Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Lowe, G. L., Sutherland, M. A., Waas, J. R. et al. 2021. Effect of milk allowance on the suitability of automated behavioural and physiological measures as early disease indicators in calves. Applied Animal Behaviour Science 234, 105202.

This study investigated the effect of milk allowance on the suitability of behavioural and physiological responses, individually and in combination, as early disease indicators. A total of 120 heifer calves were assigned into a 5...

Olson, M. J., Creamer, M., Horback, K. M. 2021. Identification of specific call types produced by pre-weaning gilts in response to isolation. Applied Animal Behaviour Science 234, 105203.

Monitoring the vocalizations produced by livestock in commercial facilities can be used to remotely assess the arousal, and perhaps welfare, of the animals. Domestic swine is an ideal candidate for this type of assessment as...

Uenishi, S., Oishi, K., Kojima, T. et al. 2021. A novel accelerometry approach combining information on classified behaviors and quantified physical activity for assessing health status of cattle: A preliminary study. Applied Animal Behaviour Science 235, 105220.

Evaluation of animal behavior provides information on health and well-being in animals. In this preliminary study, we investigated the effectiveness of an accelerometry approach to evaluate changes in health status of cattle by combining physical...

Camerlink, I., Proßegger, C., Kubala, D. et al. 2021. Keeping littermates together instead of social mixing benefits pig social behaviour and growth post-weaning. Applied Animal Behaviour Science 235, 105230.

The importance of social stability and its influence on the expression of the social behaviour repertoire in domestic animals remains poorly understood, especially for affiliative behaviours and other putative socio-positive behaviours such as social play...

Berlinghieri, F., Panizzon, P., Penry-Williams, I. L. et al. 2021. Laterality and fish welfare - A review. Applied Animal Behaviour Science 236, 105239.

Humans interact with fishes in many contexts including aquaculture, scientific study and companion animals. In all of these contexts, fish welfare can be compromised through anthropogenic means. Concern for fish welfare has grown considerably in...

Yamada, P. H., Codognoto, V. M., Rydygier de Ruediger, F. et al. 2021. Pain assessment based on facial expression of bulls during castration. Applied Animal Behaviour Science 236, 105258.

Bovine castration can be performed surgically, chemically, or immunologically and the method used can influence animal welfare. The use of facial expressions is an efficient tool to quantify pain, but there has been limited study...

Salzer, Y., Honig, H. H., Shaked, R. et al. 2021. Towards on-site automatic detection of noxious events in dairy cows. Applied Animal Behaviour Science 236, 105260.

Successful detection of pain in cows could circumscribe the therapeutic window for treatment before the cow's condition deteriorates further. While severe clinical cases that are characterized as painful have clear behavioral and physiological manifestations, mild...

Laurijs, K. A., Briefer, E. F., Reimert, I. et al. 2021. Vocalisations in farm animals: A step towards positive welfare assessment. Applied Animal Behaviour Science 236, 105264.

Public concern for farm animal welfare is increasing. Animal welfare is defined as the balance of positive and negative emotions, where positive emotions are key to a good animal life. Emotion is defined as an...

Coleman, K., Shapiro, S. J. (Eds.). 2021. Behavioral Biology of Laboratory Animals (1st ed). CRC Press, Boca Raton, FL.

This 30-chapter volume informs students and professionals about the behavioral biology of animals commonly housed in laboratory and other captive settings. Each species evolved under specific environmental conditions, resulting in unique behavioral patterns, many of...

Prior, H., Holbrook, M. 2021. Strategies to encourage the adoption of social housing during cardiovascular telemetry recordings in non-rodents. Journal of Pharmacological and Toxicological Methods 108, 106959.

The National Centre for the Replacement, Refinement and Reduction of Animals in Research (NC3Rs) is working with industry to promote social housing during cardiovascular telemetry recordings within non-rodent safety pharmacology and toxicology studies. Following surveys...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

van Eerdenburg, F. J. C. M., Di Giacinto, A. M., Hulsen, J. et al. 2021. A new, practical animal welfare assessment for dairy farmers. Animals 11(3), 881.

The Welfare Quality® assessment protocol (WQ) is the most extensive way to measure animal welfare. This study was set up to determine if resource-based welfare indicators, that are easier and faster to measure, could replace...

Herlin, A., Brunberg, E., Hultgren, J. et al. 2021. Animal welfare implications of digital tools for monitoring and management of cattle and sheep on pasture. Animals 11(3), 829.

The opportunities for natural animal behaviours in pastures imply animal welfare benefits. Nevertheless, monitoring the animals can be challenging. The use of sensors, cameras, positioning equipment and unmanned aerial vehicles in large pastures has the...

van Eerdenburg, F. J. C. M., Hof, T., Doeve, B. et al. 2021. The relation between hair-cortisol concentration and various welfare assessments of Dutch dairy farms. Animals 11(3), 821.

Many protocols have been developed to assess farm animal welfare. However, the validity of these protocols is still subject to debate. The present study aimed to compare nine welfare assessment protocols, namely: (1) Welfare Quality©...

Mahendran, S. A., Wathes, D. C., Booth, R. E. et al. 2021. The health and behavioural effects of individual versus pair housing of calves at different ages on a UK commercial dairy farm. Animals 11(3), 612.

Housing management of dairy calves is one of the factors that contributes to a successful rearing outcome. Individual housing of pre-weaned calves is thought to provide enhanced biosecurity and easier monitoring of the individual, and...

Ryan, M., Waters, R., Wolfensohn, S. 2021. Assessment of the welfare of experimental cattle and pigs using the animal welfare assessment grid. Animals 11(4), 999.

The Animal Welfare Assessment Grid (AWAG) is a method for assessing quality of life, originally designed for experimental primates. This study adapts the AWAG for use in cattle and pigs, by adapting the factors included...

Shao, H., Pu, J., Mu, J. 2021. Pig-posture recognition based on computer vision: Dataset and exploration. Animals 11(5), 1295.

Posture changes in pigs during growth are often precursors of disease. Monitoring pigs’ behavioral activities can allow us to detect pathological changes in pigs earlier and identify the factors threatening the health of pigs in...

Tschoner, T. 2021. Methods for pain assessment in calves and their use for the evaluation of pain during different procedures—A review. Animals 11(5), 1235.

The evaluation and assessment of the level of pain calves are experiencing is important, as the experience of pain (e.g., due to routine husbandry procedures) severely affects the welfare of calves. Studies about the recognition...

Uiuiu, P., Lațiu, C., Păpuc, T. et al. 2021. Multi-approach assessment for stress evaluation in rainbow trout females, Oncorhynchus mykiss (Walbaum, 1792) from three different farms during the summer season. Animals 11(6), 1810.

Blood biochemistry parameters are valuable tools for monitoring fish health. Their baseline values are still undefined for a multitude of farmed fish species. In this study, changes in the blood profile of rainbow trout females...

Besteiro, R., Arango, T., Ortega, J. et al. 2021. Long-term measurement of piglet activity using passive infrared detectors. Animals 11(6), 1607.

Measuring animal activity is useful for monitoring animal welfare in real time. In this regard, passive infrared detectors have been used in recent years to quantify piglet activity because of their robustness and ease of...

Steagall, P. V., Bustamante, H., Johnson, C. B. et al. 2021. Pain management in farm animals: Focus on cattle, sheep and pigs. Animals 11(6), 1483.

Pain causes behavioral, autonomic, and neuroendocrine changes and is a common cause of animal welfare compromise in farm animals. Current societal and ethical concerns demand better agricultural practices and improved welfare for food animals. These...

Manthey, T., Nagel-Riedasch, S., Dülsner, A. 2021. The interactive stress assessment in basic animal science training. Animals 11(7), 2145.

In order to assess the extent to which the legally prescribed training for the acquisition of animal experimentation expertise provides scientific personnel with the necessary competence and expertise to carry out a correct harm-benefit analysis...

Liu, X., Song, P., Yan, H. et al. 2021. Comparison of the behavior, physiology, and offspring resilience of gestating sows when raised in a group housing system and individual stalls. Animals 11(7), 2076.

Being in a confined environment causes chronic stress in gestating sows, which is detrimental for sow health, welfare and, consequently, offspring physiology. This study assessed the health and welfare of gestating sows housed in a...

Whittaker, A. L., Golder-Dewar, B., Triggs, J. L. et al. 2021. Identification of animal-based welfare indicators in captive reptiles: A Delphi consultation survey. Animals 11(7), 2010.

There is an increasing focus on evidence-based welfare assessment by animal care staff in zoos, along with a strong interest in animal welfare by the zoo-visiting public, to the extent that this can influence their...

Ji, W., Bi, Y., Cheng, Z. et al. 2021. Impact of early socialization environment on social behavior, physiology and growth performance of weaned piglets. Applied Animal Behaviour Science 238, 105314.

Weaning and mixing cause substantial social stress among piglets and frequently lead to stress, injury, inflammation, immunosuppression and growth retardation. This study aimed to investigate the effects of different early social environments on social behavior...