Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Warwick, C., Arena, P., Steedman, C. 2019. Spatial considerations for captive snakes. Journal of Veterinary Behavior 30, 37-48.

Captive environments for snakes commonly involve small enclosures with dimensions that prevent occupants from adopting straight line body postures. In particular, the commercial, hobby, and pet sectors routinely utilize small vivaria and racking systems, although...

Cox, R. J., Nol, P., Ellis, C. K. et al. 2019. Research with agricultural animals and wildlife. ILAR Journal 60(1), 66-73.

In fiscal year 2016, agricultural animals such as swine, sheep, goats, and cattle represented 10% of the 820 812 animals used in USDA-regulated research. In addition to traditional agricultural animals, research studies using captive wildlife...

White, K. 2019. Effects of captivity on the activity budgets of lar gibbons (Hylobates lar). Canopy 20(1), 43-45.

The keeping of gibbons in a captive environment and recreating an appropriate habitat is essential to enable them to exhibit species-specific behaviour. This research was designed to provide baseline data on the activity budgets of...

Fischer, C. P., Romero, L. M. 2019. Chronic captivity stress in wild animals is highly species-specific. Conservation Physiology 7(1), coz093.

Wild animals are brought into captivity for many reasons—conservation, research, agriculture and the exotic pet trade. While the physical needs of animals are met in captivity, the conditions of confinement and exposure to humans can...

Cooke, G. M. 2018. Use of a translucent refuge for Xenopus tropicalis with the aim of improving welfare. Laboratory Animals 52(3), 304-307.

Xenopus tropicalis is an increasingly important animal model in a variety of biological research fields. In many countries legislation exists to promote and increase welfare wherever possible, including the ability to view animals during daily...

Hawkins, P., McBride, A., Paiba, G. et al. 2018. Report of the 2017 RSPCA/UFAW Rodent and Rabbit Welfare Group meeting. Animal Technology and Welfare 17(2), 75-83. [Meeting Report]

The RSPCA/UFAW Rodent (and now Rabbit) Welfare Group held a one-day meeting on 14 November 2017 in Weybridge, UK. The first session addressed meeting animals' needs and aiming for a 'good life', with the needs...

Pearson, K., Gant, J. 2018. Improving rabbit enrichment: Developing a rolling enrichment plan. Animal Technology and Welfare 17(2), 121-123.

A three-week enrichment preference study trialling different substrates, food and pen structures was carried out in three, group-housed female New Zealand White Rabbits (NZW). Preference results: structural - rabbits spent the most time with a...

Stachowicz, J., Gygax, L., Hillmann, E. et al. 2018. Dairy goats use outdoor runs of high quality more regardless of the quality of indoor housing. Applied Animal Behaviour Science 208, 22-30.

For dairy goats in loose housing, access to an outdoor run has potential welfare benefits as it provides additional space, enables spatial separation and may offer items representing behavioural enrichment for the goats (e.g. brush...

Wolfe, A. M., Rahman, M., McFadden, D. G. et al. 2018. Refinement and successful implementation of a scoring system for myxomatosis in a susceptible rabbit (Oryctolagus cuniculus) model. Comparative Medicine 68(4), 280–285.

Myxoma virus is a member of Leporipoxviridae whose tropism is tightly restricted to lagomorphs. In susceptible Oryctolagus rabbits, the virus causes a highly lethal disease known as myxomatosis, which begins as a localized infection but...

Edwards, G. L., Michael, J. A., Parks., A. 2018. Agricultural animals as biomedical models: Occupational health and safety considerations. ILAR Journal 59(2), 161-167.

The use of agricultural animals in biomedical research is increasing. Their overall size and metabolic rate, organ size, longer gestation period, and other physiological similarities make them good candidates for animal models of human disease...

Unakafov, A. M., Möller, S., Kagan, I. et al. 2018. Using imaging photoplethysmography for heart rate estimation in non-human primates. PLOS ONE 13(8), e0202581.

For humans and for non-human primates heart rate is a reliable indicator of an individual’s current physiological state, with applications ranging from health checks to experimental studies of cognitive and emotional state. In humans, changes...

Sommerville, R., Ruiz, R., Averós, X. 2017. A meta-analysis on the effects of the housing environment on the behaviour, mortality, and performance of growing rabbits. Animal Welfare 26(2), 223-238.

Although the number of rabbits (Oryctolagus cuniculus) produced in Europe is important, they are under-represented in welfare research. Studies on the effects of housing conditions have focused on performance and mortality. We conducted a meta-analysis...

Nordquist, R., van der Staay, F., van Eerdenburg, F. et al. 2017. Mutilating procedures, management practices, and housing conditions that may affect the welfare of farm animals: Implications for welfare research. Animals 7(2), 12.

A number of mutilating procedures, such as dehorning in cattle and goats and beak trimming in laying hens, are common in farm animal husbandry systems in an attempt to prevent or solve problems, such as...

Holmes, J., Waters, D., Maisonave, I. et al. 2017. Social interaction for non-sibling pregnant New Zealand white rabbits on reproductive toxicology. Animal Technology and Welfare 16(2), 139-141.

Rabbits are gregarious animals that live in social groups in the wild so individually housing our animals, while meeting the present scientific objectives, restricts their natural social behaviour. How to meet the social needs of...

Zomeño, C., Birolo, M., Zuffellato, A. et al. 2017. Aggressiveness in group-housed rabbit does: Influence of group size and pen characteristics. Applied Animal Behaviour Science 194, 79-85.

The aim of this work was to study how the group size and the number of doorways in a pen may influence the aggressive interactions throughout the reproductive cycle among does kept in a part-time...

Sutherland, M. A., Lowe, G. L., Watson, T. J. et al. 2017. Dairy goats prefer to use different flooring types to perform different behaviours. Applied Animal Behaviour Science 197, 24-31.

Flooring is an important component of indoor housing systems for livestock as it can impact animal hygiene and welfare. Therefore, the aim of this study was to evaluate the lying and elimination preferences of goats...

Li, S.-R., Hao, X., Bi, J.-H. et al. 2017. Why do female desert lizards construct burrows to lay eggs? Behaviour 154(9/10), 1051–1068.

Many oviparous animals construct well-designed nests to provide relatively favourable conditions for their eggs and hatchlings, but the direct evidence that nest structure can determine their reproductive success is insufficient. In the present study, we...

Knapek, K. J., Adams, M. K., Ayers, J. D. 2017. What’s in our chamber of secrets? Python housing in a laboratory setting. Laboratory Animal Science Professional 5(4) (December), 16-19.

At Colorado State University we have an investigator who requested care for 2 different species of pythons, the green tree python (Morelia viridis) and the ball python (Python reguis), to study the pathology of an...

Cornale, P., Macchi, E., Renna, M. et al. 2016. Effect of cage type on fecal corticosterone concentration in buck rabbits during the reproductive cycle. Journal of Applied Animal Welfare Science 19(1), 90-96.

Fecal corticosterone concentration (FCC) was measured in 14 buck rabbits individually housed in standard-dimension cages (SC) or in bigger cages (BC; with a volume more than double that of SC and equipped with a plastic...

Enser, S. 2016. Comparison of housing and welfare of group housed rabbits. Animal Technology and Welfare 15(1), 77-79.

This poster is based on welfare improvements gained from group housing rabbits in floor pens in the new Antibody Production Facility with a focus on development, behaviours and environmental enrichment in both male and female...

O'Keefe, S. 2016. Non-human primate housing facility at Newcastle University. Animal Technology and Welfare 15(2), 131-132.

Monkeys first arrived in the Comparative Biology Centre (CBC) at Newcastle University in 2000. They were housed in three small separate units consisting of steel and wooden cages. In 2011 a decision was made to...

Holmes, A. M., Emmans, C. J., Jones, N. et al. 2016. Impact of tank background on the welfare of the African clawed frog, Xenopus laevis (Daudin). Applied Animal Behaviour Science 185, 131-136.

The captive environment of a laboratory animal can profoundly influence its welfare and the scientific validity of research produced. The African clawed frog (Xenopus laevis) is a common model organism, however current husbandry guidelines lack...

Merrill, C., Ordile, J. 2016. Litter box training of rabbits housed in pens. Laboratory Animal Science Professional 4(1) (March), 44-46.

At Pfizer’s Pearl River site, rabbits are socially housed in pairs or triples in dog runs that have been converted into rabbit pens. The daily husbandry and maintenance of these pens, however, proved to be...

Nordmann, E., Barth, K., Futschik, A. et al. 2015. Head partitions at the feed barrier affect behaviour of goats. Applied Animal Behaviour Science 167, 9-19.

Space allowance at the feeding places often forces goats to feed in close proximity, that is, less than their individual distances. In consequence, agonistic behaviour may increase as well as stress and injuries, while access...

Bayne, K. A., Beaver, B. V., Mench, J. A. et al. 2015. Laboratory animal behavior. In: Laboratory Animal Medicine, 3rd edition. Fox, J. G., Anderson, L., Otto, G., et al. (eds). Elsevier, Inc., Amsterdam, NL. pp. 1617-1651.

The study of laboratory animal behavior has increased steadily over the last decade, with expanding emphasis on a variety of commonly used species. In the United States, this trend was initially focused on species for...