Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Kaiser, S., Korte, A., Wistuba, J. et al. 2023. Effects of castration and sterilization on baseline and response levels of cortisol—A case study in male guinea pigs. Frontiers in Veterinary Science 9, 1093157.

An uncontrolled reproduction of animals in human hands should be avoided. To meet this goal, animals are widely castrated, i.e., the gonads are completely removed. Since the gonads are the most important source of sex...

Machado, M., Freitas Silveira, R. M., Machado Bittar, C. M. et al. 2023. Can the emotional state of calves be noticed by their facial expression and heart rate? Applied Animal Behaviour Science 260, 105874.

The aim of this study was to identify whether or not dairy calves change their facial expression and heart rate according to their emotional state when subjected to a stroking or umbrella stimulus. Thirty-two mixed-breed...

Alizadeh, E. A., Graf, K., Schiwon, J. et al. 2023. Thirty years of telemetry-based data acquisition for cardiovascular drug safety evaluation: Applications and optimization. Journal of Pharmacological and Toxicological Methods 122, 107279.

Conducting safety evaluations of new drugs using conscious animals has been a specialty of our working group for thirty years. In this article, we review the various technical challenges and solutions dealt with over the...

Hube, D., van Meegen, C., Herbrandt, S. et al. 2023. Hair corticosterone concentration as a potential stress marker in pet rabbits. Veterinary Record 193(9), e3464.

Background As a prey species, rabbits tend to hide their illnesses and injuries. Consequently, pet rabbit owners often do not notice that their pet may be suffering. Methods Data on the housing and health of...

Edes, A. N., Zimmerman, D., Jourdan, B. et al. 2022. Value ranges and clinical comparisons of serum DHEA-S, IL-6, and TNF-α in western lowland gorillas. Animals 12(19), 2705.

Physiological data can provide valuable information about the health and welfare of animals. Unfortunately, few validated assays and a lack of information on species-typical levels of circulating biomarkers for wildlife make the measurement, interpretation, and...

Chmurska-Gąsowska, M., Sowińska, N., Pałka, S. et al. 2021. Non-invasive measurement of thyroid hormones in domestic rabbits. Animals 11(5), 1194.

Thyroid hormones are essential for metabolism, energy homeostasis and reproduction. Hormones can be measured in various biological source materials: blood, feces, urine, saliva and others. The aim of our study was to verify usefulness of...

Edes, A. N., Brand, C. M. 2021. Age, sex, and inflammatory markers predict chronic conditions, cardiac disease, and mortality among captive western lowland gorillas (Gorilla gorilla gorilla). Primates 62(6), 931-943.

In humans, inflammatory markers predict health risks. As great apes experience many similar conditions, measuring inflammation may provide valuable health information. We examined four serum inflammatory markers in zoo-housed gorillas (n = 48): albumin, CRP, IL-6, and...

Boers, K. L., Allender, M. C., Novak, L. J. et al. 2020. Assessment of hematologic and corticosterone response in free-living eastern box turtles (Terrapene carolina carolina) at capture and after handling. Zoo Biology 39(1), 13-22.

Hematology is a common tool for wildlife health assessments. Manual leukocyte counts are required in reptiles, however, disagreement between quantification methods has been observed in some chelonians. This study determined agreement between two methods of...

Cloutier Barbour, C., Danforth, M. D., Murphy, H. et al. 2020. Monitoring great ape heart health through innovative electrocardiogram technology: Training methodologies and welfare implications. Zoo Biology 39(6), 443-447.

Assessing and treating cardiovascular disease (or heart disease) is a growing concern for institutions housing great apes, as it is a major cause of mortality in all four taxa managed in human care. As part...

Van der Saag, D., Lomax, S., Windsor, P. A. et al. 2019. Effect of lignocaine and a topical vapocoolant spray on pain response during surgical castration of beef calves. Animals 9(4), 126.

This study assessed the efficacy of pre-operative injected lignocaine and peri-operative topical vapocoolant spray, administered as most practical for incorporation into routine calf castration procedures. Calves were randomly allocated to: (1) sham castration (SHAM); (2)...

Larrondo, C., Bustamante, H., Paredes, E. et al. 2019. Long-term hyperalgesia and traumatic neuroma formation in tail-docked lambs. Animal Welfare 28(4), 443-454.

This study aimed to determine if tail-docking induces long-term hyperalgesia, chronic pain and histopathological changes in tail stumps of tail-docked lambs. Fifty male lambs of 45 days of age were randomly allocated in two groups...

Barreiro-Vázquez, J. D., Miranda, M., Barreiro-Vilanova, M. I. et al. 2019. Characterization of the normal portal and hepatic blood flow of adult Holstein-Friesian cows. Animals 9(6), 386.

Knowledge of physiological portal and hepatic blood flow in cattle is essential for the use of Doppler ultrasound for diagnostic purposes. In this paper, we describe a protocol for the systematic ultrasonography evaluation of the...

Lowe, G., Sutherland, M., Waas, J. et al. 2019. Infrared thermography—A non-invasive method of measuring respiration rate in calves. Animals 9(8), 535.

Respiration rate (RR) is commonly used to assess states of cattle health and welfare such as pain, stress and disease. Traditionally, RR is measured by counting flank movements, a method often considered to be labour-intensive...

Lutz, J., Burla, J.-B., Gygax, L. et al. 2019. Horned and dehorned dairy cows differ in the pattern of agonistic interactions investigated under different space allowances. Applied Animal Behaviour Science 218, 104819.

Limited space in dairy cattle farming is associated with frequent encounters between cows, often resulting in agonistic interactions and injuries, especially in horned cows. Previous studies with dairy cows investigated space allowances in the waiting...

Ede, T., von Keyserlingk, M. A. G., Weary, D. M. 2019. Assessing the affective component of pain, and the efficacy of pain control, using conditioned place aversion in calves. Biology Letters 15(10), 20190642.

Pain in animals is typically assessed using reflexive and physiological responses. These measures allow inferences regarding nociception but provide little basis for conclusions about the affective component of pain (i.e. how negatively the experience is...

Marti, S., Meléndez, D. M., Pajor, E. A. et al. 2019. Effect of a single dose of subcutaneous meloxicam before knife castration alone or combined with hot-iron branding on scrotal healing, inflammatory response, and behaviour in 2-mo-old beef calves over 42 d post procedure. Canadian Journal of Animal Science 99(1), 179-190.

The objective of this study was to evaluate the effect of a single subcutaneous injection of meloxicam on scrotal healing, inflammatory response, and behaviour in castrated or castrated and branded beef calves for 42 d...

Van der Saag, D., Lomax, S., Windsor, P. A. et al. 2018. Evaluating treatments with topical anaesthetic and buccal meloxicam for pain and inflammation caused by amputation dehorning of calves. PLOS ONE 13(6), e0198808.

To assess the effects of a topical anaesthetic (TA) and buccal meloxicam (BM) on behaviour, maximum wound temperature and wound morphology following amputation dehorning of beef calves, 50 unweaned Hereford calves were randomly allocated to...

Van der Saag, D., White, P., Ingram, L. et al. 2018. Effects of topical anaesthetic and buccal meloxicam treatments on concurrent castration and dehorning of beef calves. Animals 8(3), 35.

The use of pain relief during castration and dehorning of calves on commercial beef operations can be limited by constraints associated with the delivery of analgesic agents. As topical anaesthetic (TA) and buccal meloxicam (MEL)...

Baker, S., Knight, E., Pellett, S. et al. 2018. Spider and chips: The use of internal Radio Frequency Identification (RFID) chips as a minimally invasive method to measure internal body temperatures in invertebrates. Animal Technology and Welfare 17(1), 1-7.

Internal RFID transponders have been used in vertebrates for many years, however studies into their use in invertebrates are less well represented in the literature. The use of RFID transponders for internal temperature measurement represents...

Cannas, S., Palestrini, C., Canali, E. et al. 2018. Thermography as a non-invasive measure of stress and fear of humans in sheep. Animals 8(9), 146.

No data have been published on the use of infrared thermography (IRT) to evaluate sheep emotions. We assessed whether this technique can be used as a non-invasive measure of negative emotions. Two voluntary animal approach...

Hempstead, M. N., Waas, J. R., Stewart, M. et al. 2018. Evaluation of alternatives to cautery disbudding of dairy goat kids using behavioural measures of post-treatment pain. Applied Animal Behaviour Science 206, 32-38.

Alternatives to cautery disbudding (caustic paste and cryosurgical disbudding, and clove oil injection) were evaluated using behavioural measures of post-treatment pain in dairy goat kids. Fifty Saanen doe kids were randomly assigned to one of...

Fuller, G., Allard, S. 2018. Preliminary data showing potential for salivary C-reactive protein as an indicator of welfare in western lowland gorillas (Gorilla gorilla gorilla). Journal of Veterinary Behavior 28, 58-62.

C-reactive protein (CRP) is an acute phase protein often used as a biomarker for inflammation related to acute trauma or chronic illness. Animal studies showing elevations in CRP following events such as road transport and...

Unakafov, A. M., Möller, S., Kagan, I. et al. 2018. Using imaging photoplethysmography for heart rate estimation in non-human primates. PLOS ONE 13(8), e0202581.

For humans and for non-human primates heart rate is a reliable indicator of an individual’s current physiological state, with applications ranging from health checks to experimental studies of cognitive and emotional state. In humans, changes...

Nordquist, R., van der Staay, F., van Eerdenburg, F. et al. 2017. Mutilating procedures, management practices, and housing conditions that may affect the welfare of farm animals: Implications for welfare research. Animals 7(2), 12.

A number of mutilating procedures, such as dehorning in cattle and goats and beak trimming in laying hens, are common in farm animal husbandry systems in an attempt to prevent or solve problems, such as...

McCarthy, D., Windsor, P. A., Harris, C. et al. 2016. Effect of topically applied anaesthetic formulation on the sensitivity of scoop dehorning wounds in calves. PLOS ONE 11(9), e0163181.

The post-operative effects of three formulations of topical anaesthetic and a cornual nerve block on the sensitivity of scoop dehorning wounds in calves were compared in two trials. In Trial 1, 21 female Holstein dairy...