Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Ciborowska, P., Michalczuk, M., Bień, D. 2021. The effect of music on livestock: Cattle, poultry and pigs. Animals 11(12), 3572.

The welfare of animals, especially those kept in intensive production systems, is a priority for modern agriculture. This stems from the desire to keep animals healthy, to obtain a good-quality final product, and to meet...

Leach, K. A., Charlton, G. L., Green, M. J. et al. 2021. Bedding system influences lying behaviour in dairy cows. Veterinary Record 190(7), e1066.

Background: The nature and depth of bedding material have an important influence on cow lying behaviour and comfort. Increasing use of recycled manure solids (RMS) as bedding led to an investigation of the influence of...

Costantino, A., Fabrizio, E., Calvet, S. 2021. The role of climate control in monogastric animal farming: The effects on animal welfare, air emissions, productivity, health, and energy use. Applied Sciences 11(20), 9549.

In the last decades, an engineering process has deeply transformed livestock houses by introducing fine-tuned climate control systems to guarantee adequate indoor climate conditions needed to express the maximum genetic potential of animals and to...

Laméris, D. W., Verspeek, J., Depoortere, A. et al. 2021. Effects of enclosure and environmental enrichment on the behaviour of ring-tailed lemurs (Lemur catta). Journal of Zoological and Botanical Gardens 2(2), 164–173.

Environmental enrichment is widely used to improve the quality of life of animals under human care. To successfully implement enrichment programs, it is important to evaluate their effect in different enclosure types since housing conditions...

Waterman, J. O., McNally, R., Harrold, D. et al. 2021. Evaluating environmental enrichment methods in three zoo-housed varanidae lizard species. Journal of Zoological and Botanical Gardens 2(4), 716–727.

Environmental enrichment has been shown to enhance the behavioural repertoire and reduce the occurrence of abnormal behaviours, particularly in zoo-housed mammals. However, evidence of its effectiveness in reptiles is lacking. Previously, it was believed that...

Melfi, V. A., Dorey, N. R., Ward, S. (Eds.) 2020. Zoo Animal Learning and Training. John Wiley & Sons: Hoboken, NJ, 384 pp.

Comprehensively explains animal learning theories and current best practices in animal training within zoos. This accessible, up-to-date book on animal training in a zoo/aquaria context provides a unified approach to zoo animal learning, bringing together...

Paredes, E., Costas, D. 2020. Non-lethal sex identification of sea urchins: Method and advantages. Lab Animal 49(1), 7–8.

A simple method for sex determination can reduce the number of sea urchins used in the lab and help to optimize experimental design. Our new methodology developed with Paracentrotus lividus is simple and inexpensive, requiring...

Kawamura, G., Yong, A. S. K., Roy, D. C. et al. 2020. Shelter colour preference in the purple mud crab Scylla tranquebarica (Fabricius). Applied Animal Behaviour Science 225, 104966.

Cannibalism a serious problem in the grow-out of mud crabs in ponds. Studies have proven that presence of shelters decreases aggressive behaviour of Scylla spp. in ponds and tanks. In this study, the shelter colour...

Palczynski, L., Bleach, E., Brennan, M. et al. 2020. Appropriate dairy calf feeding from birth to weaning: “It’s an investment for the future”. Animals 10(1), 116.

Dairy calves must be fed appropriately to meet their nutritional needs, supporting optimal growth and development to achieve the recommended target age at first calving (AFC) of 24 months. Traditional restricted milk feeding practices suppress...

Guo, Y., He, D., Chai, L. 2020. A machine vision-based method for monitoring scene-interactive behaviors of dairy calf. Animals 10(2), 190.

Requirements for animal and dairy products are increasing gradually in emerging economic bodies. However, it is critical and challenging to maintain the health and welfare of the increasing population of dairy cattle, especially the dairy...

Lowe, G., McCane, B., Sutherland, M. et al. 2020. Automated collection and analysis of infrared thermograms for measuring eye and cheek temperatures in calves. Animals 10(2), 292.

As the reliance upon automated systems in the livestock industry increases, technologies need to be developed which can be incorporated into these systems to monitor animal health and welfare. Infrared thermography (IRT) is one such...

Li, C., Wang, J., Jin, S. et al. 2020. Artificial grooming during early life could boost the activity and human affinity of Holstein female calves. Animals 10(2), 302.

Early cow–calf separation management induced various welfare problems for dairy calves. We mimicked the maternal licking by manually brushing right after the Holstein female calves were born and during their first week of life, termed...

Espinoza, C., Lomax, S., Windsor, P. 2020. The effect of topical anaesthesia on the cortisol responses of calves undergoing dehorning. Animals 10(2), 312.

Dehorning causes pain and distress to cattle, and there is a need to provide effective and practical analgesia to improve animal welfare. We conducted an experiment to determine the effect of a modified post-operative topical...

Ferreira Ponciano Ferraz, P., Araújo e Silva Ferraz, G., Leso, L. et al. 2020. Evaluation of the physical properties of bedding materials for dairy cattle using fuzzy clustering analysis. Animals 10(2), 351.

The bedding materials used in dairy cow housing systems are extremely important for animal welfare and performance. A wide range of materials can be used as bedding for dairy cattle, but their physical properties must...

Moncada, A. C., Neave, H. W., von Keyserlingk, M. A. G. et al. 2020. Use of a mechanical brush by dairy cows with chorioptic mange. Applied Animal Behaviour Science 223, 104925.

Mechanical brushes allow cows to groom. Mange is common in indoor-housed cattle, and this affliction may affect cow motivation to use a mechanical brush. The aim of this study was to assess changes in dairy...

Schütz, K. E., Huddart, F. J., Cave, V. M. 2020. Do dairy cattle use a woodchip bedded area to rest on when managed on pasture in summer? Applied Animal Behaviour Science 223, 104922.

Previous studies have demonstrated that dairy cattle prefer pasture over indoor conditions especially at nighttime, which suggests they perceive pasture as an attractive place to rest. Indeed, cows avoid and spend less time lying on...

Amorim Franchi, G., Herskin, M. S., Bak Jensen, M. 2020. Do dietary and milking frequency changes during a gradual dry-off affect feed-related attention bias and visual lateralisation in dairy cows? Applied Animal Behaviour Science 223, 104923.

A widespread management practice in commercial dairy farms is to stop milk production artificially commonly 2 months before expected calving, in a process termed drying-off. Dry-off management normally encompasses dietary changes as well as abrupt...

Valadez-Noriega, M., Méndez-Gómez-Humarán, M. C., Rayas-Amor, A. A. et al. 2020. Effects of greenhouse roofs on thermal comfort, behavior, health, and finishing performance of commercial zebu steers in cold arid environments. Journal of Veterinary Behavior 35, 54-61.

The aim of this study was to determine the effects of two housing systems (thermal plastic greenhouse roofs—PGR—vs. without roof—PWR) on health, welfare, and finishing performance of zebu steers in cold arid environments. A total...

Hyde, R. M., Down, P. M., Bradley, A. J. et al. 2020. Automated prediction of mastitis infection patterns in dairy herds using machine learning. Scientific Reports 10(1), 4289.

Mastitis in dairy cattle is extremely costly both in economic and welfare terms and is one of the most significant drivers of antimicrobial usage in dairy cattle. A critical step in the prevention of mastitis...

Harvey, A., Beausoleil, N., Ramp, D. et al. 2020. A ten-stage protocol for assessing the welfare of individual non-captive wild animals: Free-roaming horses (Equus ferus caballus) as an example. Animals 10(1), 148.

Knowledge of the welfare status of wild animals is vital for informing debates about the ways in which we interact with wild animals and their habitats. Currently, there is no published information about how to...

Leeds, A., Good, J., Schook, M. W. et al. 2020. Evaluating changes in salivary oxytocin and cortisol following positive reinforcement training in two adult male western lowland gorillas (Gorilla gorilla gorilla). Zoo Biology 39(1), 51-55.

Positive reinforcement training (PRT) is associated with increases in species-typical behavior and decreases in stereotypic and abnormal behavior in participating animals. Physiological changes following PRT, for example, increases in oxytocin (OXT) and/or decreases in cortisol...

Figueiredo, F., Aragão, C., Pinto, W. et al. 2020. Optimizing rearing and welfare in Senegalese sole (Solea senegalesensis) broodstock: Effect of ambient light intensity and handling time on stress response. Applied Animal Behaviour Science 222, 104880.

Broodstock rearing conditions and handling procedures should be optimized in aquaculture species in order to benefit fish welfare and guarantee optimal conditions for spawning. In teleosts, basal cortisol levels display daily rhythms, oscillating along the...

da Silva, A., Lima, M. R., Meletti, P. C. et al. 2020. Impact of environmental enrichment and social group size in the aggressiveness and foraging activity of Serrapinnus notomelas. Applied Animal Behaviour Science 224, 104943.

Fish are widely used in scientific research, and many species are bred for ornamental purposes and human consumption. Despite the large number of fish kept in captivity, research on the welfare of these animals has...

Hubert, J., Neo, Y. Y., Winter, H. V. et al. 2020. The role of ambient sound levels, signal-to-noise ratio, and stimulus pulse rate on behavioural disturbance of seabass in a net pen. Behavioural Processes 170, 103992.

Anthropogenic sources increasingly contribute to the underwater soundscape and this may negatively impact aquatic life, including fish. Anthropogenic sound may mask relevant sound, alter behaviour, physiology, and may lead to physical injury. Behavioural effect studies...

Latham, A., Davidson, B., Warburton, B. et al 2020. Efficacy and animal welfare impacts of novel capture methods for two species of invasive wild mammals in New Zealand. Animals 10(1), 44.

All capture methods impose animal welfare impacts, but these impacts are rarely quantified or reported. We present data from two wildlife capture studies that trialled new methods for capturing Bennett’s wallabies (Notamacropus rufogriseus) and red...