Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Acharya, R., Rault, J.-L. 2020. Risk factors for feather-damaging behavior in companion parrots: A social media study. Journal of Veterinary Behavior 40, 43-49.

Studies on the etiology of behavioral problems often involve interference in the animal's routine or reliance on owners' self-reports like surveys. Gathering data from videos posted on social media, a technique coined ‘video mining’, offers...

de Castro Travnik, I., de Souza Machado, D., de Silva Gonçalves, L. et al. 2020. Temperament in domestic cats: A review of proximate mechanisms, methods of assessment, its effects on human—cat relationships, and one welfare. Animals 10(9), 1516.

Temperament can be defined as interindividual differences in behavior that are stable over time and in different contexts. The terms ‘personality’, ‘coping styles’, and ‘behavioral syndromes’ have also been used to describe these interindividual differences...

Van Wijk, H., Haida, D., Duncan, C. et al. 2020. Surgery refinements improve success rates in rat bile collection. Animal Technology and Welfare 19(3), 251-254.

This poster compares the model success rates using 2 different housing regimes during recovery from surgery. Catheters were placed in the bile duct to collect bile; a second catheter was secured into the duodenum where...

Rufiange, M., Leung, V. S.Y., Simpson, K. et al. 2020. Prewarming followed by active warming is superior to passive warming in preventing hypothermia for short procedures in adult rats (Rattus norvegicus) under isoflurane anesthesia. JAALAS 59(4), 377-383.

General anesthesia is a common procedure in laboratory rats; however, it impairs thermoregulation, rapidly leading to hypothermia as warm core blood is distributed to the cooler periphery. The protective strategy of prewarming before the onset...

Klune, C. B., Robbins, H. N. K., Leung, V. et al. 2020. Hypothermia during general anesthesia interferes with pain assessment in laboratory rats (Rattus norvegicus). JAALAS 59(6), 719-725.

Accurate pain assessment methods are necessary to ensure animal welfare and reliable data collection in animal research. The Rat Grimace Scale (RGS), a facial expression pain scale, allows effective identification of pain. However, the potential...

Madureira, T. V., Costa, J. L., Malhão, F. et al. 2019. Design of a multi-parametric profile for assessing the acclimation period of juvenile brown trout after an acute transport to new housing environment. Applied Animal Behaviour Science 219, 104835.

Fish batches are often transported from aquacultures to laboratory facilities, and this fact triggers a pre-stressed condition that can cause alterations in both physiological and behavioural status of animals. The acclimation before fish trials is...

McMurray, C., Allen, N., Hook, S. et al. 2018. I3S software as a refinement technique to identify individuals within a captive Scyliorhinus canula population. Animal Technology and Welfare 17(3), 204-205 (IAT Congress 2018 Poster Presentation).

Demarking individual animals within a group is often required in research. However, the process of invasive tagging induces stress and if a tag becomes detached it may wound the animal and/or prevent identification. Photo identification...

Thomson, J., Mungall, W. 2019. Using subcuticular stitching in rats to replace skin closure clips as a refinement. Animal Technology and Welfare 18(1), 75-76.

Skin closure clips are widely used within the University of Edinburgh to close incision sites for various procedures in both rats and mice. In rats the skin closure clips very often come out as a...

Lee, L. Y., Lee, D., Ryu, H. et al. 2019. Capnography-guided endotracheal intubation as an alternative to existing intubation methods in rabbits. JAALAS 58(2), 240-245.

Rabbits provide a unique challenge for routine endotracheal intubation in clinical practice because of various distinctive anatomic and physiologic features. Many previously proposed methods for endotracheal intubation in rabbits are limited by several factors, including...

Association of Primate Veterinarians. 2019. Association of Primate Veterinarians’ Position Statement: Cerebrospinal fluid aspiration for nonhuman primates in biomedical research. JAALAS 58(4), 428-429.

The Association of Primate Veterinarians (APV) recognizes that CSF collection may be required for both clinical and research purposes in nonhuman primates (NHP). Because there are inherent risks associated with the technique, the laboratory animal...

Reemeyer, J. E., Harris, J. C., Hernandez, A. M. et al. 2019. Effects of passive integrated transponder tagging on cortisol release, aerobic metabolism and growth of the Gulf killifish Fundulus grandis. Journal of Fish Biology 94(3), 422-433.

The effects of passive integrated transponder (PIT) tagging on cortisol release, standard metabolic rate (SMR) and daily specific growth rate (GS) were evaluated in the Gulf killifish, Fundulus grandis, a small estuarine fish native to...

Solås, M. R., Skoglund, H., Salvanes, A. G. V. 2019. Can structural enrichment reduce predation mortality and increase recaptures of hatchery-reared Atlantic salmon Salmo salar L. fry released into the wild? Journal of Fish Biology 95(2), 575-588.

Captive-reared fish often have poor survival in the wild and may fail to boost threatened populations. Enrichment during the nursery period can in some circumstances generate a broader behavioural repertoire than conventional hatchery production. Yet...

Watz, J. 2019. Structural complexity in the hatchery rearing environment affects activity, resting metabolic rate and post-release behaviour in brown trout Salmo trutta. Journal of Fish Biology 95(2), 638-641.

The effects of structural enrichment in the hatchery rearing environment of brown trout Salmo trutta was linked to post-release performance. Enrichment resulted in reduced swimming activity scored in an open field test and reduced movement...

Winter, E. R., Nyqvist, M., Britton, J. R. 2019. Non-lethal sampling for stable isotope analysis of pike Esox lucius: How mucus, scale and fin tissue compare to muscle. Journal of Fish Biology 95(3), 956-958.

Stable isotope analysis (SIA) was used to examine the isotopic relationships between dorsal muscle and fin, scale and epidermal mucus in pike Esox lucius. δ13C and δ15N varied predictably within each tissue pairing, with conversion...

Animal Welfare Institute. 2019. A new beginning for retired laboratory rabbits. Animal Welfare Institute (AWI) Quarterly 68(4) Winter, 10-11.

This article describes the rehoming of 10 laboratory female rabbits now living as a group in a private shelter.

National Academies of Sciences, Engineering, and Medicine. 2019. Care, Use, and Welfare of Marmosets as Animal Models for Gene Editing-Based Biomedical Research: Proceedings of a Workshop. The National Academies Press: Washington, DC, 122 pp.

The marmoset, a type of small monkey native to South America, is a research model of increasing importance for biomedical research in the United States and globally. Marmosets offer a range of advantages as animal...

Shelton, K. A., Nehete, B. P., Chitta, S. et al. 2019. Effects of transportation and relocation on immunologic measures in cynomolgus macaques (Macaca fascicularis). JAALAS 58(6), 774–782.

NHP are a small, but critical, portion of the animals studied in research laboratories. Many NHP are imported or raised at one facility and subsequently moved to another facility for research purposes. To improve our...

Descovich, K. A., Richmond, S. E., Leach, M. C. et al. 2019. Opportunities for refinement in neuroscience: Indicators of wellness and post-operative pain in laboratory macaques. Alternatives to Animal Experimentation 36(4), 535-554.

Being able to assess pain in nonhuman primates undergoing biomedical procedures is important for preventing and alleviating pain, and for developing better guidelines to minimize the impacts of research on welfare in line with the...

Peric, T., Comin, A., Corazzin, M., et al. 2018. Hair cortisol concentrations in New Zealand white rabbits subjected to surgery. Animal Welfare 27(1), 13-20.

The aim of this study was to assess hair cortisol concentrations in New Zealand white rabbits (Oryctolagus cuniculus) that were subjected to relocation and surgery to evaluate HPA-axis activity; in addition, we used this marker...

Harikrishnan, V. S., Hansen, A. K., Abelson, K. S. P. et al. 2018. A comparison of various methods of blood sampling in mice and rats: Effects on animal welfare. Laboratory Animals 52(3), 253-264.

This study was conducted to investigate the effects of blood sampling on animal welfare in a total of 60 NTac:SD rats and 72 C57BL/6NTac mice of both sexes. Blood was sampled either by sublingual vein...

Hoffman, J. F., Fan, A. X., Neuendorf, E. H. et al. 2018. Hydrophobic sand versus metabolic cages: A comparison of urine collection methods for rats (Rattus norvegicus). JAALAS 57(1), 51-57.

A common method for urine collection from rats requires the use of a metabolic cage, thus exposing animals to extended periods of isolation in an unfamiliar cage with a wire-mesh floor. A new method involving...

Read, H., Perry, R. 2018. A refinement to Schedule 1. Animal Technology and Welfare 17(2), 117-120.

There are varying methods used for animal restraint and angle of injection. It remains unclear whether one method is more accurate than others. The primary objectives were to examine whether inverted restraint of rats resulted...

Beamish, G., Chapman, C., Lomax, A. 2018. Design by intravenous injection in the Syrian hamster. Animal Technology and Welfare 17(2), 124-125.

Repeated injections in rats and mice are typically done via the tail vein. For hamsters, the tail is not an option. In this paper we explore the development and refinement of IV dosing in the...

van Wijk, H., Crossman, L., Adjin-Tettey, G. et al. 2018. Advances in animal welfare and scientific outcomes of the bile duct cannulated rat model utilised in ADME studies. Animal Technology and Welfare 17(1), 64-67.

Since rats lack a gall bladder, they are an ideal model for investigating continuous biliary excretion and biotransformation. The design and implementation of a modified tail cuff and cannula system introduced at Covance permits the...

Gottlieb, D. H., Del Rosso, L, Sheikhi, F. et al. 2018. Personality, environmental stressors, and diarrhea in Rhesus macaques: An interactionist perspective. American Journal of Primatology 80(12), e22908.

Previous research has repeatedly shown both personality and psychological stress to predict gastrointestinal disorders and chronic diarrhea in humans. The goal of the present research was to evaluate the role of personality, as well as...