Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Golledge, H., Richardson, C. (Eds.) 2024. The UFAW Handbook on the Care and Management of Laboratory and Other Research Animals (9th ed.). Wiley-Blackwell. 1040 p.

The latest edition of the seminal reference on the care and management of laboratory and research animals. The newly revised ninth edition of The UFAW Handbook on the Care and Management of Laboratory and Other...

Xu, C., Qiu, N., Yu, F. et al. 2024. The effect of isolation on laboratory rare minnow (Gobiocypris rarus): Growth, behavior and physiology. Applied Animal Behaviour Science 271, 106153.

Laboratory fish play an important role in modern scientific research. More and more researchers have begun to pay attention to the other living environment except the physical and chemical factors of the water body, because...

Robinson, L. M., Weiss, A. (Eds.) 2023. Nonhuman Primate Welfare: From History, Science, and Ethics to Practice. Springer, Cham, Switzerland. 671 p.

This volume reviews the broad topic of welfare in nonhuman primates under human care. Chapters detail the history of primates in captivity, ethical and legal issues surrounding the use of nonhuman primates as entertainment or...

Almeida, M. M., Cabrita, E., Fatsini, E. 2023. The use of sand substrate modulates dominance behaviour and brain gene expression in a flatfish species. Animals 13(6), 978.

Physical complexity adds physical enrichment to rearing conditions. This enrichment promotes fish welfare and reduces detrimental characteristics that fish develop in captivity. Senegalese sole (Solea senegalensis) is an important species for European aquaculture, where it...

Novák, J., Frynta, D., Nováková, D. et al. 2023. Social deprivation in maternal mouthbrooders Tropheus sp. “Caramba” (Teleostei: Cichlidae) decreases the success rate of reproduction and survival rate of fish fry. Scientific Reports 13(1), 8284.

Early offspring separation from mothers causes social deprivation. Mouthbrooding, when eggs and fry are incubated in the buccal cavity of the parent, is one of the reproductive strategies in fish. The mother is the incubating...

Warwick, C., Pilny, A., Steedman, C. et al. 2023. Mobile zoos and other itinerant animal handling events: Current status and recommendations for future policies. Animals 13(2), 214.

Mobile zoos are events in which non-domesticated (exotic) and domesticated species are transported to venues such as schools, hospitals, parties, and community centres, for the purposes of education, entertainment, or social and therapeutic assistance. We...

Alef, R., Blaser, R. E. 2023. Social group during housing and testing modulates the effect of ethanol on zebrafish (Danio rerio) behavior. Behavioural Processes 209, 104877.

Zebrafish (Danio rerio) are a popular model organism in behavioral pharmacology research due to many genetic and neurological similarities with humans. As a social species, the presence (or absence) of conspecifics during housing and testing...

Brando, S., Norman, M. 2023. Handling and training of wild animals: Evidence and ethics-based approaches and best practices in the modern zoo. Animals 13(14), 2247.

There is an ethical responsibility to provide all animals living in human care with optimal and positive well-being. As animals living in zoos and aquariums frequently interact with their human caregivers as part of their...

Cameron, A. S., Rub, A. M. W., Sandford, B. P. 2023. Evaluation of healing progression at surgical incision sites and the use of antiseptics for enhancing post-operative survival in subyearling Chinook salmon (Oncorhynchus tshawytscha). PLOS ONE 18(7), e0288056.

In an attempt to develop more effective surgical implantation methods for fish, surgical incisions typical of those made for implanting micro-acoustic transmitters into the peritoneal cavity were evaluated on a weekly basis for healing progression...

Chikamura, Y., Takahashi, K., Masuda, R. 2023. A mixed-species shoal including fewer heterospecifics is preferred by jack mackerel Trachurus japonicus juveniles. Behavioural Processes 211, 104930.

Mixed-species shoals of fishes were reported from various environments such as coral reefs and temperate lakes. The driving mechanism of forming mixed-species shoal can be either haphazard or a preferential choice by an individual. Here...

Miller, S. L., Leri, F., Pushinsky, A. et al. 2023. Zebrafish (Danio rerio) distinguish between two human caretakers and their associated roles within a captive environment. Applied Animal Behaviour Science 267, 106053.

Zebrafish have become a popular biomedical model in recent decades, and are now maintained in laboratories worldwide. However, living within a captive environment can introduce novel environmental stressors and experiencing stress chronically can negatively affect...

Barki, A., Cnaani, A., Biran, J. 2022. How does temperature affect aggression during and after dominance hierarchy formation in Nile tilapia? Applied Animal Behaviour Science 247, 105563.

Social animals commonly establish dominance relationships by means of aggressive interaction, leading to hierarchical stability and priority of access to limited resources by high-ranked individuals. In poikilothermic animals, temperature is a major abiotic factor influencing...

Nicolis, I. N., Beale, C. N., Bidot, W. A. et al. 2022. Performance and consistency of circulating warm water blankets for rodents. JAALAS 61(1), 96-100.

General anesthesia as used for rodent research can have adverse effects on physiologic mechanisms. Thermoregulation is often greatly inhibited, with resultant deleterious effects on cardiac and respiratory function. These potential effects can be mitigated by...

Orient, E., Guillén‐Salazar, F. 2022. Evaluation of social compatibility in an all‐male group of chimpanzees (Pan troglodytes) by means of social network analysis. Zoo Biology 41(1), 84-93.

The study here presented provides preliminary data regarding social compatibility of an all-male group of five chimpanzees (Pan troglodytes), assessed by means of a social network analysis (SNA). The study was conducted at the Fundació...

Fultz, A., Yanagi, A., Breaux, S. et al. 2022. Aggressive, submissive, and affiliative behavior in sanctuary chimpanzees (Pan Troglodytes) during social integration. Animals 12(18), 2421.

Chimp Haven is a sanctuary for chimpanzees being retired from biomedical research and from facilities that can no longer care for them. Chimpanzees often live in smaller groups in captive settings; however, Chimp Haven integrates...

dos Santos Gauy, A. C., Bolognesi, M. C., Gonçalves-de-Freitas, E. 2022. Long-term body tactile stimulation reduces aggression and improves productive performance in Nile tilapia groups. Scientific Reports 12(1), 20239.

One concern of the Anthropocene is the effects of human activities on animal welfare, revealing the urgency to mitigate impacts of rearing environments. Body tactile stimulation (TS), like massage therapy, has emerged as an enrichment...

Escribano, D., Doldán-Martelli, V., Cronin, K. A. et al. 2022. Chimpanzees organize their social relationships like humans. Scientific Reports 12(1), 16641.

Human relationships are structured in a set of layers, ordered from higher (intimate relationships) to lower (acquaintances) emotional and cognitive intensity. This structure arises from the limits of our cognitive capacity and the different amounts...

Camargo-Dos-Santos, B., Bellot, M. S., Guermandi, I. I. et al. 2022. Cannabidiol improves Nile tilapia cichlid fish welfare. Scientific Reports 12(1), 17650.

Cannabidiol (CBD) is a substance derived from Cannabis sativa, widely studied in medicine for controlling neural diseases in humans. Besides the positive effects on humans, it also presents anxiolytic proprieties and decreases aggressiveness and stress...

Ojelade, O. C., Durosaro, S. O., Akinde, A. O. et al. 2022. Environmental enrichment improves the growth rate, behavioral and physiological response of juveniles of Clarias gariepinus under laboratory conditions. Frontiers in Veterinary Science 9, 980364.

Environmental enrichment (EE) improves the growth rate and welfare of some cultured fishes. However, most cultured fish species are raised in non-enriched housing conditions. Clarias gariepinus is an important commercial fish species, but little is...

Gilmour, K. M., Bard, B. 2022. Social buffering of the stress response: Insights from fishes. Biology Letters 18(10), 20220332.

Social buffering of stress refers to the effect of a social partner in reducing the cortisol or corticosterone response to a stressor. It has been well studied in mammals, particularly those that form pair bonds...

Funkhouser, J. A., Mayhew, J. A., Mulcahy, J. et al. 2021. Human caregivers are integrated social partners for captive chimpanzees. Primates 62(2), 297–309.

In a captive environment, it is challenging to ensure the highest level of social and psychological well-being for species with naturally complex social organizations and structures. There is a growing need to meet the social...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Fife-Cook, I., Franks, B. 2021. Koi (Cyprinus rubrofuscus) seek out tactile interaction with humans: General patterns and individual differences. Animals 11(3), 706.

The study of human–animal interactions has provided insights into the welfare of many species. To date, however, research has largely focused on human relationships with captive mammals, with relatively little exploration of interactions between humans...

Camargo-dos-Santos, B., Carlos, C. L., Favero-Neto, J. et al. 2021. Welfare in Nile tilapia production: Dorsal fin erection as a visual indicator for insensibility. Animals 11(10), 3007.

In aquaculture, to ensure animal welfare in pre-slaughter and slaughter stages, it is fundamental that fish are insensible. A method for evaluating fish insensibility is based on visual sensibility indicators (VSI) assessment (i.e., self-initiated behavior...

da Silva Medeiros Elidio, H., Coelho, J. W. R., Cavalcanti Pereira da Silva, L. C. et al. 2021. Housing density and aggression in Syrian hamsters. JAALAS 60(5), 506-509.

The Syrian hamster (Mesocricetus auratus) is a solitary and naturally territorial animal, with female hamsters being more aggressive than males. This behavior makes handling difficult because they are usually housed in groups, which can lead...