Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Davis, A. K., Garner, J. P., Chu, D. K. et al. 2022. Propofol immersion as a euthanasia method for adult zebrafish (Danio rerio). Comparative Medicine 72(3), 204-209.

The exponential rise of the zebrafish (Danio rerio) as a model organism in biomedical research has far outstripped our un- derstanding of basic husbandry and welfare for this species. As a case in point, here...

Marques Maia, C., Volpato, G. L., Braithwaite, V. A. 2022. A psychological aversive condition does not change individual zebrafish preference for background color or artificial plant enrichments. Journal of Applied Animal Welfare Science 25(4), 427-438.

Information on fish preference for environmental conditions can be a useful tool to offer them what they want, an important requirement for welfare purposes. Giving that such an approach deals with psychological states of the...

Tetlow, S. A. J., Brennan, M. L., Garcia-Ara, A. 2022. Welfare indicators for stunning versus non-stunning slaughter in sheep and cattle: A scoping review. Vet Record 191(6), e1739.

Background: While most cattle and sheep in the United Kingdom are stunned before slaughter, non-stun methods are permitted to supply meat to specific consumers. This study aimed to identify the existing literature that compared animal...

Ferreira, J. M., Félix, L., Jorge, S. et al. 2022. Anesthesia overdose versus rapid cooling for euthanasia of adult zebrafish. Zebrafish 19(4), 148-159.

The rapid increase in zebrafish use needs to be accompanied by research into the refinement of procedures. The European (EU) Directive lists three possible euthanasia methods for fish: anesthetic overdose, electrical stunning, and concussion. However...

Korenyi-Both, J., Vidaurre, J., Held, T. et al. 2022. Description of electroencephalographic data gathered using water-based medium-expansion foam as a depopulation method for nursery pigs. Scientific Reports 12(1), 16798.

The United States’ swine industry is under constant threat of foreign animal diseases, which may emerge without warning due to the globalized transportation networks moving people, animals, and products. Therefore, having disease control and elimination...

Korenyi-Both, J., Vidaurre, J., Held, T. et al. 2022. Description of electroencephalographic data gathered using water-based medium-expansion foam as a depopulation method for nursery pigs. Scientific Reports 12(1), 16798.

The United States’ swine industry is under constant threat of foreign animal diseases, which may emerge without warning due to the globalized transportation networks moving people, animals, and products. Therefore, having disease control and elimination...

Martin, J. E., Baxter, E. M., Clarkson, J. M. et al. 2022. Characterizing candidate decompression rates for hypobaric hypoxic stunning of pigs. Part 1: Reflexive behavior and physiological responses. Frontiers in Veterinary Science 9, 1027878.

Alternatives to carbon dioxide (CO2) stunning for the commercial slaughter of pigs are urgently needed because there is robust evidence that exposing pigs to hypercapnic environments is associated with pain, fear, and distress. Hypobaric hypoxia...

Prentice, P. M., Houslay, T. M., Wilson, A. J. 2022. Exploiting animal personality to reduce chronic stress in captive fish populations. Frontiers in Veterinary Science 9, 1046205.

Chronic stress is a major source of welfare problems in many captive populations, including fishes. While we have long known that chronic stress effects arise from maladaptive expression of acute stress response pathways, predicting where...

Torgerson-White, L., Sánchez-Suárez, W. 2022. Looking beyond the shoal: Fish welfare as an individual attribute. Animals 12(19), 2592.

Welfare is an individual attribute. In general, providing captive nonhuman animals with conditions conducive to good welfare is an idea more easily applied when dealing with few individuals. However, this becomes much harder—if not impossible—under...

Hepps Keeney, C., Harrison, T. M. 2022. Euthanasia complications in non-domestic species. Journal of Zoological and Botanical Gardens 3(4), 616–623.

There are very few studies describing euthanasia complications in non-domestic species. The goal of this study was to survey veterinarians to determine what complications may commonly occur during the euthanasia of non-domestic species. An online...

Husheer, J., Luepke, M., Dziallas, P. et al. 2021. Electrocution as an alternative euthanasia method to blunt force trauma to the head followed by exsanguination for non-viable piglets. Acta Veterinaria Scandinavica 62, 67.

On farms, the currently approved and most widely practised method of euthanising non-viable piglets is blunt force trauma to the head followed by exsanguination. However, the use of this method is criticised due to public...

Ramos, J., Balasch, J. C., Tort, L. 2021. About welfare and stress in the early stages of fish. Frontiers in Veterinary Science 8, 634434.

In conclusion, the investigations carried out up to now demonstrate that during the early stages fish show high sensitivity to many types of stressors involving an array of responses to overcome alterations that could affect...

Fife-Cook, I., Franks, B. 2021. Koi (Cyprinus rubrofuscus) seek out tactile interaction with humans: General patterns and individual differences. Animals 11(3), 706.

The study of human–animal interactions has provided insights into the welfare of many species. To date, however, research has largely focused on human relationships with captive mammals, with relatively little exploration of interactions between humans...

Dalla Costa, F. A., Gibson, T. J., Oliveira, S. E.O. et al. 2021. On-farm culling methods used for pigs. Animal Welfare 30(4), 507-522.

The culling of injured and non-viable pigs (Sus scrofa) (neonate to breeding stock) is a routine and necessary procedure on most farms. Usually, pigs are culled using one of the following methods: blunt-force trauma (manual...

Edwards, S. (Ed.) 2021. Understanding the behaviour and improving the welfare of pigs. Burleigh Dodds Science Publishing Limited, Sawston, Cambridge, UK. 594 p.

With growing concern from consumers and regulatory agencies about the welfare of farmed animals such as pigs, the livestock sector must assess how animal welfare can be improved whilst ensuring livestock production remains economically and...

Collins, S. L., Kull, J., Benham, C. et al. 2020. Comparison of penetrating and non-penetrating captive bolt in an alternative occipital approach in calves. Animal Welfare 29(1), 59-67.

The objective of this study was to describe the effect of penetrating or non-penetrating captive bolt using an occipital approach in 4–5 month old, Holstein steers weighing between 100–200 kg. Twelve calves were divided into...

Walker, J., Roman-Muniz, I., Edwards-Callaway, L. 2020. Timely euthanasia in the United States dairy industry–Challenges and a path forward. Animals 10(1), 71.

Euthanasia is a valuable management tool utilized on dairies to end the suffering of sick or debilitated cows. Euthanasia should be implemented if an animal’s pain cannot be adequately alleviated and if there is a...

Vecerek, V., Kamenik, J., Voslarova, E. et al. 2020. The impact of deviation of the stun shot from the ideal point on motor paralysis in cattle. Animals 10(2), 280.

The effect on motor paralysis of a deviation in the stun shot placement from the ideal point on cattle skulls was monitored in 627 bovine animals (271 bulls and 356 cows) stunned with a captive...

Neave, H. W., Costa, J. H. C., Weary, D. M. 2020. Long-term consistency of personality traits of cattle. Royal Society Open Science 7(2), 7191849.

Personality is often defined as the behaviour of individual animals that is consistent across contexts and over time. Personality traits may become unstable during stages of ontogeny from infancy to adulthood, especially during major periods...

Składanowska-Baryza, J., Ludwiczak, A., Pruszyńska-Oszmałek, E. et al. 2020. Effect of two different stunning methods on the quality traits of rabbit meat. Animals 10(4), 700.

The aim of the study was to assess the effect of two different stunning methods on the level of blood stress indicators (cortisol, insulin, glucose) and rabbit meat quality. The experiment was conducted on crossbreds...

Çavuşoğlu, E., Rault, J.-L., Gates, R. et al. 2020. Behavioral response of weaned pigs during gas euthanasia with CO2, CO2 with butorphanol, or nitrous oxide. Animals 10(5), 787.

The swine industry is often forced to euthanize pigs in the first few weeks of life due to injuries, hernias, or unthriftiness. The majority of pigs are euthanized using carbon dioxide (CO2) gas asphyxiation but...

Chu, D. 2020. Malawi cichlids: A colorful 4th R story. Laboratory Animal Science Professional 8(3) (May/June), 24-25.

This article describes the successful rehoming of 60 Malawi cichlids from a vivarium at Stanford University to San Diego Zoo and the California Academy of Sciences.

Parois, S. P., Duttlinger, A. W., Richert, B. T. et al. 2020. Effects of three distinct 2-week long diet strategies after transport on weaned pigs' short and long-term welfare markers, behaviors, and microbiota. Frontiers in Veterinary Science 7, 140.

Alternative feed supplements have shown promising effects in terms of performance, but their effects on welfare have had little evaluation. In the present study, we aimed at evaluating the effect of diet supplementation on welfare...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

Shomer, N. H., Allen-Worthington, K. H., Hickman, D. L. et al. 2020. Review of rodent euthanasia methods. JAALAS 59(3), 242–253.

The optimal choice of euthanasia method for laboratory rodents depends on a number of factors, including the scientific goals of the study, the need to minimize animal pain and/or distress, applicable guidelines and laws, the...