Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Kruger, M. C., Morel, P. C. H. 2016. Experimental control for the ovariectomized rat model: Use of sham versus nonmanipulated animal. Journal of Applied Animal Welfare Science 19(1), 73-80.

One of 2 models required by the U.S. Food and Drug Administration for registration of a treatment for osteoporosis, the ovariectomized (OVX) rat model, is widely used in scientific studies investigating sex hormone-deficient bone loss...

Lidster, K., Jefferys, J. G., Blümcke, I. et al. 2016. Opportunities for improving animal welfare in rodent models of epilepsy and seizures. Journal of Neuroscience Methods 260, 2-25.

Animal models of epilepsy and seizures, mostly involving mice and rats, are used to understand the pathophysiology of the different forms of epilepsy and their comorbidities, to identify biomarkers, and to discover new antiepileptic drugs...

Lidster, K., Jefferys, J. G., Blümcke, I. et al. 2016. Opportunities for improving animal welfare in rodent models of epilepsy and seizures. Journal of Neuroscience Methods 260, 2-25.

Animal models of epilepsy and seizures, mostly involving mice and rats, are used to understand the pathophysiology of the different forms of epilepsy and their comorbidities, to identify biomarkers, and to discover new antiepileptic drugs...

Manuel, R., Gorissen, M., Stokkermans, M. et al. 2015. The effects of environmental enrichment and age-related differences on inhibitory avoidance in Zebrafish (Danio rerio). Zebrafish 12(2), 152-165.

The inhibitory avoidance paradigm allows the study of mechanisms underlying learning and memory formation in zebrafish (Danio rerio Hamilton). For zebrafish, the physiology and behavior associated with this paradigm are as yet poorly understood. We...

Heyse, N. C., Brenes, J. C., Schwarting, R. K. W. 2015. Exercise reward induces appetitive 50-kHz calls in rats. Physiology & Behavior 147, 131-140.

Rats express affective states by visible behaviors (like approach or flight) and through different kinds of ultrasonic vocalizations (USV). 50-kHz calls are thought to reflect positive affective states since they occur during rewarding situations like...

Brown, C. 2015. Fish intelligence, sentience and ethics. Animal Cognition 18(1), 1-17.

Fish are one of the most highly utilised vertebrate taxa by humans; they are harvested from wild stocks as part of global fishing industries, grown under intensive aquaculture conditions, are the most common pet and...

Hawkins, P., Armstrong, R., Boden, T. et al. 2015. Applying refinement to the use of mice and rats in rheumatoid arthritis research. Inflammopharmacology 23, 131–150.

Rheumatoid arthritis (RA) is a painful, chronic disorder and there is currently an unmet need for effective therapies that will benefit a wide range of patients. The research and development process for therapies and treatments...

Bethell, E. J., Koyama, N. F. 2015. Happy hamsters? Enrichment induces positive judgement bias for mildly (but not truly) ambiguous cues to reward and punishment in Mesocricetus auratus. Royal Society Open Science 2, 140399.

Recent developments in the study of animal cognition and emotion have resulted in the ‘judgement bias’ model of animal welfare. Judgement biases describe the way in which changes in affective state are characterized by changes...

Brown, C. 2015. Fish intelligence, sentience and ethics. Animal Cognition 18(1), 1–17.

Fish are one of the most highly utilised vertebrate taxa by humans; they are harvested from wild stocks as part of global fishing industries, grown under intensive aquaculture conditions, are the most common pet and...

Sneddon, L. U., Elwood, R. W., Adamo, S. A. et al. 2014. Defining and assessing animal pain. Animal Behaviour 97, 201-212.

The detection and assessment of pain in animals is crucial to improving their welfare in a variety of contexts in which humans are ethically or legally bound to do so. Thus clear standards to judge...

Bartal, I. B.-A., Rodgers, D. A., Sarria, M. S. et al. 2014. Pro-social behavior in rats is modulated by social experience. eLife 3, e01385.

In mammals, helping is preferentially provided to members of one’s own group. Yet, it remains unclear how social experience shapes pro-social motivation. We found that rats helped trapped strangers by releasing them from a restrainer...

Speer, B. 2014. Normal and abnormal parrot behavior. Journal of Exotic Pet Medicine 23(3), 230-233.

Behavior and behavior-associated issues are an important part of psittacine medicine. However, many veterinarians have an approach to parrots from the basics of handling and restraint to their assessment of behavioral issues (e.g., feather plucking)...

Jones, C. E., Riha, P. D., Gore, A. C. et al. 2014. Social transmission of Pavlovian fear: Fear-conditioning by-proxy in related female rats. Animal Cognition 17(3), 827–834.

Pairing a previously neutral conditioned stimulus (CS; e.g., a tone) to an aversive unconditioned stimulus (US; e.g., a foot-shock) leads to associative learning such that the tone alone will elicit a conditioned response (e.g., freezing)...

Makowska, I. J., Weary, D. M. 2013. Assessing the emotions of laboratory rats. Applied Animal Behaviour Science 148, 1-12.

Rats are one of the most commonly used species in research, and decades of testing have yielded a large amount of information pertaining to their experience of emotion. The aim of this review is to...

Reinhardt, V. (ed.) 2013. Compassion Makes a Difference - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume III. Animal Welfare Institute, Washington, DC.

This is the third volume of discussions that took place on the Laboratory Animal Refinement & Enrichment Forum (LAREF). This forum is dedicated to the exchange of personal experiences of refining the conditions under which...

Wolfensohn, S., Hawkins, P., Lilley, E. et al. 2013. Reducing suffering in experimental autoimmune encephalomyelitis (EAE). Journal of Pharmacological and Toxicological Methods 67(3), 169-176.

This report is based on discussions and submissions from an expert working group consisting of veterinarians, animal care staff and scientists with expert knowledge relevant to the field. It aims to facilitate the implementation of...

Wolfensohn, S., Hawkins, P., Lilley, E. et al. 2013. Reducing suffering in animal models and procedures involving seizures, convulsions and epilepsy. Journal of Pharmacological and Toxicological Methods 67(1), 9-15.

This report is based on discussions and submissions from an expert working group consisting of veterinarians, animal care staff and scientists with expert knowledge relevant to the field and aims to facilitate the implementation of...

Perlman, J. E., Bloomsmith, M. A., Whittaker, M. A. et al. 2012. Implementing positive reinforcement animal training programs at primate laboratories. Applied Animal Behaviour Science 137(3-4), 114-126.

In the last decade several surveys of primate care and training programs highlight a common theme; despite scientific evidence that animal training can be effective in reducing stress, increasing efficiency and improving veterinary care, animal...

Gillis, T. E., Janes, A. C., Kaufman, M. J. 2012. Positive reinforcement training in squirrel monkeys using clicker training. American Journal of Primatology 74(8), 712-720.

Nonhuman primates in research environments experience regular stressors that have the potential to alter physiology and brain function, which in turn can confound some types of research studies. Operant conditioning techniques such as positive reinforcement...

Severs, E., Leszcynski, J. 2012. Training rats to shift into clean cages by using operant conditioning with positive reinforcement. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 632-633 (Abstract #PS8).

Changing soiled cages is an integral part of husbandry, yet it can be a source of stress for both animal and animal care technician. In one case, large geriatric rats weighing around 1 kg did...

Coleman, K. 2012. Individual differences in temperament and behavioral management practices for nonhuman primates. Applied Animal Behaviour Science 137(3-4), 106-113.

This review will examine how individual differences in temperament might affect, or be affected by, behavioral management practices for captive primates. Measuring temperament may help us predict the outcome of social introductions. It can also...

Rogge, J. R., Sherenco, K. D., Malling, R. et al. 2011. Establishing a positive reinforcement training program in neotropical primates: A comparison of squirrel and owl monkeys. American Journal of Primatology 73(S1), 84. (34th Meeting of the American Society of Primatologists Scientific Program, Abstract #157)

To enhance the psychological well-being of non-human primates, many biomedical facilities use positivereinforcement training (PRT) techniques to encourage voluntary participation in husbandry and clinical procedures.PRT increases the animal?s control over its environment and desensitizes the...

Gewin, V. 2011. Rats free each other from cages. Nature News.

Following a two-week introduction period, pairs of rats were put inside an arena. One was trapped inside a central restrainer, while the other roamed free in the larger space. By day six or seven, on...

Brydges, N. M., Leach, M., Nicol, K. et al. 2011. Environmental enrichment induces optimistic cognitive bias in rats. Animal Behaviour 81(1), 169-175.

People's affective or emotional state can alter their cognitive processing, biasing interpretation of ambiguous stimuli. Those in a more positive state interpret such stimuli in a more optimistic manner than those in a negative state...

Watts, A. 2010. Thinking outside the box in box training. Tech Talk [The Newsletter for Laboratory Animal Science Technicians] 15(2), 3.

At the Oregon National Primate Research Center, we train animals to enter transfer boxes using positive reinforcement training (PRT), a type of training in which the trainer reinforces desired behaviors (such asentering the transfer box)...