Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Barreiro-Vázquez, J. D., Miranda, M., Barreiro-Vilanova, M. I. et al. 2019. Characterization of the normal portal and hepatic blood flow of adult Holstein-Friesian cows. Animals 9(6), 386.

Knowledge of physiological portal and hepatic blood flow in cattle is essential for the use of Doppler ultrasound for diagnostic purposes. In this paper, we describe a protocol for the systematic ultrasonography evaluation of the...

Larsen, M. L. V., Pedersen, L. J., Jensen, D. B. 2019. Prediction of tail biting events in finisher pigs from automatically recorded sensor data. Animals 9(7), 458.

Tail biting in pigs is an animal welfare problem, and tail biting should be prevented from developing into tail damage. One strategy could be to predict events of tail biting so that the farmer can...

Portele, K., Scheck, K., Siegmann, S. et al. 2019. Sow-piglet nose contacts in free-farrowing pens. Animals 9(8), 513.

Nose contact is a frequent form of social behaviour in pigs, but the motivational reasons underlying this behaviour remain unclear. We investigated the frequency, direction and type of sow–piglet nosing behaviour and its association with...

Lowe, G., Sutherland, M., Waas, J. et al. 2019. Infrared thermography—A non-invasive method of measuring respiration rate in calves. Animals 9(8), 535.

Respiration rate (RR) is commonly used to assess states of cattle health and welfare such as pain, stress and disease. Traditionally, RR is measured by counting flank movements, a method often considered to be labour-intensive...

Chou, J.-Y., O'Driscoll, K., D'Eath, R. B. et al. 2019. Multi-step tail biting outbreak intervention protocols for pigs housed on slatted floors. Animals 9(8), 582.

Solutions are needed to keep pigs under commercial conditions without tail biting outbreaks (TBOs). However, as TBOs are inevitable, even in well managed farms, it is crucial to know how to manage TBOs when they...

Wallgren, T., Lundeheim, N., Wallenbeck, A. et al. 2019. Rearing pigs with intact tails—Experiences and practical solutions in Sweden. Animals 9(10), 812.

Tail biting is a common issue within commercial pig production. It is mainly an indicator of inadequate housing environment and results in reduced health welfare and production. To reduce the impact of tail biting, pigs...

Buijs, S., Muns, R. 2019. A review of the effects of non-straw enrichment on tail biting in pigs. Animals 9(10), 824.

Tail biting remains a common problem in pig production. As producers are reluctant to use straw to reduce this behaviour, we review studies on the effectiveness of other types of enrichment. Roughage, hessian sacks, compost...

Raillard, M., Detotto, C., Grepper, S. et al. 2019. Anaesthetic and perioperative management of 14 male New Zealand white rabbits for calvarial bone surgery. Animals 9(11), 896.

Calvarial bone surgery on rabbits is frequently performed. This report aims to document a simple and practical anaesthetic and perioperative management for this procedure. Fourteen male New Zealand white rabbits were included in the study...

Gentz, M., Lange, A., Zeidler, S. et al. 2019. Classification of pigs with tail lesions from different farrowing and rearing systems during rearing and fattening period. Animals 9(11), 949.

The aim of the present study was to classify and characterise pigs with tail lesions using a combined parameter based on the frequency and duration of tail lesions and to find out whether biologically relevant...

Krall, C., Glass, S., Dancourt, G. et al. 2019. Behavioural anxiety predisposes rabbits to intra-operative apnoea and cardiorespiratory instability. Applied Animal Behaviour Science 221, 104875.

Rabbits are prone to complications from both anaesthesia and anxiety. Given that anxiety can often impact quality of anaesthesia, we developed a novel cage-side anxiety assessment, and sought to determine whether it correlated to pre-...

Moser, J., Burla, J.-B., Gygax, L. 2019. Executing specific foraging behaviours does not represent a general goal state of foraging in dry sows (Sus scrofa). Behavioural Processes 164, 115-122.

Intensively housed domestic pigs (Sus scrofa) have little opportunity to perform diverse foraging behaviour though they still seem strongly motivated to do so. Here, we investigated whether the execution of specific behaviours may in itself...

Animal Welfare Institute. 2019. Let’s get serious about animal play. AWI Quarterly 68(3) Fall, 19.

This article describes the importance of providing laboratory animals with opportunities to engage in play, and provides a few practical ideas for how to do this.

Musk, G. C., Kershaw, H., He, B. 2019. Multiple refinements to the anaesthetic protocol for laparoscopic orthotopic kidney auto-transplantation in a pig model. Laboratory Animals 53(1), 72–78.

Fifty-four pigs (Sus scrofa, Large White cross) from a commercial pig farm were anaesthetised over a six-year period from October 2011. The procedural stages included initial instrumentation for intra-operative monitoring, laparoscopic nephrectomy, preparation of the...

Boileau, A., Farish, M., Turner, S. P. et al. 2019. Infrared thermography of agonistic behaviour in pigs. Physiology & Behavior 210, 112637.

Infrared thermography (IRT) or thermal imaging is increasingly being used as a non-invasive method to gain information on animals' physiological and emotional state. IRT has the potential to serve as a non-invasive quantitative assessment method...

Green, A., Clark, C., Favaro, L. et al. 2019. Vocal individuality of Holstein-Friesian cattle is maintained across putatively positive and negative farming contexts. Scientific Reports 9, 18468.

Cattle mother-offspring contact calls encode individual-identity information; however, it is unknown whether cattle are able to maintain individuality when vocalising to familiar conspecifics over other positively and negatively valenced farming contexts. Accordingly, we recorded 333...

Jorquera-Chavez, M., Fuentes, S., Dunshea, F. et al. 2019. Modelling and validation of computer vision techniques to assess heart rate, eye temperature, ear-base temperature and respiration rate in cattle. Animals 9(12), 1089.

Precision livestock farming has emerged with the aim of providing detailed information to detect and reduce problems related to animal management. This study aimed to develop and validate computer vision techniques to track required features...

Geerah, D. R., O’Hagan, R. P., Wirdateti, W. et al. 2019. The use of ultrasonic communication to maintain social cohesion in the Javan slow loris (Nycticebus javanicus). Folia Primatologica 90(5), 392–403.

Only a handful of primate taxa use ultrasonic vocalisations (those ≥20 kHz) to communicate. The extent and uses of ultrasonic communication remain poorly understood, potentially ranging from echolocation, advertisement of reproductive status and resource availability...

Weller, J. E., Camerlink, I., Turner, S. P. et al. 2019. Playful pigs: Early life play-fighting experience influences later life contest dynamics. Animal Behaviour 158, 269-279.

Animal contests are costly and predicted to be won by the individual with the higher resource-holding potential (RHP). Weight is often used a proxy for RHP; however, victory does not always go to the heaviest...

Carvalho, C. da C. S., Cordeiro de Souza, A., Ferreira, H. C. et al. 2019. Using infrared thermography to measure the body surface temperature of crossbred cows and calves in the semi-arid region of Minas Gerais, Brazil. Journal of Animal Behaviour and Biometeorology 7(3), 132-136.

This study aimed to evaluate the body surface temperature of crossbreed cows and calves managed in the semi-arid region of Minas Gerais (Brazil), using the infrared thermography technique. The thermal environment was characterized by daily...

Špinka, M. 2019. Animal agency, animal awareness and animal welfare. Animal Welfare 28(1), 11–20.

In nature, animals need to actively engage with the environment in order to prosper in survival and reproduction. Hence, agency is a central adaptive characteristic of animal life. In this paper, I propose that from...

Kallio, P. A, Janczak, A. M., Valros, A. E. et al. 2018. Case control study on environmental, nutritional and management-based risk factors for tail-biting in long-tailed pigs. Animal Welfare 27(1), 21-34.

A case control study with a questionnaire was carried out to compare feeding practices, diet composition, housing and management in 78 herds with or without a history of tail-biting in undocked pigs (Sus scrofa) in...

Volkmann, N., Kemper, N. 2018. Claw condition and claw health in dairy cows: how important is access to pasture? Veterinary Record 182(3), 76-78.

Housing cows on hard flooring is associated with increased claw disorders. Pasture access shows a positive effect on claw health, particularly for diseases that are related to moist environments (eg, digital dermatitis). Regular documentation of...

Armbrecht, L., Lambertz, C., Albers, D. et al. 2018. Does access to pasture affect claw condition and health in dairy cows? Veterinary Record 182(3), 79.

The aim of this study was to examine effects of pasturing in dairy cows on claw condition (claw length, hardness) and on the prevalence of claw diseases. At claw trimming, a total of 240 Holstein-Friesian...

Costa, R., Sousa, C., Llorente, M. 2018. Assessment of environmental enrichment for different primate species under low budget: A case study. Journal of Applied Animal Welfare Science 21(2), 185-199.

The 2011 European Union Zoo Inquiry presented evidence that most zoos fail to achieve adequate levels of nonhuman animal welfare. Appropriate environmental enrichment (EE) can play a role in the promotion of welfare. However, financial...

Verdon, M., Rawnsley, R., Raedts, P. et al. 2018. The behaviour and productivity of mid-lactation dairy cows provided daily pasture allowance over 2 or 7 intensively grazed strips. Animals 8(7), 115.

Research into the effects of intense grazing regimes on cattle behaviour and productivity will support the ethical intensification of pastoral dairy production. Two treatments were applied to two herds of 30 mid-lactation cows over 28...