Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Franks, B., Graham, C., Von Keyserlingk, M. A. G. 2018. Is heightened-shoaling a good candidate for positive emotional behavior in zebrafish? Animals 8(9), 152.

Zebrafish, a highly-social species of freshwater fish, are widely studied across many fields of laboratory science including developmental biology, neuroscience, and genomics. Nevertheless, as standard housing for zebrafish typically consists of small and simplistic environments...

Campler, M. R., Jensen, M. B., Munksgaard, L. 2018. The effect of deep straw versus cubicle housing on behaviour during the dry period in Holstein cows. Applied Animal Behaviour Science 209, 1-7.

The present observational study assessed the effect of deep straw bedding compared to cubicles during the dry period on lying-, feeding- and agonistic behaviour in Holstein cows. A total of 74 primi- (heifers) and multiparous...

Lopes, A. C. C., Villacorta-Correa, M. A., Carvalho, T. B. 2018. Lower light intensity reduces larval aggression in matrinxã, Brycon amazonicus. Behavioural Processes 151, 62-66.

Brycon amazonicus shows a high frequency of aggressive behavior, which can be a limiting factor in intensive farming systems. Environmental changes can modulate the social interactions of fish and reduce aggression during the different stages...

Christensen, E. A. F., Grosell, M. 2018. Behavioural salinity preference of juvenile yellow perch Perca flavescens. Journal of Fish Biology 92(5), 1620-1626.

The present study determined the behavioural salinity preference of a freshwater stock of juvenile yellow perch Perca flavescens acclimated to salinities of 0 and 10. The preferred salinities ranged between 7.3 and 13.0 (mean ±...

Fenkes, M., Shiels, H. A., Nudds, R. L. 2018. Body shape and robustness response to water flow during development of brown trout Salmo trutta parr. Journal of Fish Biology 93(2), 360-369.

Domesticated brown trout Salmo trutta parr were subjected to increased, variable flow under controlled experimental conditions. Using geometric morphometric analyses, (a mass:length index) and caudal fin area:body length ratio, this study assessed morphological responses in...

Darbyshire, A. K., Salleng, K., Chen,P. 2018. The shocking lives of electric eels. Laboratory Animal Science Professional 6(1) (March), 14-18.

Electric eels (Electrophorus electricus) are a unique species used for behavioral research in the Vanderbilt Animal Care and Use Program. Few resources are available to describe the housing and handling of this species in captivity...

Wilson, L. A., Miller, J. J., Work, R. K. et al. 2018. Novel diet regimen for rabbits in a compromised oral wound healing study. Laboratory Animal Science Professional 6(1) (March), 49-51.

Rabbits are known to be finicky about food and will reject it based upon several factors: odor, texture, form, or method of presentation. It can be an even greater challenge to get rabbits to eat...

Sommerville, R., Ruiz, R., Averós, X. 2017. A meta-analysis on the effects of the housing environment on the behaviour, mortality, and performance of growing rabbits. Animal Welfare 26(2), 223-238.

Although the number of rabbits (Oryctolagus cuniculus) produced in Europe is important, they are under-represented in welfare research. Studies on the effects of housing conditions have focused on performance and mortality. We conducted a meta-analysis...

Tsang, B., Zahid, H., Ansari, R. et al. 2017. Breeding zebrafish: A review of different methods and a discussion on standardization. Zebrafish 14(6), 561-573.

In recent years, a rapidly increasing number of scientific papers have been published that utilize zebrafish (Danio rerio) as an alternative model organism in the study of a wide range of biological phenomena from cancer...

Lemos Teixeira, D., Hötzel, M. J., Pinheiro Machado Filho, L. C. et al. 2017. Designing better water troughs: Does trough color influence dairy cows’ preference? Journal of Applied Animal Welfare Science 20(2), 192-197.

Eighteen lactating dairy cows were used to elucidate their preference for green, grey, or red troughs. The herd was managed under a rotational grazing system with ad-libitum access to water until 11:30 h. For 9...

Sadiq, M., Ramanoon, S., Shaik Mossadeq, W. et al. 2017. Association between lameness and indicators of dairy cow welfare based on locomotion scoring, body and hock condition, leg hygiene and lying behavior. Animals 7(11), 79.

Dairy cow welfare is an important consideration for optimal production in the dairy industry. Lameness affects the welfare of dairy herds by limiting productivity. Whilst the application of LS systems helps in identifying lame cows...

Fournel, S., Ouellet, V., Charbonneau, É. 2017. Practices for alleviating heat stress of dairy cows in humid continental climates: A literature review. Animals 7(5), 37.

Heat stress negatively affects the health and performance of dairy cows, resulting in considerable economic losses for the industry. In future years, climate change will exacerbate these losses by making the climate warmer. Physical modification...

Nordquist, R., van der Staay, F., van Eerdenburg, F. et al. 2017. Mutilating procedures, management practices, and housing conditions that may affect the welfare of farm animals: Implications for welfare research. Animals 7(2), 12.

A number of mutilating procedures, such as dehorning in cattle and goats and beak trimming in laying hens, are common in farm animal husbandry systems in an attempt to prevent or solve problems, such as...

von Keyserlingk, M. A. G., Amorim Cestari, A., Franks, B. 2017. Dairy cows value access to pasture as highly as fresh feed. Scientific Reports 7, 44953.

Many dairy cows in the developed world are now housed exclusively indoors with fewer than 5% of the 10 million lactating cows in the United States having access to pasture during the grazing season. Indoor...

Hawkins, P., McNeilly, A., Watson, J. et al. 2017. Report of the 2016 RSPCA/UFAW Rodent and Rabbit Welfare Group meeting. Animal Technology and Welfare 16(2), 77-86.

The RSPCA/UFAW Rodent (and now Rabbit) Welfare Group held a one-day meeting on 1 November 2016 at the University of Edinburgh and was attended by 70 delegates. Presentation topics included refinements in blood sampling rodents...

Carlson, A., Allen, C., Skoumbourdis, E. et al. 2017. Cooked food for non-human primates: A discussion by the Laboratory Animal Refinement & Enrichment Forum. Animal Technology and Welfare 16(2), 124-126.

"Do any of you give cooked food like pasta, potatoes or vegetables to non-human primates? What’s your experience? Do the animals benefit from cooked food; do they like it; does it affect their health in...

Mandel, R., Nicol, C. J. 2017. Re-direction of maternal behaviour in dairy cows. Applied Animal Behaviour Science 195, 24-31.

In the milk producing industry, most aspects of maternal behaviour are discouraged, but milk production is actively maintained in the absence of the calf. The process of milk let down, is mediated, at least partly...

Van Os, J. M. C., Mintline, E. M., DeVries, T. J. et al. 2017. Motivation of naïve feedlot cattle to obtain grain and individual responses to novelty. Applied Animal Behaviour Science 197, 68-74.

Beef cattle may be fattened before slaughter using a high-energy, grain-based diet. Although previous research suggests cattle prefer grain, their motivation to obtain this feed has not been quantified. The objective of this study was...

Buchli, C., Raselli, A., Bruckmaier, R. et al. 2017. Contact with cows during the young age increases social competence and lowers the cardiac stress reaction in dairy calves. Applied Animal Behaviour Science, 187, 1-7.

Separating calf and cow within 24h after birth is common practice in dairy farms. Some dairy farmers, however, practice a rearing system in which the calves are nursed by their dam or by foster cows...

Meagher, R. K., Weary, D. M., von Keyserlingk, M. A. G. 2017. Some like it varied: Individual differences in preference for feed variety in dairy heifers. Applied Animal Behaviour Science 195, 8-14.

Motivation to explore is believed to be widespread among animals, but exploratory behaviour varies within populations. Offering variety in feed is one simple way of allowing intensively housed dairy cattle to express exploratory foraging behaviour...

Earley, B., McNamara, J. D., Jerrams, S. J. et al. 2017. Effect of concrete slats, three mat types and out-wintering pads on performance and welfare of finishing beef steers. Acta Veterinaria Scandinavica 59(1), 34.

The objective was to investigate the effect of placing mats on concrete slatted floors on performance, behaviour, hoof condition, dirt scores, physiological and immunological variables of beef steers, and to compare responses with animals on...

Stevens, C. H., Croft, D. P., Paull, G. C. et al. 2017. Stress and welfare in ornamental fishes: What can be learned from aquaculture? Journal of Fish Biology 91(2), 409-428.

The ornamental fish trade is estimated to handle up to 1.5 billion fishes. Transportation and handling of fishes imposes a range of stressors that can result in mortality at rates of up to 73%. Given...

Lidster, K., Readman, G. D., Prescott, M. J. et al. 2017. International survey on the use and welfare of zebrafish Danio rerio in research. Journal of Fish Biology 90(5), 1891-1905.

A survey was conducted regarding zebrafish Danio rerio use for scientific research with a focus on: anaesthesia and euthanasia; housing and husbandry; breeding and production; refinement opportunities. A total of 98 survey responses were received...

Pilatti, J. A., Corrêa Vieira, F. M. 2017. Environment, behavior and welfare aspects of dairy cows reared in compost bedded pack barns system. Journal of Animal Behaviour and Biometeorology 5(3), 97-105.

The compost bedded pack barns is a loose housing confinement system for dairy cows, which aims to provide greater comfort in the resting area. Therefore, objective of this review was to investigate the environment, behavior...

Hill, H. M. 2017. The psychology of cows? A case of over-interpretation and personification. Animal Behavior and Cognition 4(4), 506–511.

Reviews of existing literature on topics that have been neglected, such as the subject of the cognitive and affective abilities of cows, are productive and necessary exercises in science (Elwen, Findlay, Kiszka, & Weir, 2011...