Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Hoglund, E., Calabrese, S., Jonassen, T. M. et al. 2024. Does sedation with AQUI-S mitigate transport stress and post transport mortality in ballan wrasse (Labrus bergyltae)? Frontiers in Veterinary Science 11.

Ballan wrasse (Labrus bergylta) are commonly used as cleaner fish in salmon farms as a biological treatment to mitigate sea lice infestation. Improved welfare for cleaner fish both during production of these fish and when...

Golledge, H., Richardson, C. (Eds.) 2024. The UFAW Handbook on the Care and Management of Laboratory and Other Research Animals (9th ed.). Wiley-Blackwell. 1040 p.

The latest edition of the seminal reference on the care and management of laboratory and research animals. The newly revised ninth edition of The UFAW Handbook on the Care and Management of Laboratory and Other...

Kaleel, K. L., Secoura, P. L., Muñoz-Pérez, J. P. et al. 2024. Endoscopy and rectal enema for fecal collection in wild sea turtles (Chelonia mydas, Eretmochelys imbricata) in a field setting. Zoo Biology 43(1), 55–60.

Forty-seven free-ranging sea turtles (46- Chelonia mydas, 1- Eretmochelys imbricata) were examined via novel use of an endoscopy combined with a rectal enema to obtain large fecal sample volumes. The cloaca was insufflated using an...

Padalino, B., Benedetti, B., Felici, M. et al. 2023. GLAD scale for ranking welfare of horses on arrival after transport to slaughterhouses. Animals 13(9), 1465.

To date, there is no official method for measuring horse welfare after transport. This study aimed to develop a scale to classify horses into four categories: good shape; light affected; affected; down (GLAD) based on...

Jones, M, Alexander, M. E., Lightbody, S. et al. 2023. Influence of social enrichment on transport stress in fish: A behavioural approach. Applied Animal Behaviour Science 262, 105920.

Ornamental fishes are among the most commonly owned companion animals in the world, however, the transportation process during acquisition can result in fishes being exposed to biotic and abiotic conditions which compromise welfare. While many...

Deng, J., Zhang, H., Wang, Q. et al. 2023. An optimized environmental DNA method to improve detectability of the endangered Sichuan taimen (Hucho bleekeri). Fishes 8(7), 339.

Environmental DNA (eDNA) techniques have emerged as a cost-effective and non-invasive strategy for monitoring the distribution of endangered aquatic species. Despite their numerous advantages, operational uncertainty at each step of the process represents a significant...

Bortoletti, M., Fonsatti, E., Leva, F. et al. 2023. Influence of transportation on stress response and cellular oxidative stress markers in juvenile meagre (Argyrosomus regius). Animals 13(20), 3288.

In aquaculture, the transportation of live fish is a crucial but stress-inducing practice, necessitating a thorough understanding of its impact on fish welfare. This study aimed to assess the physiological stress response of meagre (Argyrosomus...

Escribano, D., Contreras-Jodar, A., López-Arjona, M. et al. 2023. Changes in cortisol and cortisone in hair of pigs reared under heat stress conditions. Frontiers in Veterinary Science 10.

Heat stress accounts for millions of dollars in losses for swine producers worldwide. The aim of the present study was to determine and evaluate cortisol and cortisone in hair as indicators of thermal stress in...

Gui, F., Sun, H., Qu, X. et al. 2023. Temperature and dissolved oxygen lead to behavior and respiration changes in juvenile largemouth bass (Micropterus salmoides) during transport. Fishes 8(12), 565.

The study aimed to investigate the effects of temperature and dissolved oxygen on juvenile largemouth bass during transportation. The experiment involved four temperature groups: 20, 15, 10, and 5 °C. We analyzed the effects of...

Ortín-Bustillo, A., Botía, M., López-Arjona, M. et al. 2023. Saliva sampling material matters: Effects on the results of saliva analysis in pigs. Animals 13(24), 3757.

The use of saliva as a biological sample from pigs is of high practical interest because blood collection from pigs is difficult and stressful. In this study, the influence of two different materials, a cotton...

Alizadeh, E. A., Graf, K., Schiwon, J. et al. 2023. Thirty years of telemetry-based data acquisition for cardiovascular drug safety evaluation: Applications and optimization. Journal of Pharmacological and Toxicological Methods 122, 107279.

Conducting safety evaluations of new drugs using conscious animals has been a specialty of our working group for thirty years. In this article, we review the various technical challenges and solutions dealt with over the...

Crone, C., Caldara, F. R., Martins, R. et al. 2023. Environmental enrichment for pig welfare during transport. Journal of Applied Animal Welfare Science 26(3), 393–403.

This study aimed to assess the effects of environmental enrichment for pigs during transportation in different phases of their productive cycle. Two trials were conducted, the first during transportation of pigs from the piglet production...

Kim, J., Lee, J., Kang, K. et al. 2023. Effects of sling belt provision on behaviour, skin lesions, and salivary cortisol level in growing pigs after transport and regrouping. Applied Animal Behaviour Science 269, 106116.

The provision of enrichment material has been widely recommended to mitigate stress and minimise aggressive behaviour as well as enhance the welfare of pigs after transport and regrouping. In this study, we assessed the effects...

Lelláková, M., Pavľak, A., Lešková, L. et al. 2023. Monitoring blinks and eyelid twitches in horses to assess stress during the samples collection process. Journal of Applied Animal Welfare Science 26(4), 530–539.

To assess stress in horses, a method of monitoring eye blinks (full and half) and eyelid twitches while collecting saliva and blood samples before and after annual intensive police training was carried out. This noninvasive...

Zeltner, A., Cristofferson, C. 2022. Taking blood from a Göttingen minipig while placed in a sling. Animal Technology and Welfare 21(1), 58-61.

Traditionally Göttingen minipigs are restrained in dorsal recumbency to have access to the blood vessels in the neck. Minipigs, like any other animal do not particularly like to be restrained and being turned on their...

Boardman, R. M., Pinder, A. C., Piper,A. T. et al. 2022. Non-lethal sampling for the stable isotope analysis of the critically endangered European eel Anguilla anguilla: How fin and mucus compare to dorsal muscle. Journal of Fish Biology 100(3), 847-851.

Ecological studies on the critically endangered European eel Anguilla anguilla often incorporate stable isotope analysis that typically uses dorsal muscle sampled from euthanised eels. To minimise the lethal sampling of imperilled populations, fin tissue and/or...

Tonachella, N., Martini, A., Martinoli, M. et al. 2022. An affordable and easy-to-use tool for automatic fish length and weight estimation in mariculture. Scientific Reports 12(1), 15642.

Common aquaculture practices involve measuring fish biometrics at different growth stages, which is crucial for feeding regime management and for improving farmed fish welfare. Fish measurements are usually carried out manually on individual fish. However...

Mason, G. J., Lavery, J. M. 2022. What is it like to be a bass? Red herrings, fish pain and the study of animal sentience. Frontiers in Veterinary Science 9, 788289.

Debates around fishes’ ability to feel pain concern sentience: do reactions to tissue damage indicate evaluative consciousness (conscious affect), or mere nociception? Thanks to Braithwaite’s research leadership, and concerns that current practices could compromise welfare...

O’Malley, C. I., Hubley, R., Tambadou, H. et al. 2022. Refining restraint techniques for research pigs through habituation. Frontiers in Veterinary Science 9, 1016414.

Pigs are common research models and are strong animals that can be difficult to restrain. Improper restraint can put pigs and research personnel at risk for injury and induce stress, which can affect research outcomes...

Riva, M. G., Sobrero, L., Menchetti, L. et al. 2022. Unhandled horses classified with broken/unbroken test (BUT) exhibit longer avoidance, flight reactions, and displacement behaviors when approached by humans. Frontiers in Veterinary Science 9, 1022255.

Horses with a low level of tameness are at higher risk for transport-related disease and injury; hence, European regulations for the protection of animals during transport (EC 1/2005) are stricter for unhandled (unbroken) horses. However...

Santymire, R. M., Young, M., Lenihan, E. et al. 2022. Preliminary investigation into developing the use of swabs for skin cortisol analysis for the ocean sunfish (Mola mola). Animals 12(20), 2868.

The ocean sunfish (mola; Mola mola) is the heaviest bony fish in the world. This slow-moving fish often is injured by fishing boats that use drift gillnets attributing to its listing as Vulnerable by the...

Wang, M., Youssef, Al., Larsen, M. et al. 2021. Contactless video-based heart rate monitoring of a resting and an anesthetized pig. Animals 11(2), 442.

Heart rate (HR) is a vital bio-signal that is relatively easy to monitor with contact sensors and is related to a living organism’s state of health, stress and well-being. The objective of this study was...

Ramos, J., Balasch, J. C., Tort, L. 2021. About welfare and stress in the early stages of fish. Frontiers in Veterinary Science 8, 634434.

In conclusion, the investigations carried out up to now demonstrate that during the early stages fish show high sensitivity to many types of stressors involving an array of responses to overcome alterations that could affect...

Wiechers, D.-H., Brunner, S., Herbrandt, S. et al. 2021. Analysis of hair cortisol as an indicator of chronic stress in pigs in two different farrowing systems. Frontiers in Veterinary Science 8, 605078.

Confinement to farrowing crates is known to prevent sows from performing natural behavior, impairing animal welfare and possibly causing chronic stress. Hair cortisol analyses are increasingly used to detect chronic stress in animals. In the...

Prior, H., Holbrook, M. 2021. Strategies to encourage the adoption of social housing during cardiovascular telemetry recordings in non-rodents. Journal of Pharmacological and Toxicological Methods 108, 106959.

The National Centre for the Replacement, Refinement and Reduction of Animals in Research (NC3Rs) is working with industry to promote social housing during cardiovascular telemetry recordings within non-rodent safety pharmacology and toxicology studies. Following surveys...