to extract genomic DNA for barcoding and phylogenetic analysis. The DNA from all individuals sampled was successfully amplified...

Animal Welfare Institute. 2019. Let’s get serious about animal play. AWI Quarterly 68(3) Fall, 19.

This article describes the importance of providing laboratory animals with opportunities to engage in play, and provides a few practical ideas for how to do this.

Warwick, C., Arena, P., Steedman, C. 2019. Spatial considerations for captive snakes. Journal of Veterinary Behavior 30, 37-48.

Captive environments for snakes commonly involve small enclosures with dimensions that prevent occupants from adopting straight line body postures. In particular, the commercial, hobby, and pet sectors routinely utilize small vivaria and racking systems, although...

Anders, N., Roth, B., Grimsbø, E. et al. 2019. Assessing the effectiveness of an electrical stunning and chilling protocol for the slaughter of Atlantic mackerel (Scomber scombrus). PLOS ONE 14(9), e0222122.

Inducing unconsciousness in fish using electrical stunning prior to slaughter may improve fish welfare and fillet quality if such practises can be disseminated into wild capture fisheries. The objectives of this study were to: 1)...

Carbonara, P., Dioguardi, M., Cammarata, M. et al. 2019. Basic knowledge of social hierarchies and physiological profile of reared sea bass Dicentrarchus labrax (L.). PLOS ONE 14(1), e0208688.

The effects of social hierarchies (dominant/subordinate individuals), such as aggressiveness, feeding order, and territoriality, are some of the characteristics used for describing fish behaviour. Social hierarchy patterns are still poorly understood in European-reared sea bass...

Anderson, J. R., Ang, M. Y. L., Lock, L. C. et al. 2019. Nesting, sleeping, and nighttime behaviors in wild and captive great apes. Primates 60(4), 321–332.

The past few decades have seen a burgeoning of scientific studies on great apes’ use of nests for sleeping in the wild, as well as their nesting behavior and sleep in captivity. We review recent...

Sundin, J., Morgan, R., Finnøen, M. H. et al. 2019. On the observation of wild zebrafish (Danio rerio) in India. Zebrafish 16(6), 546-553.

Zebrafish is one of the world's most widely used laboratory species, and it is utilized to answer important research questions in disparate fields such as biomedicine, genetics, developmental biology, pharmacology, toxicology, physiology, and evolution. Despite...

Dunford, K., Hakkesteeg, J., Wilson, C. 2019. Stiff as a board: Measuring rigor mortis in zebrafish. Animal Technology and Welfare 18(3), 203-205.

Schedule one killing (S1K) methods require a two-step process: a humane method of death, typically for Zebrafish an anaesthetic overdose and confirmation of death, such as confirmation of rigor mortis. There is widespread variation of...

Bartley, J. 2019. Darwin’s fishes?: Keeping Malawi cichlids. Animal Technology and Welfare 18(3), 199-202.

This poster will provide information on the cichlids, including their dietary and husbandry requirements and the breeding of these animals.

Weller, J. E., Camerlink, I., Turner, S. P. et al. 2019. Playful pigs: Early life play-fighting experience influences later life contest dynamics. Animal Behaviour 158, 269-279.

Animal contests are costly and predicted to be won by the individual with the higher resource-holding potential (RHP). Weight is often used a proxy for RHP; however, victory does not always go to the heaviest...

Thurman, C. E., Rasmussen, S., Prestia, K. A. 2019. Effect of 3 euthanasia methods on serum yield and serum cortisol concentration in zebrafish (Danio rerio). JAALAS 58(6), 823–828.

Zebrafish are an important model in neuroscience and developmental biology and are also an emerging model in hematology and immunology. Little information is available for zebrafish regarding the physiologic impact of different euthanasia methods and...

Špinka, M. 2019. Animal agency, animal awareness and animal welfare. Animal Welfare 28(1), 11–20.

In nature, animals need to actively engage with the environment in order to prosper in survival and reproduction. Hence, agency is a central adaptive characteristic of animal life. In this paper, I propose that from...

Lambert, C. J., Freshner, B. C., Chung, A. et al. 2018. An automated system for rapid cellular extraction from live zebrafish embryos and larvae: Development and application to genotyping. PLOS ONE 13(3), e0193180.

Zebrafish are a valuable model organism in biomedical research. Their rapid development, ability to model human diseases, utility for testing genetic variants identified from next-generation sequencing, amenity to CRISPR mutagenesis, and potential for therapeutic compound...

Santurtun, E., Broom, D. M., Phillips, C. J. C. 2018. A review of factors affecting the welfare of Atlantic salmon (Salmo salar). Animal Welfare 27(3), 193-204.

In the expanding salmon industry, many farmers use production methods that could result in poor welfare of the fish at various points of their lifecycle. We have reviewed methods used for producing salmon for food...

Kells, N. J., Beausoleil, N. J., Sutherland, M. A. et al. 2018. Electroencephalographic responses of anaesthetised pigs to intraperitoneal injection of sodium pentobarbital. Animal Welfare 27(3), 205-214.

Small laboratory animals are commonly euthanased via intraperitoneal (IP) injection of sodium pentobarbital. However, there is concern that animals may experience pain prior to loss of consciousness with this delivery route. The present study investigated...

Golledge, H., Carter, E. 2018. Welfare of fish farmed in the EU during transport and at slaughter. Animal Welfare 27(3), 287-288.

This Report, commissioned by the European Commission, summarises the current state of transport and slaughter practices in the aquaculture industry within eleven case-study countries in the European Economic Area (EAA). Comparisons are also made with...