Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Lagoda, M. E., Boyle, L. A., Marchewka, J. et al. 2021. Early detection of locomotion disorders in gilts using a novel visual analogue scale; associations with chronic stress and reproduction. Animals 11(10), 2900.

Locomotion scoring is crucial for the early detection of lameness, which reduces sow welfare and performance. Our objective was to test the effectiveness of a visual analogue scale (VAS) to measure locomotory ability (OVERALL) compared...

Segura-Göthlin, S., Fernández, A., Arbelo, M. et al. 2021. The validation of a non-invasive skin sampling device for detecting cetacean Poxvirus. Animals 11(10), 2814.

Poxvirus-like lesions are widely used as a potential health indicator in cetaceans, although for this application, corroboration of Poxvirus skin disease is imperative. Aiming to address skin biopsies intrusiveness, a preliminary investigation of a non-invasive...

Wang, G., Muhammad, A., Liu, C. et al. 2021. Automatic recognition of fish behavior with a fusion of RGB and optical flow data based on deep learning. Animals 11(10), 2774.

The rapid and precise recognition of fish behavior is critical in perceiving health and welfare by allowing farmers to make informed management decisions on recirculating aquaculture systems while reducing labor. The conventional recognition methods are...

Minnig, A., Zufferey, R., Thomann, B. et al. 2021. Animal-based indicators for on-farm welfare assessment in goats. Animals 11(11), 3138.

This review describes the current state of knowledge relating to scientific literature on welfare indicators for goats. Our aim was to provide an overview of animal-based indicators for on-farm welfare assessments. We performed a literature...

Diana, A., Salas, M., Pereboom, Z. et al. 2021. A systematic review of the use of technology to monitor welfare in zoo animals: Is there space for improvement? Animals 11(11), 3048.

A top priority of modern zoos is to ensure good animal welfare (AW), thus, efforts towards improving AW monitoring are increasing. Welfare assessments are performed through more traditional approaches by employing direct observations and time-consuming...

Dalmau, A., Sánchez-Matamoros, A., Molina, J. M. et al. 2021. Intramuscular vs. intradermic needle-free vaccination in piglets: Relevance for animal welfare based on an aversion learning test and vocalizations. Frontiers in Veterinary Science 8, 715260.

The aim of the present study was to compare intramuscular injection with a needle and intradermic needle-free vaccinations against porcine reproductive and respiratory syndrome (PRRS) in piglets at 28 days old by studying behavioral and...

Krugmann, K. L., Mieloch, F. J., Krieter, J. 2021. Can tail and ear postures be suitable to capture the affective state of growing pigs? Journal of Applied Animal Welfare Science 24(4), 411-423.

The present study examined whether tail and ear postures in fattening pigs (n = 228) housed in different environments could be suitable for assessing their affective state. In doing so, it investigated the appearance of...

Brandão, M. L., Dorigão-Guimarães, F., Bolognesi, M. C. et al. 2021. Understanding behaviour to improve the welfare of an ornamental fish. Journal of Fish Biology 99(3), 726-739.

Some common practices in aquaculture, ornamental trade and fish facilities may disturb the behavioural repertoire of fish and its natural adaptive value, reducing welfare and impairing fish production. Hence, it is necessary to understand fish...

D'Eath, R. B., Foister, S., Jack, M. et al. 2021. Changes in tail posture detected by a 3D machine vision system are associated with injury from damaging behaviours and ill health on commercial pig farms. PLOS ONE 16(10), e0258895.

To establish whether pig tail posture is affected by injuries and ill health, a machine vision system using 3D cameras to measure tail angle was used. Camera data from 1692 pigs in 41 production batches...

Miller, L. J., Lauderdale, L. K., Bryant, J. L. et al. 2021. Behavioral diversity as a potential positive indicator of animal welfare in bottlenose dolphins. PLOS ONE 16(8), e0253113.

Accredited zoological facilities are committed to fully understanding the behavioral, mental, and physical needs of each species to continuously improve the welfare of the animals under their professional care and detect when welfare has diminished...

Probert, R., Bastian, A., Elwen, S. H. et al. 2021. Vocal correlates of arousal in bottlenose dolphins (Tursiops spp.) in human care. PLOS ONE 16(9), e0250913.

Human-controlled regimes can entrain behavioural responses and may impact animal welfare. Therefore, understanding the influence of schedules on animal behaviour can be a valuable tool to improve welfare, however information on behaviour overnight and in...

Thatcher, D. 2021. The use of a borescope for Goodfellow’s tree kangaroo (Dendrolagus goodfellowi) husbandry. RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 48(2), 10-11.

In 2017 Bristol Zoological Gardens received two Goodfellow tree kangaroos. As this was a new marsupial species for the collection, keepers attended the European Symposium on tree kangaroos to better improve our husbandry, knowledge and...

Pfoh, R., Tiddi, B., Di Bitetti, M. S. et al. 2021. Grooming site preferences in black capuchin monkeys: Hygienic vs. social functions revisited. American Journal of Primatology 83(12), e23336.

When primates groom each other, they tend to concentrate on those parts of the body they cannot efficiently self-groom (i.e., not visually accessible), and prefer to intensify grooming in areas with high hair density, thus...

Hewitt, L., Small, A. 2021. Welfare of farmed crocodilians: Identification of potential animal-based measures using elicitation of expert opinion. Animals 11(12), 3450.

Animal-based measures are the measure of choice in animal welfare assessment protocols as they can often be applied completely independently to the housing or production system employed. Although there has been a small body of...

Edwards, S. (Ed.) 2021. Understanding the behaviour and improving the welfare of pigs. Burleigh Dodds Science Publishing Limited, Sawston, Cambridge, UK. 594 p.

With growing concern from consumers and regulatory agencies about the welfare of farmed animals such as pigs, the livestock sector must assess how animal welfare can be improved whilst ensuring livestock production remains economically and...

King, K., Joblon, M., McNally, K. et al. 2021. Assessing North Atlantic right whale (Eubalaena glacialis) welfare. Journal of Zoological and Botanical Gardens 2(4), 728–739.

Welfare assessments have been largely successful in improving management and quality of life for animals in human care. This has prompted an increased interest in their use for free-ranging wild animals to assess health, environment...

Reese, L., Ladwig-Wiegard, M., von Fersen, L. et al. 2020. Deflighting zoo birds and its welfare considerations. Animal Welfare 29(1), 69-80.

For over a century, the practice of deflighting has taken place in zoological collections in order to ensure birds remain in open-topped enclosures. Over time, efforts have been made to improve or develop new (surgical)...

Baciadonna, L., Briefer, E. F., McElligott, A. G. 2020. Investigation of reward quality-related behaviour as a tool to assess emotions. Applied Animal Behaviour Science 225, 104968.

Animals are likely to appraise events as positive or negative based on their subjective perception, current state and past experiences. We tested the effects of anticipating positive (food anticipation), negative (inaccessible food) and neutral (clicker...

Harvey, A., Beausoleil, N., Ramp, D. et al. 2020. A ten-stage protocol for assessing the welfare of individual non-captive wild animals: Free-roaming horses (Equus ferus caballus) as an example. Animals 10(1), 148.

Knowledge of the welfare status of wild animals is vital for informing debates about the ways in which we interact with wild animals and their habitats. Currently, there is no published information about how to...

Serres, A., Hao, Y., Wang, D. 2020. Swimming features in captive odontocetes: Indicative of animals’ emotional state? Behavioural Processes 170, 103998.

Captive welfare studies in odontocete species have been mostly conducted on bottlenose dolphins (Tursiops truncatus) while the welfare of many other species’ -including endangered species- remains poorly studied. More research is needed to find and...

Marino, L., Rose, N. A., Visser, I. N. et al. 2020. The harmful effects of captivity and chronic stress on the well-being of orcas (Orcinus orca). Journal of Veterinary Behavior 35, 69-82.

Orcas are large, deep-diving cetaceans who are known for their global distribution, wide-ranging behavior, intelligence, and social complexity. They possess one of the largest and most complex brains in the mammalian kingdom. However, they are...

Ross, S. R., Leinwand, J. G. 2020. A review of research in primate sanctuaries. Biology Letters 16(4), 1620200033.

While non-human primate studies have long been conducted in laboratories, and more recently at zoological parks, sanctuaries are increasingly considered a viable setting for research. Accredited sanctuaries in non-range countries house thousands of primates formerly...

Pfeifer, M., Schmitt, A., Hessel, E. 2020. Animal welfare assessment of fattening pigs: A case study on sample validity. Animals 10(3), 389.

A guide for animal welfare assessment of fattening pigs recommends recording some of the indicators for a sample of the animals from a herd. However, it is not certain whether the herd’s level of welfare...

Vullo, C., Barbieri, S., Catone, G. et al. 2020. Is the Piglet Grimace Scale (PGS) a useful welfare indicator to assess pain after cryptorchidectomy in growing pigs? Animals 10(3), 412.

Pig cryptorchidism is a congenital anomaly, which requires surgical intervention. Pain assessment in pig farming has some limitations and consumers are increasingly concerned about suffering linked to on-farm procedures. The PGS seems to be a...

Jorquera-Chavez, M., Fuentes, S., Dunshea, F. et al. 2020. Remotely sensed imagery for early detection of respiratory disease in pigs: A pilot study. Animals 10(3), 451.

Respiratory diseases are a major problem in the pig industry worldwide. Due to the impact of these diseases, the early identification of infected herds is essential. Computer vision technology, using RGB (red, green and blue)...