Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Chaumont, S., Freitas-de-Melo, A., Pinto-Santini, L., Menant, O. et al. 2021. Rams recognize and prefer the human who regularly brushed them. Applied Animal Behaviour Science 236, 105250.

Brushing produces a relaxing effect and improves the welfare of ewes and lambs and the human-animal relationship. Lambs gently handled during rearing are less fearful to humans in their adulthood, but there are few studies...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Fife-Cook, I., Franks, B. 2021. Koi (Cyprinus rubrofuscus) seek out tactile interaction with humans: General patterns and individual differences. Animals 11(3), 706.

The study of human–animal interactions has provided insights into the welfare of many species. To date, however, research has largely focused on human relationships with captive mammals, with relatively little exploration of interactions between humans...

Rácz, A., Allan, B., Dwyer, T. et al. 2021. Identification of individual zebrafish (Danio rerio): A refined protocol for VIE tagging whilst considering animal welfare and the principles of the 3Rs. Animals 11(3), 616.

In aquatic ecology, studies have commonly employed a tagging technique known as visible implant elastomer (VIE). This method has not been widely adopted by the zebrafish research community and also lacks refinement with regard to...

Nagasawa, T., Ohta, M., Uchiyama, H. 2021. The urinary hormonal state of cats associated with social interaction with humans. Frontiers in Veterinary Science 8, 680843.

Research to assess the relationship between cats and humans is in a nascent stage. Some studies have assessed the stress status in cats using physiological indicators, such as the cortisol hormone, but have not focused...

Deputte, B. L., Jumelet, E., Gilbert, C. et al. 2021. Heads and tails: An analysis of visual signals in cats, Felis catus. Animals 11(9), 2752.

Visual communication involves specific signals. These include the different positions of mobile body elements. We analyzed visual configurations in cats that involve ears and the tail. We aimed at deciphering which features of these configurations...

Camargo-dos-Santos, B., Carlos, C. L., Favero-Neto, J. et al. 2021. Welfare in Nile tilapia production: Dorsal fin erection as a visual indicator for insensibility. Animals 11(10), 3007.

In aquaculture, to ensure animal welfare in pre-slaughter and slaughter stages, it is fundamental that fish are insensible. A method for evaluating fish insensibility is based on visual sensibility indicators (VSI) assessment (i.e., self-initiated behavior...

Van Hooser, J. P., Pekow, C., Nguyen, H. M. et al. 2021. Caring for the animal caregiver—Occupational health, human-animal bond and compassion fatigue. Frontiers in Veterinary Science 8, 731003.

Laboratory Animal Professionals experience many positive and rewarding interactions when caring for and working with research animals. However, these professionals also may experience conflicting feelings and exhaustion when the work is stressful due to factors...

Fusco, A., Douglas, H., Barba, A. et al. 2021. V-Gel® guided endotracheal intubation in rabbits. Frontiers in Veterinary Science 8, 684624.

Background: General anesthesia in rabbits is associated with higher morbidity and mortality relative to other mammalian species commonly anesthetized. Unique challenges related to endotracheal intubation (ETI) in rabbits contribute to this risk. Objective: To improve...

Bruce, H., Brennan, M. 2021. Does using an endotracheal tube or a supraglottic airway device result in better unassisted ventilation in rabbits? Veterinary Record 189(7), 289-290.

Both endotracheal tubes and supraglottic airway devices appear to provide adequate unassisted ventilation in anaesthetised rabbits. However, it is highly recommended that a capnograph is used with both airway devices to monitor ventilation changes, especially...

O’Malley, M., Woods, J. M., Byrant, J. et al. 2021. How is Western lowland gorilla (Gorilla gorilla gorilla) behavior and physiology impacted by 360 degree visitor viewing access? Animal Behavior and Cognition 8(4), 468–480.

The effect visitors may have on the welfare of professionally managed animals is vital to consider. The present study utilized an experimental approach to examine how 360° visitor viewing access (i.e., viewing from all sides...

Gades, N. M., Thompson, K. L., Mi, L. et al. 2020. Impact of euthanasia on compassion fatigue in personnel working in animal research. Laboratory Animal Science Professional 8(1) (January/February), 22-23.

We conducted a cross-sectional study to investigate the association between euthanasia and compassion fatigue among employees working in animal research at a large academic medical center. In summary, animal research workers who euthanize animals reported...

Andreasen, S. N., Sandøe, P., Waiblinger, S. et al. 2020. Negative attitudes of Danish dairy farmers to their livestock correlates negatively with animal welfare. Animal Welfare 29(1), 89-98.

Positive stockperson attitudes to his or her animals is associated with a positive behavioural response in the animals and in other indicators assumed to reflect a high level of welfare as well as increased productivity...

Burn, C. C., Raffle, J., Bizley, J. K. 2020. Does 'playtime' reduce stimulus-seeking and other boredom-like behaviour in laboratory ferrets? Animal Welfare 29(1), 19-26.

Much environmental enrichment for laboratory animals is intended to enhance animal welfare and normalcy by providing stimulation to reduce 'boredom'. Behavioural manifestations of boredom include restless sensation-seeking behaviours combined with indicators of sub-optimal arousal. Here...

Leeds, A., Good, J., Schook, M. W. et al. 2020. Evaluating changes in salivary oxytocin and cortisol following positive reinforcement training in two adult male western lowland gorillas (Gorilla gorilla gorilla). Zoo Biology 39(1), 51-55.

Positive reinforcement training (PRT) is associated with increases in species-typical behavior and decreases in stereotypic and abnormal behavior in participating animals. Physiological changes following PRT, for example, increases in oxytocin (OXT) and/or decreases in cortisol...

Hanzen, C., Lucas, M. C., OʼBrien, G. et al. 2020. Surgical implantation of radio tags in three eel species (Anguilla spp.) in South Africa. Journal of Fish Biology 96(3), 847-852.

Studies have reported poor survival of surgically tagged freshwater fishes in warm African waters. This study aimed to assess the applicability of using radio telemetry (and surgical implantation of tags) for Anguilla spp. Nineteen yellow...

Keeping, J. A., Reeve‐Arnold, K. E., Burns, N. M. et al. 2020. Computer‐aided photo‐identification of a rare stingray, Megatrygon microps. Journal of Fish Biology 96(3), 815-819.

A protocol for photo‐identification of individual Megatrygon microps has been defined. One hundred and four identification photographs were taken between 2005 and 2019. Spot patterns on the dorsal surface were used to identify individuals. Unique...

Skov, C., Hansen, J. H., Baktoft, H. et al. 2020. A field evaluation of long‐term effects of PIT tagging. Journal of Fish Biology 96(4), 1055-1059.

Passive integrated transponder (PIT)‐tagging is commonly used in behavioural studies of fish, although long‐term evaluations of effects from tagging under natural conditions are scarce. We PIT‐tagged common bream Abramis brama, European perch Perca fluviatilis, pike...

Young, T., Whiteside, T., Locklear, J. 2020. What is your tattoo ink telling you? Laboratory Animal Science Professional 8(2) (March/April), 62-65.

Tattooing traumatizes the skin, which can result in microbial infections with the severity ranging from minor to life-threating septicemia. Additionally, the metals in colored tattoo ink are known to cause dermal inflammation in some people...

Zemanova, M. A. 2020. Towards more compassionate wildlife research through the 3Rs principles: Moving from invasive to noninvasive methods. Wildlife Biology 2020(1), no page numbers.

Research in ecology and wildlife biology remains crucial for increasing our knowledge and improving species management and conservation in the midst of the current biodiversity crisis. However, obtaining information on population status often involves invasive...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

Kennedy, R. J., Evans, D., Allen, M. 2020. Long-term retention of dummy acoustic transmitters in adult brown trout. Journal of Fish Biology 97(4), 1281–1284.

A group of 36 1+ age class Salmo trutta were surgically implanted with dummy acoustic tags and monitored for 370 days. In total 13 tags were expelled throughout the experiment with an overall tag loss...

Lewis, R., Dawson, S., Rayment, W. 2020. Estimating population parameters of broadnose sevengill sharks (Notorynchus cepedianus) using photo identification capture-recapture. Fish Biology 97(4), 987–995.

Capture-recapture methods are now widely used for quantifying abundance and movements of elasmobranchs. This method requires that individuals in the population are uniquely identifiable and has been employed in studies that use baited underwater video...

Humphrey, T., Proops, L., Forman, J. et al. 2020. The role of cat eye narrowing movements in cat-human communication. Scientific Reports 10(1), 16503.

Domestic animals are sensitive to human cues that facilitate inter-specific communication, including cues to emotional state. The eyes are important in signalling emotions, with the act of narrowing the eyes appearing to be associated with...

Liu, S., Paterson, M., Camarri, S. et al. 2020. The effects of the frequency and method of gentling on the behavior of cats in shelters. Journal of Veterinary Behavior 39, 47-56.

Gentling of cats in a shelter has been shown to increase contented behaviors and reduce anxiety, but it is not clear how gentling should be provided. Two experiments were conducted in cats confined to cages...