Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Message, R., Greenhough, B. 2019. “But it’s just a fish”: Understanding the challenges of applying the 3Rs in laboratory aquariums in the UK. Animals 9(12), 1075.

Adopting a social science perspective and qualitative methodology on the problem of laboratory fish welfare, this paper examines some underlying social factors and drivers that influence thinking, priorities and implementation of fish welfare initiatives and...

Mather, J. A. 2019. Ethics and care: For animals, not just mammals. Animals 9(12), 1018.

Animals come in a huge array of types, species and structures, but without realizing it, we have focused our care on those like us, mammals. They look something like us, so it's easy to empathize...

Pomerantz, O., Nyandwi, S., Baker, K., 2018. Providing feeding enrichment by hand mitigates anxiety among laboratory-housed rhesus macaques (Macaca mulatta). American Journal of Primatology 80(S1), 20 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #26).

Some husbandry procedures may be perceived as aversive by cage‐housed rhesus macaques. We assessed whether providing feeding enrichment by hand as opposed to placing it on a caging surface decreases anxiety responses to daily husbandry...

O’Rourke, D. P., Baccanale, C. L., Stoskopf, M. K. 2018. Nontraditional laboratory animal species (cephalopods, fish, amphibians, reptiles, and birds). ILAR Journal 59(2), 168-176.

Aquatic vertebrates and cephalopods, amphibians, reptiles, and birds offer unique safety and occupational health challenges for laboratory animal personnel. This paper discusses environmental, handling, and zoonotic concerns associated with these species.

Chatigny, F., Groman, D. B., Martinson, S. A. et al. 2018. Evaluation of tissue changes following intramuscular infiltration of lidocaine in rainbow trout Oncorhynchus mykiss. Journal of Fish Biology 92(4), 888-900.

Rainbow trout Oncorhynchus mykiss were infiltrated with either saline or lidocaine adjacent to the dorsal fin to assess histopathological changes. Infiltration was done as if it were being used as a local anaesthetic. Tissue lesions...

Gut, W., Crump, L., Zinsstag, J. et al. 2018. The effect of human interaction on guinea pig behavior in animal-assisted therapy. Journal of Veterinary Behavior 25, 56-64.

Guinea pigs are included in various animal-assisted interventions (AAIs), but no research has been published to date on behavioral changes in guinea pigs interacting with humans. The goal of this study was to evaluate the...

Cronin, K. A., Bethell, E. J., Jacobson, S. L. et al. 2018. Evaluating mood changes in response to anthropogenic noise with a response-slowing task in three species of zoo-housed primates. Animal Behavior and Cognition 5(2), 209–221.

In the zoo environment, anthropogenic noise is common as sound levels fluctuate due to visitors, construction, habitat design, and special events. In this study, changes in the mood of three species of zoo-housed primates in...

de Lima Rocha, A. D., Menescal-de-Oliveira, L., da Silva, L. F. S. 2017. Effects of human contact and intra-specific social learning on tonic immobility in guinea pigs, Cavia porcellus. Applied Animal Behaviour Science 191, 1-4.

Social learning is the capacity of animals to acquire adaptive information from others. In the case of fear responses, animals can learn fearful or non-fearful responses by observing the behavior of conspecifics. Tonic immobility (TI)...

Bayne, K. A., Beaver, B. V., Mench, J. A. et al. 2015. Laboratory animal behavior. In: Laboratory Animal Medicine, 3rd edition. Fox, J. G., Anderson, L., Otto, G., et al. (eds). Elsevier, Inc., Amsterdam, NL. pp. 1617-1651.

The study of laboratory animal behavior has increased steadily over the last decade, with expanding emphasis on a variety of commonly used species. In the United States, this trend was initially focused on species for...

Smith, J. J. 2014. Human-animal relationships in zoo-housed orangutans (P. abelii) and gorillas (G. g. gorilla): The effects of familiarity. American Journal of Primatology 76(10), 942-955.

I examined human-animal relationships (HARs) in zoo-housed orangutans (Pongo abelii) and gorillas (Gorilla gorilla gorilla) to see if they followed patterns similar to conspecific relationships in great apes and humans. Familiarity and social relationships guide...

McMillan, J. L., Perlman, J. E., Galvan, A. et al. 2014. Refining the pole-and-collar method of restraint: Emphasizing the use of positive training techniques with rhesus macaques (Macaca mulatta). JJAALAS 53(1), 61-68.

The pole-and-collar method is one of several techniques that enable the safe transfer of a nonhuman primate from its home environment into a restraint chair without the need for sedation. It has been used within...

Nicholson, G., Sheldon, E. L., Hamilton, J. et al. 2014. Sand pools as a novel enrichment for rabbits. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 571. (Abstract #P83).

For anyone who has housed rabbits in an artificial plastic environment, what to provide as a nonfood enrichment can be an issue. Nonfood enrichment, or environmental enrichment, can be any toy, engaging sights or sounds...

Andrews, C. 2014. Using positive reinforcement training to refine daily medical treatment of a cynomolgus macaque. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 565-566. (Abstract #P63).

Medical care of nonhuman primates in a laboratory setting can be challenging due to the safety concerns inherent in handling conscious animals. A mature, adult male cynomolgus macaque presented with a chronic foot condition that...

Reinhardt, V. (ed.) 2013. Compassion Makes a Difference - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume III. Animal Welfare Institute, Washington, DC.

This is the third volume of discussions that took place on the Laboratory Animal Refinement & Enrichment Forum (LAREF). This forum is dedicated to the exchange of personal experiences of refining the conditions under which...

Cruden, J., Bester, J., Baines, N. et al. 2013. Will a more consistent handling method lead to a calmer rabbit? Animal Technology and Welfare 11, 127-130.

The authors describe various methods of handling and restraining rabbits, and propose that while many methods are appropriate, rabbits respond better if only one method is used consistently.

Bliss-Moreau, E., Moadab, G., Theil, J. 2013. Efficient cooperative chair training. American Journal of Primatology 75(S1), 67. (36th Meeting of the American Society of Primatologists Scientific Program, Abstract #118)

Traditional procedures for training nonhuman primates to be restrained in chairs typically involve very little use of positive reinforcement. In this talk, we detail a refined chair training procedure which uses a mix of positive...

Fante, F., Baldan, N., De Benedictis, G. M. et al. 2012. Refinement of a macaque transplantation model: Application of a subcutaneous port as a means for long-term enteral drug administration and nutritional supplementation. Laboratory Animals 46(2), 114-121.

A new application of a device enabling the long-term enteral administration of drugs or nutritional supplementation was developed for implementing in research entailing the use of macaques (Macaca fascicularis). After implanting a subcutaneous port, a...

Blyth, L. 2012. A safe, gentle and effective method of oral dosing guinea-pigs. Animal Technology and Welfare 11, 187-188.

Guinea pigs are difficult to oral gavage dose. Previous adverse effects from this dosing method, using rigid catheters, had caused an earlier endpoint to studies and loss of data. We therefore developed a prototype gag...

NC3Rs, University of Stirling. 2011. Common Marmoset Care [Online resource].

The three main divisions of 'marmosetcare.com' aim respectively to promote: an understanding of the range of behaviour in this species, placing this behaviour in the context of its natural habitat and promoting good welfare in...

Swennes, A. G., Alworth, L. C., Harvey, S. B. et al. 2011. Human handling promotes compliant behavior in adult laboratory rabbits. JAALAS 50(2), 41-45.

Routine laboratory procedures can be stressful for laboratory animals. We wanted to determine whether human handling of adult rabbits could induce a degree of habituation, reducing stress and facilitating research-related manipulation. To this end, adult...

Hawkins, P., Burn, C., Hurst, J. et al. 2011. Report of the 2010 RSPCA/UFAW rodent welfare group meeting - The effect of husbandry on welfare and promoting good practice. Animal Technology and Welfare 10(2), 105-114.

The RSPCA/UFAW Rodent Welfare Group holds a one-day meeting every autumn so that its members can discuss current welfare research, exchange views on rodent welfare issues and share experiences of the implementation of the 3Rs...

Coleman, K. 2011. Caring for nonhuman primates in biomedical research facilities: Scientific, moral and emotional considerations. American Journal of Primatology 73(3), 220-225.

Animal care for nonhuman primates (NHPs) in biomedical facilities has undergone major changes in the past few decades. Today, most primate facilities have dedicated and highly trained animal care technicians who go to great efforts...

Watts, A. 2010. Thinking outside the box in box training. Tech Talk [The Newsletter for Laboratory Animal Science Technicians] 15(2), 3.

At the Oregon National Primate Research Center, we train animals to enter transfer boxes using positive reinforcement training (PRT), a type of training in which the trainer reinforces desired behaviors (such asentering the transfer box)...

Moreau, E. 2010. To squeeze or not to squeeze? A Discussion on LAREF, September, 2009. Laboratory Primate Newsletter 49(2), 3-4.

The discussion was started by the following questions: "Is the squeeze-back mechanism more or less stressful than the pole and collar system for removing a macaque from his cage for an IM (intramuscular) injection?" and...

McMillan, J. L., Galvan, A., Wichmann, T. et al. 2010. The use of positive reinforcement during pole and collar training of rhesus macaques (Macaca mulatta). American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 705-706 (Abstract #P78).

The pole and collar method enables safe transfer of a monkey from their home environment to a restraint chair without sedation. The ability to conduct procedures with a conscious and cooperative subject is cost effective...