Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Bakker, J., Ouwerling, B., Hedit, P. J. et al. 2015. Advantages and risks of housing changes to improve animal wellbeing in a breeding colony of common marmosets (Callithrix jacchus). JAALAS 54(3), 273-279.

Between 1975 and 2014, housing conditions for laboratory-housed marmosets changed dramatically after the introduction of new guidelines designed to improve their care and wellbeing. According to these guidelines, our facility provided marmosets with outside enclosures...

Brown, C. 2015. Fish intelligence, sentience and ethics. Animal Cognition 18(1), 1-17.

Fish are one of the most highly utilised vertebrate taxa by humans; they are harvested from wild stocks as part of global fishing industries, grown under intensive aquaculture conditions, are the most common pet and...

Blois-Heulin, C., Rochais, C., Camus, S. et al. 2015. Animal welfare: Could adult play be a false friend? Animal Behavior and Cognition 2(2), 156–185.

There is no consensus regarding the functions of play. As play behavior is a characteristic of young stages of development, it has been suggested that the higher prevalence of adult play observed in domestic animals...

York, C. A., Schulte, B. A. 2014. The relationship of dominance, reproductive state and stress in female horses (Equus caballus). Behavioral Processes 107, 15-21.

Maintaining a dominant position in a hierarchy requires energetically expensive aggressive displays and physical exertion. Lab based winner–loser studies, often conducted with individuals from non-social species, have shown that subordinates have higher stress hormone levels...

Sneddon, L. U., Elwood, R. W., Adamo, S. A. et al. 2014. Defining and assessing animal pain. Animal Behaviour 97, 201-212.

The detection and assessment of pain in animals is crucial to improving their welfare in a variety of contexts in which humans are ethically or legally bound to do so. Thus clear standards to judge...

Siniscalchi, M., Padalino, B., Lusito, R. et al. 2014. Is the left forelimb preference indicative of a stressful situation in horses? Behavioral Processes 107, 61-67.

Evidence for behavioural and brain lateralisation is now widespread among the animal kingdom; lateralisation of limb use (pawedness) occurs in several mammals including both feral and domestic horses. We investigated limb preferences in 14 Quarter...

Burlingame, L. A., Na, J., Dunbar, M. et al. 2014. Behavioral ethogram as a health assessment tool in a feline vaccine study. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 610. (Abstract #P227).

For infectious disease studies, assessment of feline health is traditionally limited to metrics such as body temperature (BT), change in body weight (BW), and clinical signs (CS). Recently, behavioral ethograms designed for assessment of rabbits...

Dunbar, M. L., David, E. M., Aline, M. R. et al. 2014. Validation of a novel behavioral ethogram for identification of postoperative pain in the guinea pig (Cavia porcellus). American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 538 (Abstract #PS48).

Although the guinea pig (Cavia porcellus) has been used in research for over a century and remains one of the most prevalent AWA covered species today, very little has been elucidated in the literature about...

Bergman, T. J., Sheehan, M. J. 2013. Social knowledge and signal in primates. American Journal of Primatology 75(7), 683-694.

Primates are notable for having a rich and detailed understanding of their social environment and there has been great interest in the evolution and function of social knowledge in primates. Indeed, primates have been shown...

Lambeth, S. P., Schapiro, S. J., Bernacky, B. J. et al. 2013. Establishing 'quality of life' parameters using behavioural guidelines for humane euthanasia of captive non-human primates. Animal Welfare 22(4) 429-435.

Chronic pain and distress are universally accepted conditions that may adversely affect an animal’s quality of life (QOL) and lead to the humane euthanasia of an animal. At most research institutions and zoological parks in...

Hrapkiewicz, K., Colby, L. A., Denison, P. 2013. Clinical Laboratory Animal Medicine: An Introduction (4th Ed). Wiley-Blackwell, Ames, IA.

Clinical Laboratory Animal Medicine: An Introduction, Fourth Edition offers a user-friendly guide to the unique anatomy and physiology, care, common diseases, and treatment of small mammals and nonhuman primates. Carefully designed for ease of use...

Rault, J.-L. 2012. Friends with benefits: Social support and its relevance for farm animal welfare. Applied Animal Behaviour Science 136(1), 1-14.

Despite growing interest in promoting positive welfare, rather than just alleviating poor welfare, potential measures of good welfare, and means to provide it, have remained elusive. In humans social support improves stress-coping abilities, health, and...

Walters, S. L., Torres-Urbano, C. J., Chichester, L. et al. 2012. The impact of huts on physiological stress: A refinement in post-transport housing of male guinea pigs (Cavia porcellus). Laboratory Animals 46(3), 220-224.

The ideal animal model would contribute no confounding variables in experimental science. Variables affect experimental design resulting in increased animal use or repeated studies. We demonstrated a simple refinement which may reduce the number of...

Camacho, J. N., Boskovic, S., Moeller, E. 2012. Improved nonhuman primate social housing using visual cues associated for an intensive research study. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 636-637 (Abstract #PS35).

Lean management-based visual tools have been used to improve the quality of animal care associated with a complex research study involving immune-compromised cynomolgus monkeys (M. fascicularis) in various postsurgical recovery states. In order to effectively...

Martin, A. L., Bloomsmith, M. A., Perlman, J. E. 2011. An assessment program to monitor behavior and evaluate treatment of behavioral problems. American Journal of Primatology 73(S1), 85. (34th Meeting of the American Society of Primatologists Scientific Program, Abstract #159)

At the Yerkes National Primate Center we have developed a system for behavioral assessment that includes these elements: frequent observation of behavior for all primates with a check sheet-type record; a quantitative system for recording...

Huber, H. F., Lewis, K. P. 2011. An assessment of gum-based environmental enrichment for captive gummivorous primates. Zoo Biology 30(1), 71-78.

In the wild, many primates consume gums exuded from trees, and many species are gum specialists. In spite of this, few data exist concerning gum feeding in captivity. Using a web-based survey of 46 zoos...

Egeler, J. L., Hoekwater, S., Hoffman, H. D. 2010. Monitoring program for the treatment of nonhuman primates with behavioral disorders. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 717 (Abstract #P113).

Maintaining the psychologic wellbeing of nonhuman primates housed in a laboratory setting is an important aspect in providing the best possible care for these animals. Nonhuman primates kept in captivity can begin to display abnormal...

Harkness, J. E., Turner, P. V., Vande Woude, S. et al. 2010. Biology and Medicine of Rabbits and Rodents (5th Ed.). Wiley-Blackwell, Ames, Iowa.

The Biology and Medicine of Rabbits and Rodents provides concise, up - to - date, reasonably comprehensive information to anyone concerned with the health, care, and management of rabbits and rodents. The book is intended...

Branson, E. J. (Ed.) 2008. Fish Welfare. Blackwell Publishing Ltd: Oxford, UK, 300 p.

Fish have the same stress response and powers of nociception as mammals. Their behavioural responses to a variety of situations suggest a considerable ability for higher level neural processing – a level of consciousness equivalent...

Crast, J. 2007. Socially-mediated learning in groups of primates: models and methods. American Journal of Primatology 69(S1), 74. (30th Meeting of the American Society of Primatologists Scientific Program, Abstract #90)

An ethological understanding of a behavioral phenomenon incorporates four levels of explanation: development, mechanism, function, and evolution. The phenomenon of socially-mediated learning has garnered a great deal of attention from ethologists, prominently including primatologists. Gregarious...

Conour, L. A., Murray, K. A., Brown, M. J. 2006. Preparation of animals for research -- Issues to consider for rodents and rabbits. ILAR Journal 47(4), 283-293.

This article provides details to consider when preparing to use animals in biomedical research. The stress of transport and receipt of animals into a new environment mandate the need for a period of stabilization and...

Huntingford, F. A., Adams, C., Braithwaite, V. A. et al. 2006. Current issues in fish welfare. Journal of Fish Biology 68(2), 332-372.

In common with all vertebrates, fish respond to environmental challenges with a series of adaptive neuro‐endocrine adjustments that are collectively termed the stress response. These in turn induce reversible metabolic and behavioural changes that make...

Hutchinson, E., Avery, A., Van de Woude, S. 2005. Environmental enrichment for laboratory rodents. ILAR Journal 46(2), 148-161.

In this article, laws and guidelines relating to rodent enrichment are reviewed, the natural behaviors of select rodent species are discussed, and an overview of widely used types of enrichment in laboratory rodent management is...

National Research Council. 2003. Guidelines for the Care and Use of Mammals in Neuroscience and Behavioral Research. National Academic Press: Washington, DC, 223 pp.

Expanding on the National Research Council’s Guide for the Care and Use of Laboratory Animals, this book deals specifically with mammals in neuroscience and behavioral research laboratories. It offers flexible guidelines for the care of...

Bassett, L., Buchanan-Smith, H. M., McKinley, J. et al. 2003. Effects of training on stress-related behavior of the common marmost (Callithrix jacchus) in relation to coping with routine husbandry procedures. Journal of Applied Animal Welfare Science 6(3), 221-233.

Using positive reinforcement, J. McKinley trained 12 common marmosets (Callithrix jacchus) to provide urine samples on request. The study then exposed the marmosets to mildly stressful, routine husbandry procedures (i.e., capture and weighing). The nonhuman...