Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Allen, P. J., Baumgartner, W., Brinkman, E. et al. 2018. Fin healing and regeneration in sturgeon. Journal of Fish Biology 93(5), 917-930.

Pectoral fin healing in fin spines and rays were examined in juvenile Atlantic sturgeon Acipenser oxyrinchus oxyrinchus following three different sampling techniques (n = 8-9 fish per treatment): entire leading fin spine removed, a 1-2...

Omidi, A., Jafari, R., Nazifi, S. et al. 2018. Potential role for selenium in the pathophysiology of crib-biting behavior in horses. Journal of Veterinary Behavior 23, 10-14.

Crib-biting is a repetitive and compulsive behavior that is characterized by “grasping a fixed object with incisor teeth and aspirating air with an audible grunt.” Little is known about etiology and pathophysiology of crib-biting behavior...

Unakafov, A. M., Möller, S., Kagan, I. et al. 2018. Using imaging photoplethysmography for heart rate estimation in non-human primates. PLOS ONE 13(8), e0202581.

For humans and for non-human primates heart rate is a reliable indicator of an individual’s current physiological state, with applications ranging from health checks to experimental studies of cognitive and emotional state. In humans, changes...

Ekesbo, I., Gunnarsson, S. 2018. Farm Animal Behaviour: Characteristics for Assessment and Welfare (2nd ed). CABI, Wallingford, UK.

Completely updated and revised, and with a new author team, this second edition of Farm Animal Behaviour continues to provide essential information on normal and stereotypic behaviors in a wide variety of farm animals to...

Chatigny, F., Kamunde, C., Creighton, C. M. et al. 2017. Uses and doses of local anesthetics in fish, amphibians, and reptiles. JAALAS 56(3), 244-253.

Local anesthetics are an integral part of routine pain management in mammals, yet their use is relatively limited in fish, amphibians and reptiles. These animals frequently undergo potentially painful surgical procedures and therefore could possibly...

Parkinson, L., Mans, C. 2017. Anesthetic and postanesthetic effects of alfaxalone–butorphanol compared with dexmedetomidine–ketamine in chinchillas (Chinchilla lanigera). JAALAS 56(3), 290-295.

Effective and safe anesthetic protocols are required for a variety of surgical and diagnostic procedures in chinchillas. Alfaxalone, a new anesthetic agent in the United States, can be administered intramuscularly and subcutaneously and is therefore...

Martin, A. L. 2017. Theprimatologist as a behavioral engineer. American Journal of Primatology 79, e22500.

The field of primate behavior management has had only limited success in preventing and treating abnormal behaviors, such as stereotypy and self‐injury, in captive non‐human primates (NHP). In contrast, applied behavior analysts have had great...

Albright, J., Sun, X., Houpt, K. 2017. Does cribbing behavior in horses vary with dietary taste or direct gastric stimuli? Applied Animal Behaviour Science 189, 36-40.

Concentrated feed diets have been shown to drastically increase the rate of the cribbing, an oral stereotypy in horses, but the specific component causing the rise has not been identified. Furthermore, the mechanism through which...

Górecka-Bruzda, A., Jaworski, Z., Suwała, M. et al. 2017. Aversiveness of husbandry procedures for pre-weaned foals: A comparison using behavioural and physiological indices. Applied Animal Behaviour Science 191, 31-38.

Husbandry procedures are necessary for different purposes in horse breeding. The aim of the present study was to assess the aversiveness and effects on the horse-human relationship of a range of common husbandry procedures, in...

Vullo, C., Carluccio, A., Robbe, D. et al. 2017. Guaiphenesin-ketamine-xylazine infusion to maintain anesthesia in mules undergoing field castration. Acta Veterinaria Scandinavica 59(1), 67.

In order to determine whether a combination of guaiphenesin, ketamine and xylazine can induce safe and satisfactory anaesthesia in mules undergoing field castration, eight healthy adult intact male mules were employed. They were premedicated with...

Roberts, K., Hemmings, A. J., McBride, S. D. et al. 2017. Causal factors of oral versus locomotor stereotypy in the horse. Journal of Veterinary Behavior 20, 37-43.

Stereotypic behaviors are commonly observed in domestic equids as they are in a range of captive nondomesticated species. Estimates suggest that 19.5%-32.5% of horses perform a stereotypy. The presence of these behaviors is thought to...

Franchi, V., Aleuy, O. A., Tadich, T. A. 2016. Fur chewing and other abnormal repetitive behaviors in chinchillas (Chinchilla lanigera), under commercial fur-farming conditions. Journal of Veterinary Behavior 11, 60-64.

Fur chewing is a behavioral disorder frequently reported in chinchillas kept for fur-farming purposes. Rodents kept in barren cages usually develop some form of abnormal repetitive behavior, which can indicate a past or present welfare...

Caron, A., Lelong, C., Pascual, M. H. et al. 2015. Miniaturized blood sampling techniques to benefit reduction in mice and refinement in nonhuman primates: Application to bioanalysis in toxicity studies with antibody-drug conjugates. JAALAS 54(2), 145-152.

Minimizing the number of animals in regulatory toxicity studies while achieving study objectives to support the development of future medicines contributes to good scientific and ethical practices. Recent advances in technology have enabled the development...

Bloomsmith, M., Kim, N., Franklin, A. et al. 2015. Positive reinforcement methods to train chimpanzees to cooperate with urine collection. JAALAS 54, 66-69.

Positive reinforcement training can be used in many ways to enhance the welfare of captive primates. Training for biologic sample collection is one application of positive reinforcement training. In this study, 35 adult female chimpanzees...

Bayne, K. A., Beaver, B. V., Mench, J. A. et al. 2015. Laboratory animal behavior. In: Laboratory Animal Medicine, 3rd edition. Fox, J. G., Anderson, L., Otto, G., et al. (eds). Elsevier, Inc., Amsterdam, NL. pp. 1617-1651.

The study of laboratory animal behavior has increased steadily over the last decade, with expanding emphasis on a variety of commonly used species. In the United States, this trend was initially focused on species for...

Reamer, L. A., Haller, R. H., Thiele, E. J. et al. 2014. Factors affecting initial training success of blood glucose testing in captive chimpanzees (Pan troglodytes). Zoo Biology 33(3), 212-220.

Type 2 diabetes can be a problem for captive chimpanzees. Accurate blood glucose (BG) readings are necessary to monitor and treat this disease. Thus, obtaining voluntary samples from primates through positive reinforcement training (PRT) is...

Bulens, A., Beirendonck, S., Van Thielen, J. et al. 2013. The enriching effect of non-commercial items in stabled horses. Applied Animal Behaviour Science 143(1), 46-51.

The effect of the provision of simple objects to stabled horses on their behaviour was investigated to determine whether these objects can affect horses' behaviour in a positive way and thus enrich their environment. A...

Bloomsmith, M., Franklin, A., Neu, K. et al. 2013. Training time required to collect a variety of biological samples using primarily positive reinforcement training methods. American Journal of Primatology 75(S1), 65. (36th Meeting of the American Society of Primatologists Scientific Program, Abstract #112)

Positive reinforcement training (PRT) methods can be applied to gain the voluntary cooperation of laboratory primates with the collection of biological samples. Information will be provided on training techniques used and the amount of training...

Coleman, K. 2012. Individual differences in temperament and behavioral management practices for nonhuman primates. Applied Animal Behaviour Science 137(3-4), 106-113.

This review will examine how individual differences in temperament might affect, or be affected by, behavioral management practices for captive primates. Measuring temperament may help us predict the outcome of social introductions. It can also...

Pomerantz, O., Terkel, J., Suomi, S. J. et al. 2012. Stereotypic head twirls, but not pacing, are related to a ‘pessimistic’-like judgment bias among captive tufted capuchins (Cebus apella). Animal Cognition 15(4), 689–698.

Abnormal stereotypic behaviour is widespread among captive non-human primates and is generally associated with jeopardized well-being. However, attributing the same significance to all of these repetitive, unvarying and apparently functionless behaviours may be misleading, as...

Fultz, A., Brent, L., Loeser, E. 2010. Abnormal behaviors in sanctuary chimpanzees (Pan troglodytes). American Journal of Primatology 72(S1), 28-29. (33rd Meeting of the American Society of Primatologists Scientific Program, Abstract #10)

Chimp Haven has retired 153 chimpanzees, the majority from biomedical research, and abnormal behavior patterns have been reported. Abnormal behaviors are well described in chimpanzees and usually related to early rearing environment, social isolation and...

Egeler, J. L., Hoekwater, S., Hoffman, H. D. 2010. Monitoring program for the treatment of nonhuman primates with behavioral disorders. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 717 (Abstract #P113).

Maintaining the psychologic wellbeing of nonhuman primates housed in a laboratory setting is an important aspect in providing the best possible care for these animals. Nonhuman primates kept in captivity can begin to display abnormal...

Videan, E. N., Ely, J., Lammey, M. et al. 2008. Successful elimination of self-injurious behavior (SIB) in a chimpanzee (Pan troglodytes): a case study using a combination of risperidone and environmental enrichment. American Journal of Primatology 70(S1), 50. (31st Meeting of the American Society of Primatologists Scientific Program, Abstract #91)

Self-injurious behavior (SIB) can result in open wounds, tissue damage, and increased risk of infection. In many cases, increased environmental enrichment is not consistently effective in eliminating this behavior. We report here on the successful...

Schapiro, S. J. 2005. Chimpanzees used in research: Voluntary blood samples differ from anesthetized samples. AWI Quarterly 54(3) (Summer), 15-16.

Chimpanzees were successfully trained to cooperate during injection and blood collection.

Luzzi, M., Skoumbourdis, E., Baumans, V. et al. 2005. Collecting blood from rodents: A discussion by the Laboratory Animal Refinement and Enrichment Forum. Animal Technology and Welfare 4, 99-102.

The question was asked: "In your own experience, what is the least disturbing technique - from the subject's point of view! - of blood collection for rodents?" In summary, it is fair to conclude the...