Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Munday, C., Rose, P. 2022. Envirionmental and social influences on the behaviour of free-living mandarin ducks in richmond park. Animals 12(19), 2554.

Many species of birds are housed in zoos globally and are some of the most popular of animals kept under human care. Careful observations of how species live and behave in their natural habitats can...

Lima, A. F., Lima, S. G. C., Nogueira-Filho, S. L. G. et al. 2022. Vocal expression of emotions in farmed spotted paca (Cuniculus paca). Applied Animal Behaviour Science 256, 105753.

Vocal emissions in non-human mammals can be used as non-invasive indicators of animal emotion and welfare. Therefore, we aimed to validate the use of acoustic parameters as indicators of affective states and welfare in farmed...

Kremer, L., van Reenen, C. G., Engel, B. et al. 2022. Developing a feasible and sensitive judgement bias task in dairy cows. Animal Cognition 25(2), 425–445.

Judgement bias tasks (JBTs) are used to assess the influence of farm practices on livestock affective states. The tasks must be adjusted to the species and age group of focus. In cattle, most JBTs were...

Mumm, L. E., Mans, C. 2022. Evaluation of dexmedetomidine-midazolam sedation in budgerigars (Melopsittacus undulatus). Journal of the American Veterinary Medical Association 260(10), 1194–1199.

OBJECTIVE To evaluate the sedative effects of IM administration of a high or low dose of dexmedetomidine in combination with midazolam in budgerigars (Melopsittacus undulatus). ANIMALS 20 healthy adult budgerigars. PROCEDURES In a prospective, randomized...

Gebhardt-Henrich, S. G., Stratmann, A., Stamp Dawkins, M. 2021. Groups and individuals: Optical flow patterns of broiler chicken flocks are correlated with the behavior of individual birds. Animals 11(2), 568.

Group level measures of welfare flocks have been criticized on the grounds that they give only average measures and overlook the welfare of individual animals. However, we here show that the group-level optical flow patterns...

Serres, A., Xu, C., Hao, Y. et al. 2021. The click production of captive Yangtze finless porpoises (Neophocaena asiaeorientalis asiaorientalis) is influenced by social and environmental factors. Animals 11(2), 511.

Yangtze finless porpoises use high-frequency clicks to navigate, forage, and communicate. The way in which click production may vary depending on social or environmental context has never been investigated. A group of five captive Yangtze...

Casey, K. M., Gore, F., Vilches-Moure, J. G. et al. 2021. Management of morbidity and mortality in a New Zealand white rabbit model of steroidinduced osteonecrosis of the femoral head. Comparative Medicine 71(1), 86-98.

Steroid-induced osteonecrosis of the femoral head (SONFH) is a condition documented in humans and animals exposed to chronic steroid administration. The rabbit has become a preferred animal model for investigating the pathogenesis and treatment of...

Stracke, J., Volkmann, N., May, F. et al. 2021. Walking on tiptoes: Digital pads deserve increased attention when scoring footpad dermatitis as an animal welfare indicator in turkeys. Frontiers in Veterinary Science 7, 613516.

Animal welfare is one of the most challenging issues in modern farm animal husbandry. Animal welfare indicators can be used to monitor welfare on farms or at slaughterhouses, with footpad dermatitis (FPD) being one of...

Stygar, A. H., Gómez, Y., Berteselli, G. V. et al. 2021. A systematic review on commercially available and validated sensor technologies for welfare assessment of dairy cattle. Frontiers in Veterinary Science 8, 634338.

In order to base welfare assessment of dairy cattle on real-time measurement, integration of valid and reliable precision livestock farming (PLF) technologies is needed. The aim of this study was to provide a systematic overview...

Neave, H. W., Webster, J. R., Zobel, G. 2021. Anticipatory behaviour as an indicator of the welfare of dairy calves in different housing environments. PLOS ONE 16(1), e0245742.

Anticipatory behaviour occurs in the period before a reward or other positive event is presented and has been interpreted as an indicator of the welfare and emotional state of animals. The use of this indicator...

Tahamtani, F. M., Herskin, M. S., Foldager, L. et al. 2021. Assessment of mobility and pain in broiler chickens with identifiable gait defects. Applied Animal Behaviour Science 234, 105183.

Gait defects, assessed as gait score (GS), is a common welfare problem in broiler chicken production. The aim of this study was to examine whether birds with GS2 experience pain and poor locomotor ability compared...

Lowe, G. L., Sutherland, M. A., Waas, J. R. et al. 2021. Effect of milk allowance on the suitability of automated behavioural and physiological measures as early disease indicators in calves. Applied Animal Behaviour Science 234, 105202.

This study investigated the effect of milk allowance on the suitability of behavioural and physiological responses, individually and in combination, as early disease indicators. A total of 120 heifer calves were assigned into a 5...

Uenishi, S., Oishi, K., Kojima, T. et al. 2021. A novel accelerometry approach combining information on classified behaviors and quantified physical activity for assessing health status of cattle: A preliminary study. Applied Animal Behaviour Science 235, 105220.

Evaluation of animal behavior provides information on health and well-being in animals. In this preliminary study, we investigated the effectiveness of an accelerometry approach to evaluate changes in health status of cattle by combining physical...

Yamada, P. H., Codognoto, V. M., Rydygier de Ruediger, F. et al. 2021. Pain assessment based on facial expression of bulls during castration. Applied Animal Behaviour Science 236, 105258.

Bovine castration can be performed surgically, chemically, or immunologically and the method used can influence animal welfare. The use of facial expressions is an efficient tool to quantify pain, but there has been limited study...

Salzer, Y., Honig, H. H., Shaked, R. et al. 2021. Towards on-site automatic detection of noxious events in dairy cows. Applied Animal Behaviour Science 236, 105260.

Successful detection of pain in cows could circumscribe the therapeutic window for treatment before the cow's condition deteriorates further. While severe clinical cases that are characterized as painful have clear behavioral and physiological manifestations, mild...

Laurijs, K. A., Briefer, E. F., Reimert, I. et al. 2021. Vocalisations in farm animals: A step towards positive welfare assessment. Applied Animal Behaviour Science 236, 105264.

Public concern for farm animal welfare is increasing. Animal welfare is defined as the balance of positive and negative emotions, where positive emotions are key to a good animal life. Emotion is defined as an...

Coleman, K., Shapiro, S. J. (Eds.). 2021. Behavioral Biology of Laboratory Animals (1st ed). CRC Press, Boca Raton, FL.

This 30-chapter volume informs students and professionals about the behavioral biology of animals commonly housed in laboratory and other captive settings. Each species evolved under specific environmental conditions, resulting in unique behavioral patterns, many of...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

van Eerdenburg, F. J. C. M., Di Giacinto, A. M., Hulsen, J. et al. 2021. A new, practical animal welfare assessment for dairy farmers. Animals 11(3), 881.

The Welfare Quality® assessment protocol (WQ) is the most extensive way to measure animal welfare. This study was set up to determine if resource-based welfare indicators, that are easier and faster to measure, could replace...

Herlin, A., Brunberg, E., Hultgren, J. et al. 2021. Animal welfare implications of digital tools for monitoring and management of cattle and sheep on pasture. Animals 11(3), 829.

The opportunities for natural animal behaviours in pastures imply animal welfare benefits. Nevertheless, monitoring the animals can be challenging. The use of sensors, cameras, positioning equipment and unmanned aerial vehicles in large pastures has the...

van Eerdenburg, F. J. C. M., Hof, T., Doeve, B. et al. 2021. The relation between hair-cortisol concentration and various welfare assessments of Dutch dairy farms. Animals 11(3), 821.

Many protocols have been developed to assess farm animal welfare. However, the validity of these protocols is still subject to debate. The present study aimed to compare nine welfare assessment protocols, namely: (1) Welfare Quality©...

Tschoner, T. 2021. Methods for pain assessment in calves and their use for the evaluation of pain during different procedures—A review. Animals 11(5), 1235.

The evaluation and assessment of the level of pain calves are experiencing is important, as the experience of pain (e.g., due to routine husbandry procedures) severely affects the welfare of calves. Studies about the recognition...

Steagall, P. V., Bustamante, H., Johnson, C. B. et al. 2021. Pain management in farm animals: Focus on cattle, sheep and pigs. Animals 11(6), 1483.

Pain causes behavioral, autonomic, and neuroendocrine changes and is a common cause of animal welfare compromise in farm animals. Current societal and ethical concerns demand better agricultural practices and improved welfare for food animals. These...

Manthey, T., Nagel-Riedasch, S., Dülsner, A. 2021. The interactive stress assessment in basic animal science training. Animals 11(7), 2145.

In order to assess the extent to which the legally prescribed training for the acquisition of animal experimentation expertise provides scientific personnel with the necessary competence and expertise to carry out a correct harm-benefit analysis...

Huettner, T., Dollhaeupl, S., Simon, R. et al. 2021. Activity budget comparisons using long-term observations of a group of bottlenose dolphins (Tursiops truncatus) under human care: Implications for animal welfare. Animals 11(7), 2107.

Zoos and aquaria must provide optimal husbandry conditions and the highest welfare standards for their animals. How the welfare state of an animal or a group of animals can be precisely assessed is currently under...