Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Ausderau, K. K., Colman, R. J., Kabakov, S. et al. 2023. Evaluating depression- and anxiety-like behaviors in non-human primates. Frontiers in Behavioral Neuroscience 16, 1006065.

Depression and anxiety are some of the most prevalent and debilitating mental health conditions in humans. They can present on their own or as co-morbidities with other disorders. Like humans, non-human primates (NHPs) can develop...

Szabo, B., Ringler, E. 2023. Fear of the new? Geckos hesitate to attack novel prey, feed near objects and enter a novel space. Animal Cognition 26(2), 537–549.

Neophobia, the fear of novelty, is an ecologically important response which enables animals to avoid potentially harmful situations. Neophobia is a cognitive process by which individuals distinguish novelty from familiarity. In this study, we aimed...

Alizadeh, E. A., Graf, K., Schiwon, J. et al. 2023. Thirty years of telemetry-based data acquisition for cardiovascular drug safety evaluation: Applications and optimization. Journal of Pharmacological and Toxicological Methods 122, 107279.

Conducting safety evaluations of new drugs using conscious animals has been a specialty of our working group for thirty years. In this article, we review the various technical challenges and solutions dealt with over the...

Bissonnette, P. B., Waterman, J. M., Petersen, S. D. 2023. The use of infrared thermography to noninvasively measure the surface temperature of polar bears during bouts of social play. Zoo Biology 42(1), 38–44.

Infrared thermography or thermal imagery is a noninvasive tool that can be used to measure the temperature of surfaces. Typically, thermal imagery is used for construction or military purposes but is increasingly used as a...

Cambrelen, D., Nelson Slater, M. 2023. Case study: Modifying repetitive behavior in a polar bear (Ursus maritimus). Zoo Biology 42(3), 390–396.

Stereotypic pacing in zoo-housed carnivores has been intensively researched for decades, revealing that it is a subtly complex behavior with a highly variable etiology. While pacing can be an indicator of poor welfare, it can...

Ghavamian, Y., Minier, D. E., Jaffe, K. E. 2023. Effects of complex feeding enrichment on the behavior of captive Malayan sun bears (Helarctos malayanus). Journal of Applied Animal Welfare Science 26(4), 670–684.

All zoos grapple with challenges of keeping captive animals engaged in natural behaviors, especially for bears which prove to be among the more challenging species to keep stimulated. In captivity, a common indicator of poor...

Hube, D., van Meegen, C., Herbrandt, S. et al. 2023. Hair corticosterone concentration as a potential stress marker in pet rabbits. Veterinary Record 193(9), e3464.

Background As a prey species, rabbits tend to hide their illnesses and injuries. Consequently, pet rabbit owners often do not notice that their pet may be suffering. Methods Data on the housing and health of...

Lutz, C. K., Coleman, K., Hopper, L.M. et al. 2022. Nonhuman primate abnormal behavior: Etiology, assessment, and treatment. American Journal of Primatology 84(6), e23380.

Across captive settings, nonhuman primates may develop an array of abnormal behaviors including stereotypic and self-injurious behavior. Abnormal behavior can indicate a state of poor welfare, since it is often associated with a suboptimal environment...

Bernstein‐Kurtycz, L. M., Wiatroski, K. G., Leeds, A. et al. 2022. About pace: How variations in method and definition affect quantification of pacing in bears. Zoo Biology 41(4), 365-372.

Repetitive pacing behavior is exhibited by many species in zoos and is particularly prevalent in carnivores with large home ranges, such as bears. Pacing can be a behavioral indicator of poor welfare, however, understanding this...

Fernandez, E. J. 2021. Appetitive search behaviors and stereotypies in polar bears (Ursus maritimus). Behavioural Processes 182, 104299.

Stereotypies in captive animals have been defined as repetitive, largely invariant patterns of behavior that serve no obvious goal or function. Stereotypies are commonly attributed to boredom or stress and are typically treated by enriching...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Chmurska-Gąsowska, M., Sowińska, N., Pałka, S. et al. 2021. Non-invasive measurement of thyroid hormones in domestic rabbits. Animals 11(5), 1194.

Thyroid hormones are essential for metabolism, energy homeostasis and reproduction. Hormones can be measured in various biological source materials: blood, feces, urine, saliva and others. The aim of our study was to verify usefulness of...

Yolles, J. N., Lee-Stubbs, R. B. 2021. Comparison of direct and indirect methods of measuring arterial blood pressure in healthy, anesthetized African green monkeys (Chlorocebus aethiops). JAALAS 60(2), 229-237.

Quantitative blood pressure measurement is a critical parameter for assessing cardiovascular health, monitoring physiologic status under anesthesia, and making clinical decisions. The placement of an arterial catheter is the most accurate way to measure blood...

Vonk, J., McGuire, M. C., Johnson-Ulrich, Z. 2021. Bearing fruit: Piloting a novel judgment bias task in an American black bear. Zoo Biology 40(2), 89-97.

Judgment bias tasks can reveal changes in affect in animals as a function of environmental manipulations such as provision of enrichment. We assessed affect in an American black bear across seasonal changes in availability of...

Travain, T., Valsecchi, P. 2021. Infrared thermography in the study of animals’ emotional responses: A critical review. Animals 11(9), 2510.

Whether animals have emotions was historically a long-lasting question but, today, nobody disputes that they do. However, how to assess them and how to guarantee animals their welfare have become important research topics in the...

Hammond, C. 2020. Comparing the frequency of stereotypical and non-stereotypical behaviours in captive brown bears (Ursus arctos arctos) at The Wildwood Trust. RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 47(1), 4-7.

Zoos play an important role in conservation, participating in captive breeding programmes and scientific research. The research can be shared and inform practice in the field and zoos. A behavioural observation study was conducted on...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

Munari, C., Ponzio, P., Macchi, E. et al. 2020. A multifactorial evaluation of different reproductive rhythms and housing systems for improving welfare in rabbit does. Applied Animal Behaviour Science 230, 105047.

The most widespread reproductive rhythm practiced in rabbit farming is based on artificial insemination (AI) performed at around 11 days pospartum. This approach results in high production rates, but requires high yearly replacement of animals...

McMahon, S. A., Wigham, E. 2020. ‘All Ears’: A questionnaire of 1516 owner perceptions of the mental abilities of pet rabbits, subsequent resource provision, and the effect on welfare. Animals 10(10), 1730.

Pet rabbit welfare is a hidden crisis: Inappropriately housed, fed, and not routinely provided healthcare—rabbits can often suffer painful conditions and shortened lifespans. This study provides novel understanding of owners’ perceptions of rabbits’ mental capabilities...

McFarland, R., Barrett, L., Fuller, A. et al. 2020. Infrared thermography cannot be used to approximate core body temperature in wild primates. American Journal of Primatology 82, e23204.

Understanding the physiological processes that underpin primate performance is key if we are to assess how a primate might respond when navigating new and changing environments. Given the connection between a mammal's ability to thermoregulate...

Lambert, H., Carder, G., D'Cruze, N. 2019. Given the cold shoulder: A review of the scientific literature for evidence of reptile sentience. Animals 9(10), 821.

We searched a selection of the scientific literature to document evidence for, and explorations into reptile sentience. The intention of this review was to highlight; (1) to what extent reptile capability for emotions have been...

Van Horn, R. C., Sutherland-Smith, M., Bracho Sarcos, A. E. et al. 2019. The Andean bear alopecia syndrome may be caused by social housing. Zoo Biology 38(5), 434-441.

The Andean bear alopecia syndrome is a progressive and chronic condition documented in ex situ populations. Recent advances focus on treating symptoms, not preventing future cases. We therefore explored the epidemiology of this syndrome through...

McMillan, F. D. (ed). 2019. Mental Health and Well-being in Animals (2nd ed). CABI, Wallingford, UK.

This second edition is fully revised, expanded, and comprehensively updated with the most current knowledge about the full array of mental health issues seen in animals. Written by key opinion leaders, internationally-recognized experts and specialists...

Bacon, H. 2018. Behaviour-based husbandry—A holistic approach to the management of abnormal repetitive behaviors. Animals 8(7), 103.

The field of zoo animal welfare science has developed significantly over recent years. However despite this progress in terms of scientific research, globally, zoo animals still face many welfare challenges. Recently, animal welfare frameworks such...

Wagman, J. D., Lukas, K. E., Dennis, P. M. et al. 2018. A work-for-food enrichment program increases exploration and decreases stereotypies in four species of bears. Zoo Biology 37(1), 3–15.

Zoo‐housed bears are prone to exhibiting stereotypic behaviors, generally considered indicators of negative welfare. We explored the effects of a variable‐time feeding enrichment schedule on behavioral indicators of welfare in four bear species at Cleveland...