Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Thomas, A. D., Orsel, K., Cortés, J. A. et al. 2021. Impact of digital dermatitis on feedlot cattle behaviour. Applied Animal Behaviour Science 244, 105468.

Digital dermatitis (DD) is an infectious disease affecting the bovine digital skin which can cause lameness and significantly affect animal welfare and economics. Digital dermatitis has emerged in feedlots and early identification of DD lesions...

Falendysz, E. A., Calhoun, D. M., Smith, C. A. et al. 2020. Outside the box: Working with wildlife in biocontainment. ILAR Journal 61(1), 72-85.

Research with captive wildlife in Animal Biosafety Level 2 (ABSL2) and 3 (ABSL3) facilities is becoming increasingly necessary as emerging and re-emerging diseases involving wildlife have increasing impacts on human, animal, and environmental health. Utilizing...

Tatemoto, P., Serra, M. 2021. Low luminosity reduces agonistic behaviour of Nile tilapia. Journal of Applied Animal Welfare Science 24(4), 434-441.

In confrontations, many behaviors are based on visual information. To establish the importance of visual signals in the aggression of cichlid fish, we observed the behavior of groups in three juveniles of Nile tilapia (six...

Thatcher, D. 2021. The use of a borescope for Goodfellow’s tree kangaroo (Dendrolagus goodfellowi) husbandry. RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 48(2), 10-11.

In 2017 Bristol Zoological Gardens received two Goodfellow tree kangaroos. As this was a new marsupial species for the collection, keepers attended the European Symposium on tree kangaroos to better improve our husbandry, knowledge and...

Brox, B. W., Edwards, K., Buist, N. A. et al. 2021. Investigating food preference in zoo-housed meerkats. Zoo Biology 40(6), 517-526.

Understanding food preference among animals in human care can support improvements to welfare through training and day-to-day care (e.g., diet management). Little has been published about food preference in zoo-housed meerkats. Assessing meerkat food preference...

Leach, K. A., Charlton, G. L., Green, M. J. et al. 2021. Bedding system influences lying behaviour in dairy cows. Veterinary Record 190(7), e1066.

Background: The nature and depth of bedding material have an important influence on cow lying behaviour and comfort. Increasing use of recycled manure solids (RMS) as bedding led to an investigation of the influence of...

Costantino, A., Fabrizio, E., Calvet, S. 2021. The role of climate control in monogastric animal farming: The effects on animal welfare, air emissions, productivity, health, and energy use. Applied Sciences 11(20), 9549.

In the last decades, an engineering process has deeply transformed livestock houses by introducing fine-tuned climate control systems to guarantee adequate indoor climate conditions needed to express the maximum genetic potential of animals and to...

Palczynski, L., Bleach, E., Brennan, M. et al. 2020. Appropriate dairy calf feeding from birth to weaning: “It’s an investment for the future”. Animals 10(1), 116.

Dairy calves must be fed appropriately to meet their nutritional needs, supporting optimal growth and development to achieve the recommended target age at first calving (AFC) of 24 months. Traditional restricted milk feeding practices suppress...

Ferreira Ponciano Ferraz, P., Araújo e Silva Ferraz, G., Leso, L. et al. 2020. Evaluation of the physical properties of bedding materials for dairy cattle using fuzzy clustering analysis. Animals 10(2), 351.

The bedding materials used in dairy cow housing systems are extremely important for animal welfare and performance. A wide range of materials can be used as bedding for dairy cattle, but their physical properties must...

Moncada, A. C., Neave, H. W., von Keyserlingk, M. A. G. et al. 2020. Use of a mechanical brush by dairy cows with chorioptic mange. Applied Animal Behaviour Science 223, 104925.

Mechanical brushes allow cows to groom. Mange is common in indoor-housed cattle, and this affliction may affect cow motivation to use a mechanical brush. The aim of this study was to assess changes in dairy...

Schütz, K. E., Huddart, F. J., Cave, V. M. 2020. Do dairy cattle use a woodchip bedded area to rest on when managed on pasture in summer? Applied Animal Behaviour Science 223, 104922.

Previous studies have demonstrated that dairy cattle prefer pasture over indoor conditions especially at nighttime, which suggests they perceive pasture as an attractive place to rest. Indeed, cows avoid and spend less time lying on...

Amorim Franchi, G., Herskin, M. S., Bak Jensen, M. 2020. Do dietary and milking frequency changes during a gradual dry-off affect feed-related attention bias and visual lateralisation in dairy cows? Applied Animal Behaviour Science 223, 104923.

A widespread management practice in commercial dairy farms is to stop milk production artificially commonly 2 months before expected calving, in a process termed drying-off. Dry-off management normally encompasses dietary changes as well as abrupt...

Valadez-Noriega, M., Méndez-Gómez-Humarán, M. C., Rayas-Amor, A. A. et al. 2020. Effects of greenhouse roofs on thermal comfort, behavior, health, and finishing performance of commercial zebu steers in cold arid environments. Journal of Veterinary Behavior 35, 54-61.

The aim of this study was to determine the effects of two housing systems (thermal plastic greenhouse roofs—PGR—vs. without roof—PWR) on health, welfare, and finishing performance of zebu steers in cold arid environments. A total...

Angiulli, E., Pagliara, V., Cioni, C. et al. 2020. Increase in environmental temperature affects exploratory behaviour, anxiety and social preference in Danio rerio. Scientific Reports 10(1), 5385.

The aim of this work is to investigate the effect of a temperature increase on the behaviour of adult zebrafish (Danio rerio) maintained for 21 days at 34 °C (treatment) and 26 °C (control). The temperatures chosen...

Morrin, Y. 2020. No bullies allowed! Co-operative feeding as a means to enhance the welfare of 'sub-ordinates'. RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 47(1), 18-19.

This article describes a protocol for training capuchins for co-operative feeding. Three months after beginning the training, the two dominant individuals consistently stay stationed, calmly focused, and the keeper is able to hand the subordinate...

Figueiredo, F., Aragão, C., Pinto, W. et al. 2020. Optimizing rearing and welfare in Senegalese sole (Solea senegalesensis) broodstock: Effect of ambient light intensity and handling time on stress response. Applied Animal Behaviour Science 222, 104880.

Broodstock rearing conditions and handling procedures should be optimized in aquaculture species in order to benefit fish welfare and guarantee optimal conditions for spawning. In teleosts, basal cortisol levels display daily rhythms, oscillating along the...

Hubert, J., Neo, Y. Y., Winter, H. V. et al. 2020. The role of ambient sound levels, signal-to-noise ratio, and stimulus pulse rate on behavioural disturbance of seabass in a net pen. Behavioural Processes 170, 103992.

Anthropogenic sources increasingly contribute to the underwater soundscape and this may negatively impact aquatic life, including fish. Anthropogenic sound may mask relevant sound, alter behaviour, physiology, and may lead to physical injury. Behavioural effect studies...

Zemanova, M. A. 2020. Towards more compassionate wildlife research through the 3Rs principles: Moving from invasive to noninvasive methods. Wildlife Biology 2020(1), no page numbers.

Research in ecology and wildlife biology remains crucial for increasing our knowledge and improving species management and conservation in the midst of the current biodiversity crisis. However, obtaining information on population status often involves invasive...

Latham, A., Davidson, B., Warburton, B. et al 2020. Efficacy and animal welfare impacts of novel capture methods for two species of invasive wild mammals in New Zealand. Animals 10(1), 44.

All capture methods impose animal welfare impacts, but these impacts are rarely quantified or reported. We present data from two wildlife capture studies that trialled new methods for capturing Bennett’s wallabies (Notamacropus rufogriseus) and red...

Lovarelli, D., Finzi, A., Mattachini, G. et al. 2020. A survey of dairy cattle behavior in different barns in northern Italy. Animals 10(4), 713.

Due to its increasing pressure on dairy cows, studies that investigate how to cope with heat stress are needed. The heat stress affects multiple aspects of cows’ lives, among which their behavior and welfare. In...

O’Leary, N. W., Byrne, D. T., Garcia, P. et al. 2020. Grazing cow behavior’s association with mild and moderate lameness. Animals 10(4), 661.

Accelerometer-based mobility scoring has focused on cow behaviors such as lying and walking. Accuracy levels as high as 91% have been previously reported. However, there has been limited replication of results. Here, measures previously identified...

Park, R. M., Foster, M., Daigle, C. L. 2020. A scoping review: The impact of housing systems and environmental features on beef cattle welfare. Animals 10(4), 565.

Housing systems and environmental features can influence beef cattle welfare. To date, little information has been synthesized on this topic. The aim of this scoping review was to examine the relationship between housing and welfare...

Lawrence, M. J., Raby, G. D., Teffer, A. K. et al. 2020. Best practices for non-lethal blood sampling of fish via the caudal vasculature. Journal of Fish Biology 97(1), 4–15.

Blood sampling through the caudal vasculature is a widely used technique in fish biology for investigating organismal health and physiology. In live fishes, it can provide a quick, easy and relatively non‐invasive method for obtaining...

Aleström, P., D’Angelo, L., Midtlyng, P. J. et al. 2020. Zebrafish: Housing and husbandry recommendations. Laboratory Animals 54(3), 213–224.

This article provides recommendations for the care of laboratory zebrafish (Danio rerio) as part of the further implementation of Annex A to the European Convention on the protection of vertebrate animals used for experimental and...

Wang, R., Liu, R., Li, L. et al. 2020. Fasting is not required for measuring plasma lipid levels in rabbits. Laboratory Animals 54(3), 272–280.

Plasma lipid and glucose levels are important parameters for evaluating the onset and development of metabolic and cardiovascular diseases. In clinical and experimental studies of humans or mice, fasting is often required before testing plasma...