Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Ekesbo, I., Gunnarsson, S. 2018. Farm Animal Behaviour: Characteristics for Assessment and Welfare (2nd ed). CABI, Wallingford, UK.

Completely updated and revised, and with a new author team, this second edition of Farm Animal Behaviour continues to provide essential information on normal and stereotypic behaviors in a wide variety of farm animals to...

Pawluski, J., Jego, P., Henry, S. et al. 2017. Low plasma cortisol and fecal cortisol metabolite measures as indicators of compromised welfare in domestic horses (Equus caballus). PLOS ONE 12(9), e0182257.

The hypothalamic-pituitary-adrenal (HPA) axis response to chronic stress is far from straight forward, particularly with regards to animal welfare. There are reports of no effect as well as both decreases and increases in cortisol after...

Viksten, S. M., Visser, E. K., Nyman, S. 2017. Developing a horse welfare assessment protocol. Animal Welfare 26(1), 59-65.

This paper describes the development and pilot-testing of a horse welfare assessment protocol (HWAP). The HWAP consists of the collective measurement of numerous factors considered likely to affect a horse's welfare and is thereby designed...

Hintze, S., Roth, E., Bachmann, I. et al. 2017. Toward a choice-based judgment bias task for horses. Journal of Applied Animal Welfare Science 20(2), 123-136.

Judgment bias tasks for nonhuman animals are promising tools to assess emotional valence as a measure of animal welfare. In view of establishing a valid judgment bias task for horses, the present study aimed to...

Krebs, B. L., Torres, E., Chesney, C. et al. 2017. Applying behavioral conditioning to identify anticipatory behaviors. Journal of Applied Animal Welfare Science 20(2), 155-175.

The ability to predict regular events can be adaptive for nonhuman animals living in an otherwise unpredictable environment. Animals may exhibit behavioral changes preceding a predictable event; such changes reflect anticipatory behavior. Anticipatory behavior is...

Sadiq, M., Ramanoon, S., Shaik Mossadeq, W. et al. 2017. Association between lameness and indicators of dairy cow welfare based on locomotion scoring, body and hock condition, leg hygiene and lying behavior. Animals 7(11), 79.

Dairy cow welfare is an important consideration for optimal production in the dairy industry. Lameness affects the welfare of dairy herds by limiting productivity. Whilst the application of LS systems helps in identifying lame cows...

Musk, G., Jacobsen, S., Hyndman, T. et al. 2017. Objective measures for the assessment of post-operative pain in Bos indicus bull calves following castration. Animals 7(10), 76.

The aim of the study was to assess pain in Bos indicus bull calves following surgical castration. Forty-two animals were randomised to four groups: no castration (NC, n = 6); castration with pre-operative lidocaine (CL...

Oliver, V. L., Athavale, S., Simon, K. E. et al. 2017. Evaluation of pain assessment techniques and analgesia efficacy in a female guinea pig (Cavia porcellus) model of surgical pain. JAALAS 56(4), 425-435.

Guinea pigs (Cavia porcellus) are a frequently used species in research, often involving potentially painful procedures. Therefore, evidence-based recommendations regarding analgesia are critically needed to optimize their wellbeing. Our laboratory examined the efficacy of carprofen...

von Keyserlingk, M. A. G., Amorim Cestari, A., Franks, B. 2017. Dairy cows value access to pasture as highly as fresh feed. Scientific Reports 7, 44953.

Many dairy cows in the developed world are now housed exclusively indoors with fewer than 5% of the 10 million lactating cows in the United States having access to pasture during the grazing season. Indoor...

Hawkins, P., McNeilly, A., Watson, J. et al. 2017. Report of the 2016 RSPCA/UFAW Rodent and Rabbit Welfare Group meeting. Animal Technology and Welfare 16(2), 77-86.

The RSPCA/UFAW Rodent (and now Rabbit) Welfare Group held a one-day meeting on 1 November 2016 at the University of Edinburgh and was attended by 70 delegates. Presentation topics included refinements in blood sampling rodents...

Moszuti, S. A., Wilkinson, A., Burman, O. H. P. 2017. Response to novelty as an indicator of reptile welfare. Applied Animal Behaviour Science 193, 98-103.

Whilst a great deal of research has been focused on identifying ways to assess the welfare of captive mammals and birds, there is comparatively little knowledge on how reptilian species are affected by captivity, and...

Ebinghaus, A., Ivemeyer, S., Lauks, V. et al. 2017. How to measure dairy cows’ responsiveness towards humans in breeding and welfare assessment? A comparison of selected behavioural measures and existing breeding traits. Applied Animal Behaviour Science 196, 22-29.

For dairy cattle breeding as well as animal welfare science reliability and validity issues regarding measures of cows’ responsiveness towards humans are relevant. The objective of this study was to investigate reliability and validity aspects...

Lambert (Proctor), H. S., Carder, G. 2017. Looking into the eyes of a cow: Can eye whites be used as a measure of emotional state? Applied Animal Behaviour Science 186, 1-6.

A number of studies have looked at whether the percentage of visible eye whites could be a reliable and dynamic tool for measuring emotional state in cattle. In this study we have built upon previous...

Waran, N., Randle, H. 2017. What we can measure, we can manage: The importance of using robust welfare indicators in Equitation Science. Applied Animal Behaviour Science 190, 74-81.

Ever since the phrase, ‘the happy athlete’ was introduced into the FEI rules for dressage (Article 401.1) there have been discussions about what this actually means and whether it is possible to recognize and reward...

Hintze, S., Murphy, E., Bachmann, I. et al. 2017. Qualitative Behaviour Assessment of horses exposed to short-term emotional treatments. Applied Animal Behaviour Science 196, 44-51.

Assessing emotion in animals is fundamental to the study of animal welfare with methodologies for reliable and valid assessments being highly desirable. Qualitative Behaviour Assessment (QBA) is based on the assumption that human observers are...

Rose, P. E., Nash, S. M., Riley, L. M. 2017. To pace or not to pace? A review of what abnormal repetitive behavior tells us about zoo animal management. Journal of Veterinary Behavior 20, 11-21.

Performance of abnormal repetitive behavior (ARB) is noted in many captive wild species. ARB can be categorized into 2 basic forms: those whose aim appears to be to compulsively reach an inappropriate goal and those...

Reid, K., Rogers, C. W., Gronqvist, G. et al. 2017. Anxiety and pain in horses measured by heart rate variability and behavior. Journal of Veterinary Behavior 22, 1-6.

As a herd species, the horse strongly desires social contact and interaction with conspecifics. Anxiety associated with social isolation may confound the display and interpretation of behavior associated with pain. This study examined the effect...

Hill, H. M. 2017. The psychology of cows? A case of over-interpretation and personification. Animal Behavior and Cognition 4(4), 506–511.

Reviews of existing literature on topics that have been neglected, such as the subject of the cognitive and affective abilities of cows, are productive and necessary exercises in science (Elwen, Findlay, Kiszka, & Weir, 2011...

Marino, L., Allen, K. 2017. The psychology of cows. Animal Behavior and Cognition 4(4), 474–498

Domestic cows (Bos taurus) are consumed worldwide as beef and veal, kept as dairy product producers, employed as draft animals in labor, and are used for a long list of other products, including leather and...

Perdue, B. 2017. Mechanisms underlying cognitive bias in nonhuman primates. Animal Behavior and Cognition 4(1), 105–118.

Recent research in nonhuman animals highlights the exciting possibility that performance on cognitive bias tasks might indirectly measure an individual’s subjective, affective state. Subjects first learn to perform a conditional discrimination task with two differentially...

Hintze, S., Smith, S., Patt, A. et al. 2016. Are eyes a mirror of the soul? What eye wrinkles reveal about a horse’s emotional state. PLOS ONE 11(10), e0164017.

Finding valid indicators of emotional states is one of the biggest challenges in animal welfare science. Here, we investigated in horses whether variation in the expression of eye wrinkles caused by contraction of the inner...

Foditsch, C., Oikonomou, G., Machado, V. S. et al. 2016. Lameness prevalence and risk factors in large dairy farms in upstate New York. Model development for the prediction of claw horn disruption lesions. PLOS ONE 11(1), e0146718.

The main objectives of this prospective cohort study were a) to describe lameness prevalence at drying off in large high producing New York State herds based on visual locomotion score (VLS) and identify potential cow...

Dalla Costa, E., Dai, F., Lebelt, D. et al. 2016. Welfare assessment of horses: the AWIN approach. Animal Welfare 25(4), 481-488.

The EU-funded Animal Welfare Indicators (AWIN) research project (2011–2015) aimed to improve animal welfare through the development of practical on-farm animal welfare assessment protocols. The present study describes the application of the AWIN approach to...

Drude, N., Pawlowsky, K., Tanaka,H. et al. 2016. Severity assessment in rabbits after partial hepatectomy: Part II. Laboratory Animals 50(6), 468-475.

Although the recognition of pain, distress and discomfort has already been described in 1985 by Morton and Griffiths there is still very little known about the establishment of score sheets especially, regarding postsurgical pain and...

Dalla Costa, E., Stucke, D., Dai, F. et al. 2016. Using the Horse Grimace Scale (HGS) to assess pain associated with acute laminitis in horses (Equus caballus). Animals 6(8), 47.

Acute laminitis is a common equine disease characterized by intense foot pain, both acutely and chronically. The Obel grading system is the most widely accepted method for describing the severity of laminitis by equine practitioners...