Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Miller, R. R., Polack, C. W. 2018. Sources of maladaptive behavior in ‘normal’ organisms. Behavioural Processes 154, 4-12.

A basic assumption of most researchers is that behavior is generally functional, and indeed, in most instances the function is obvious. But in a number of cases, some behaviors of neurophysiologically ‘normal’ organisms appear to...

Brando, S., Buchanan-Smith, H. M. 2018. The 24/7 approach to promoting optimal welfare for captive wild animals. Behavioural Processes 156, 83-95.

We have an ethical responsibility to provide captive animals with environments that allow them to experience good welfare. Husbandry activities are often scheduled for the convenience of care staff working within the constraints of the...

Ahloy-Dallaire, J., Espinosa, J., Mason, G. 2018. Play and optimal welfare: Does play indicate the presence of positive affective states? Behavioural Processes 156, 3-15.

Play is commonly used to assess affective states in both humans and non-human animals. Play appears to be most common when animals are well-fed and not under any direct threats to fitness. Could play and...

Freret-Meurer, N. V., Alves, M. A. S. 2018. Personality in the longsnout seahorse, Hippocampus reidi Ginsburg, 1933: Are males shyer than females? Behavioural Processes 157, 106-110.

Individual responses, particularly based on personality, can have important consequences for individual fitness, based upon success in exploring new habitats, feeding on novel foods, and aggressiveness in competitive interactions. We conducted laboratory experiments to analyze...

O’Rourke, D. P., Baccanale, C. L., Stoskopf, M. K. 2018. Nontraditional laboratory animal species (cephalopods, fish, amphibians, reptiles, and birds). ILAR Journal 59(2), 168-176.

Aquatic vertebrates and cephalopods, amphibians, reptiles, and birds offer unique safety and occupational health challenges for laboratory animal personnel. This paper discusses environmental, handling, and zoonotic concerns associated with these species.

Byrd, R., Boyd, S., Buckmaster, C. 2018. Rat thunder jacket— A zen experience. Laboratory Animal Science Professional 6(3) (September), 55-57.

Germ-free rats are fairly uncommon, relative to germ-free mice, and restraining these animals safely and effectively for compound administration and blood collection can be challenging. There are many commercially available varieties of restraint devices, but...

Hawkins, P., McBride, A., Paiba, G. et al. 2018. Report of the 2017 RSPCA/UFAW Rodent and Rabbit Welfare Group meeting. Animal Technology and Welfare 17(2), 75-83. [Meeting Report]

The RSPCA/UFAW Rodent (and now Rabbit) Welfare Group held a one-day meeting on 14 November 2017 in Weybridge, UK. The first session addressed meeting animals' needs and aiming for a 'good life', with the needs...

Teng, K. T.-Y., Devleesschauwer, B., Maertens De Noordhout, C. et al. 2018. Welfare-Adjusted Life Years (WALY): A novel metric of animal welfare that combines the impacts of impaired welfare and abbreviated lifespan. PLOS ONE 13(9), e0202580.

Currently, separate measures are used to estimate the impact of animal diseases on mortality and animal welfare. This article introduces a novel metric, the Welfare-Adjusted Life Year (WALY), to estimate disease impact by combining welfare...

Unakafov, A. M., Möller, S., Kagan, I. et al. 2018. Using imaging photoplethysmography for heart rate estimation in non-human primates. PLOS ONE 13(8), e0202581.

For humans and for non-human primates heart rate is a reliable indicator of an individual’s current physiological state, with applications ranging from health checks to experimental studies of cognitive and emotional state. In humans, changes...

Guesgen, M. J., Bench, C. 2017. What can kinematics tell us about the affective states of animals? Animal Welfare 26( 4), 383-397.

An animal's welfare state is intrinsically linked to its affective state. Evidence suggests that sentient, conscious animals can experience a range of affective states, such as pain, fear or boredom as well as positive affects...

Burn, C. C. 2017. Bestial boredom: a biological perspective on animal boredom and suggestions for its scientific investigation. Animal Behaviour 130, 141-151.

Boredom is likely to have adaptive value in motivating exploration and learning, and many animals may possess the basic neurological mechanisms to support it. Chronic inescapable boredom can be extremely aversive, and understimulation can harm...

Barrows, M. 2017. Welfare assessment in zoo animals. Veterinary Record 181(6), 141-142.

The World Association of Zoos and Aquariums animal welfare strategy encourages zoos to integrate sound animal welfare principles into all activities and recommends assessment based on the Five Domains model of animal welfare. This model...

Justice, W. S. M., O'Brien, M. F., Szyszka, O. et al. 2017. Adaptation of the animal welfare assessment grid (AWAG) for monitoring animal welfare in zoological collections. Veterinary Record 181(6), 143.

Animal welfare monitoring is an essential part of zoo management and a legal requirement in many countries. Historically, a variety of welfare audits have been proposed to assist zoo managers. Unfortunately, there are a number...

Peric, T., Comin, A., Corazzin, M. et al. 2017. Relocation and hair cortisol concentrations in New Zealand White rabbits. Journal of Applied Animal Welfare Science 20(1), 1-8.

To investigate how long relocation modified hair cortisol concentrations in New Zealand white rabbits, 19 rabbits were subjected to a change in their breeding facility at the beginning of the trial and then were kept...

Mellor, D. Operational details of the five domains model and its key applications to the assessment and management of animal welfare. Animals 7(8), 60.

In accord with contemporary animal welfare science understanding, the Five Domains Model has a significant focus on subjective experiences, known as affects, which collectively contribute to an animal’s overall welfare state. Operationally, the focus of...

Okada, M., Miller, T. C., Roediger, J. et al. 2017. An efficient, simple, and noninvasive procedure for genotyping aquatic and nonaquatic laboratory animals. JAALAS 56(5), 570-573.

Various animal models are indispensible in biomedical research. Increasing awareness and regulations have prompted the adaptation of more humane approaches in the use of laboratory animals. With the development of easier and faster methodologies to...

Brenneis, C., Westhof, A., Holschbach, J. et al. 2017. Automated tracking of motion and body weight for objective monitoring of rats in colony housing. JAALAS 56(1), 18-31.

Living together in large social communities within an enriched environment stimulates self-motivated activity in rats. We developed a modular housing system in which a single unit can accommodate as many as 48 rats and contains...

Martin, A. L. 2017. Theprimatologist as a behavioral engineer. American Journal of Primatology 79, e22500.

The field of primate behavior management has had only limited success in preventing and treating abnormal behaviors, such as stereotypy and self‐injury, in captive non‐human primates (NHP). In contrast, applied behavior analysts have had great...

Simpson, D. 2017. Investigation of transportation on rat acclimatisation using novel cage side recording equipment (Rodent Big Brother). Animal Technology and Welfare 16(1), 1-12.

The transportation of animals from supplier to experimental facility is one of the biggest stressors to animals in research. Transportation unavoidably causes stress and when the animals arrive at the testing facility they require a...

Reed, B., Beatham, S., Carter, S. et al. 2017. Report of a RSPCA/APHA meeting on the welfare of wild animals used in research. Animal Technology and Welfare 16(1), 13-25. [Meeting Report]

This is a report of a one-day meeting jointly convened by the RSPCA and the Animal and Plant Health Agency (APHA), which brought together around 70 researchers, veterinarians, animal technologists, regulators and others with an...

Hawkins, P., McNeilly, A., Watson, J. et al. 2017. Report of the 2016 RSPCA/UFAW Rodent and Rabbit Welfare Group meeting. Animal Technology and Welfare 16(2), 77-86.

The RSPCA/UFAW Rodent (and now Rabbit) Welfare Group held a one-day meeting on 1 November 2016 at the University of Edinburgh and was attended by 70 delegates. Presentation topics included refinements in blood sampling rodents...

Breacker, C., Tilley, C. 2017. DNA sampling by skin swabbing for Zebrafish (Danio rerio) and sticklebacks (Gasterosteus aculeatus). Animal Technology and Welfare 16(3), 211-213.

Fin clipping of live fish under anaesthesia is widely used to collect tissues samples for DNA extraction. However, this technique raises a number of ethical concerns, since the use of anaesthetic and/or physical fin damage...

Jones, S., Paul, E. S., Dayan, P. et al. 2017. Pavlovian influences on learning differ between rats and mice in a counterbalanced Go/NoGo judgement bias task. Behavioural Brain Research 331, 214-224.

Judgement bias tests of animal affect and hence welfare assume that the animal’s responses to ambiguous stimuli, which may herald positive or negative outcomes, are under instrumental control and reflect ‘optimism’ or ‘pessimism’ about what...

National Academies of Sciences, Engineering, and Medicine. 2017. Transportation of Laboratory Animals: Proceedings of a Workshop. The National Academies Press: Washington, DC, 106 pp.

To examine these issues [transportation of laboratory animals], the Roundtable on Science and Welfare in Laboratory Animal Use held a workshop on September 3-4, 2014, in Washington, DC. More than 200 people participated in the...

Stevens, C. H., Croft, D. P., Paull, G. C. et al. 2017. Stress and welfare in ornamental fishes: What can be learned from aquaculture? Journal of Fish Biology 91(2), 409-428.

The ornamental fish trade is estimated to handle up to 1.5 billion fishes. Transportation and handling of fishes imposes a range of stressors that can result in mortality at rates of up to 73%. Given...