Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Jensen, V. F. H., Mølck, A.-M., Martensson, M. et al. 2017. Assessment of implantable infusion pumps for continuous infusion of human insulin in rats: Potential for group housing. Laboratory Animals 51(3), 273-283.

Group housing is considered to be important for rats, which are highly sociable animals. Single housing may impact behaviour and levels of circulating stress hormones. Rats are typically used in the toxicological evaluation of insulin...

Miranda, A., Pego, J. M., Correia-Pinto, J. 2017. Animal facility videoendoscopic intubation station: Tips and tricks from mice to rabbits. Laboratory Animals 51(2), 204-207.

Endotracheal intubation of laboratory animals is a common procedure shared by several research fields for different purposes, such as mechanical ventilation of anaesthetized animals, instillation of cytotoxic nanoparticles, infectious agents or tumour cells for induction...

Castelhano-Carlos, M. J., Baumans, V., Sousa, N. 2017. PhenoWorld: Addressing animal welfare in a new paradigm to house and assess rat behaviour. Laboratory Animals 51(1), 36-43.

The use of animals is essential in biomedical research. The laboratory environment where the animals are housed has a major impact on them throughout their lives and influences the outcome of animal experiments. Therefore, there...

Nordquist, R., van der Staay, F., van Eerdenburg, F. et al. 2017. Mutilating procedures, management practices, and housing conditions that may affect the welfare of farm animals: Implications for welfare research. Animals 7(2), 12.

A number of mutilating procedures, such as dehorning in cattle and goats and beak trimming in laying hens, are common in farm animal husbandry systems in an attempt to prevent or solve problems, such as...

Brenneis, C., Westhof, A., Holschbach, J. et al. 2017. Automated tracking of motion and body weight for objective monitoring of rats in colony housing. JAALAS 56(1), 18-31.

Living together in large social communities within an enriched environment stimulates self-motivated activity in rats. We developed a modular housing system in which a single unit can accommodate as many as 48 rats and contains...

Barker, T. H., Bobrovskaya, L., Howarth, G. S. et al. 2017. Female rats display fewer optimistic responses in a judgment bias test in the absence of a physiological stress response. Physiology & Behavior 173, 124-131.

Metabolic cages are a type of housing used in biomedical research. Metabolic cage housing has been demonstrated to elicit behavioural and physiological changes in rodents housed within them. The nature of this effect has been...

Jones, T., Robinson, M., Leach, M. et al. 2017. Ultrasonic vocalisation as a measure of positive welfare in rats. Animal Technology and Welfare 16(2), 127-129.

Studies of animal welfare in laboratory animals have historically relied on the measurement of negative indicators rather than the assessment of positive indicators of welfare. Practical methods of welfare assessment are required to allow refinement...

Holmes, J., Waters, D., Maisonave, I. et al. 2017. Social interaction for non-sibling pregnant New Zealand white rabbits on reproductive toxicology. Animal Technology and Welfare 16(2), 139-141.

Rabbits are gregarious animals that live in social groups in the wild so individually housing our animals, while meeting the present scientific objectives, restricts their natural social behaviour. How to meet the social needs of...

Zomeño, C., Birolo, M., Zuffellato, A. et al. 2017. Aggressiveness in group-housed rabbit does: Influence of group size and pen characteristics. Applied Animal Behaviour Science 194, 79-85.

The aim of this work was to study how the group size and the number of doorways in a pen may influence the aggressive interactions throughout the reproductive cycle among does kept in a part-time...

Bryan, K., Bremner-Harrison, S., Price, E. et al. 2017. The impact of exhibit type on behaviour of caged and free-ranging tamarins. Applied Animal Behaviour Science 193, 77-86.

The lack of appropriate stimuli associated with captive environments has been documented to cause several behavioural and physiological issues in captive species, including loss of natural behaviours, psychopathologies and decreased reproductive success. Providing free-ranging, naturalistic...

de Lima Rocha, A. D., Menescal-de-Oliveira, L., da Silva, L. F. S. 2017. Effects of human contact and intra-specific social learning on tonic immobility in guinea pigs, Cavia porcellus. Applied Animal Behaviour Science 191, 1-4.

Social learning is the capacity of animals to acquire adaptive information from others. In the case of fear responses, animals can learn fearful or non-fearful responses by observing the behavior of conspecifics. Tonic immobility (TI)...

Sutherland, M. A., Lowe, G. L., Watson, T. J. et al. 2017. Dairy goats prefer to use different flooring types to perform different behaviours. Applied Animal Behaviour Science 197, 24-31.

Flooring is an important component of indoor housing systems for livestock as it can impact animal hygiene and welfare. Therefore, the aim of this study was to evaluate the lying and elimination preferences of goats...

Serrapica, M., Boivin, X., Coulon, M. et al. 2017. Positive perception of human stroking by lambs: Qualitative behaviour assessment confirms previous interpretation of quantitative data. Applied Animal Behaviour Science 187, 31-37.

Qualitative behaviour assessment (QBA) was used to validate previous published interpretation whether human stroking has beneficial effects on lambs prematurely separated from their mothers. For a period of 8 weeks a familiar human (FH) subjected...

Li, S.-R., Hao, X., Bi, J.-H. et al. 2017. Why do female desert lizards construct burrows to lay eggs? Behaviour 154(9/10), 1051–1068.

Many oviparous animals construct well-designed nests to provide relatively favourable conditions for their eggs and hatchlings, but the direct evidence that nest structure can determine their reproductive success is insufficient. In the present study, we...

Lidster, K., Readman, G. D., Prescott, M. J. et al. 2017. International survey on the use and welfare of zebrafish Danio rerio in research. Journal of Fish Biology 90(5), 1891-1905.

A survey was conducted regarding zebrafish Danio rerio use for scientific research with a focus on: anaesthesia and euthanasia; housing and husbandry; breeding and production; refinement opportunities. A total of 98 survey responses were received...

Knapek, K. J., Adams, M. K., Ayers, J. D. 2017. What’s in our chamber of secrets? Python housing in a laboratory setting. Laboratory Animal Science Professional 5(4) (December), 16-19.

At Colorado State University we have an investigator who requested care for 2 different species of pythons, the green tree python (Morelia viridis) and the ball python (Python reguis), to study the pathology of an...

Makowska, I. J., Weary, D. M. 2016. Differences in anticipatory behaviour between rats (Rattus norvegicus) housed in standard versus semi-naturalistic laboratory environments. PLOS ONE 11(1), e0147595.

Laboratory rats are usually kept in relatively small cages, but research has shown that they prefer larger and more complex environments. The physiological, neurological and health effects of standard laboratory housing are well established, but...

Peeters, B. W. M. M. , Moeskops, M., Veenvliet, A. R. J. 2016. Color preference in Danio rerio: Effects of age and anxiolytic treatments. Zebrafish 13(4), 330-334.

Zebrafish are increasingly used in neurobiological and behavioral studies. Possible stimuli to manipulate zebrafish behavior are being investigated. The presentation of colors appears to be one of the most used approaches, but there is much...

Goodwin, N., Westall, L., Karp, N. A. et al. 2016. Evaluating and optimizing fish health and welfare during experimental procedures. Zebrafish 13(S1), S127-S131.

Many facilities house fish in separate static containers post-procedure, for example, while awaiting genotyping results. This ensures fish can be easily identified, but it does not allow for provision of continuous filtered water or diet...

Martín, O., Vinyoles, D., García-Galea, E. et al. 2016. Improving the welfare of a zoo-housed male drill (Mandrillus leucophaeus poensis) aggressive toward visitors. Journal of Applied Animal Welfare Science 19(4), 323-334.

Improving the welfare of nonhuman animals in captivity and maintaining behavioral competence for future conservation purposes is of the highest priority for zoos. The behavior of an aggressive male drill (Mandrillus leucophaeus poensis) was assessed...

Whittaker, A. L., Lymn, K. A., Howarth, G. S. 2016. Effects of metabolic cage housing on rat behavior and performance in the social interaction test. Journal of Applied Animal Welfare Science 19(4), 363-374.

Although the metabolic cage is commonly used for housing nonhuman animals in the laboratory, it has been recognized as constituting a unique stressor. Such an environment would be expected to affect behavioral change in animals...

Byrd, C. P., Winnicker, C., Gaskill, B. N. 2016. Instituting dark-colored cover to improve central space use within guinea pig enclosure. Journal of Applied Animal Welfare Science 19(4), 408-413.

Domestic guinea pigs (Cavia aperea f. porcellus) in laboratories have been shown to actively avoid the centers of their cages. This experiment tested a novel, dark-colored “shader” placed over the central portion of a cage...

Cornale, P., Macchi, E., Renna, M. et al. 2016. Effect of cage type on fecal corticosterone concentration in buck rabbits during the reproductive cycle. Journal of Applied Animal Welfare Science 19(1), 90-96.

Fecal corticosterone concentration (FCC) was measured in 14 buck rabbits individually housed in standard-dimension cages (SC) or in bigger cages (BC; with a volume more than double that of SC and equipped with a plastic...

Allen, K. P., Dwinell, M. R., Zappa, A. M. et al. 2016. Rat breeding parameters according to floor space available in cage. JAALAS 55(1), 21–24.

The cage floor space recommended for a female rat with a litter is greater in the 8th edition of the Guide for the Care and Use of Laboratory Animals than in previous editions. As a...

Makowska, I. J., Weary, D. M. 2016. The importance of burrowing, climbing and standing upright for laboratory rats. Royal Society Open Science 3, 160136.

Standard laboratory cages prevent rats (Rattus norvegicus) from performing many behaviours that they perform in the wild, but little is known about how this may affect their welfare. The aims of this study were (i)...