Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Tresler, A., Rasbach, C., Stevens, T. et al. 2021. Adapting positive reinforcement training to novel laboratory species. Laboratory Animal Science Professional 9(6) (November/December), 42-44.

Positive reinforcement training (PRT) is a component of a comprehensive species-appropriate enrichment program to train specific species behaviors and reduce the stress on animals. Our facility has historically used PRT with nonhuman primates, so we...

Melfi, V. A., Dorey, N. R., Ward, S. (Eds.) 2020. Zoo Animal Learning and Training. John Wiley & Sons: Hoboken, NJ, 384 pp.

Comprehensively explains animal learning theories and current best practices in animal training within zoos. This accessible, up-to-date book on animal training in a zoo/aquaria context provides a unified approach to zoo animal learning, bringing together...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

Michaels, C. J., Gini, B. F., Clifforde, L. 2020. A persistent abnormal repetitive behaviour in a false water cobra (Hydrodynastes gigas). Animal Welfare 29(4), 371-378.

Stereotypies (a subset of Abnormal Repetitive Behaviour [ARB]) are characterised by an unchanging pattern of behaviour and in captive animals can be associated with poor welfare. Although well known in certain taxa, little is known...

Munari, C., Ponzio, P., Macchi, E. et al. 2020. A multifactorial evaluation of different reproductive rhythms and housing systems for improving welfare in rabbit does. Applied Animal Behaviour Science 230, 105047.

The most widespread reproductive rhythm practiced in rabbit farming is based on artificial insemination (AI) performed at around 11 days pospartum. This approach results in high production rates, but requires high yearly replacement of animals...

Murai, T., Sukoff Rizzo, S. J. 2020. The importance of complementary collaboration of researchers, veterinarians, and husbandry staff in the successful training of marmoset behavioral assays. ILAR Journal 61(2-3), 230-247.

Interest in marmosets as research models has seen exponential growth over the last decade, especially given that the research community is eager to improve on gaps with historical animal models for behavioral and cognitive disorders...

Butler, J. L., Kennerley, S. W. 2019. Mymou: A low-cost, wireless touchscreen system for automated training of nonhuman primates. Behaviour Research Methods 51, 2559–2572.

Training nonhuman primates (NHPs) to perform cognitive tasks is essential for many neuroscientific investigations, yet laboratory training is a time-consuming process with inherent limitations. Habituating NHPs to the laboratory staff and experimental equipment can take...

Neal Webb, S. J., Hau, J., Schapiro, S. J. et al. 2019. Relationships between captive chimpanzee (Pan troglodytes) welfare and voluntary participation in behavioural studies. Applied Animal Behaviour Science 214, 102-109.

Voluntary participation in behavioural studies offers several scientific, management, and welfare benefits to non-human primates (NHPs). Aside from the scientific benefit of increased understanding of NHP cognition, sociality, and behaviour derived from noninvasive behavioural studies...

Wallace, E. K., Herrelko, E. S., Koski, S. E. et al. 2019. Exploration of potential triggers for self-directed behaviours and regurgitation and reingestion in zoo-housed chimpanzees. Applied Animal Behaviour Science 221, 104878.

The unique challenges faced by animals living in zoos can lead to the production of anxiety-related behaviours. In this study we aimed to understand what specific factors may cause chimpanzees to display these behaviours. In...

Kroeker, R., Chichester, L., Lee, G. H. et al. 2019. Effects of pregnancy, outdoor access, and antifungal medication on hair loss in breeding-age female pigtailed macaques (Macaca nemestrina). Comparative Medicine 69(3), 221–227.

Over 18 mo, adult female pigtailed macaques (Macaca nemestrina) housed at a breeding facility in Arizona were monitored every 6 mo for alopecia. The study period coincided with the movement of a majority of animals...

Bloomsmith, M. A., Clay, A. W., Lambeth, S. P. et al. 2019. Survey of behavioral indices of welfare in research chimpanzees (Pan troglodytes) in the United States. JAALAS 58(2), 160-177.

Chimpanzees demand specialized housing and care and the highest degree of attention to animal welfare. The current project used a survey method to collate information on chimpanzee housing and behavioral indices of welfare across all...

Gray, H., Thiele, A., Rowe, C. 2019. Using preferred fluids and different reward schedules to motivate rhesus macaques (Macaca mulatta) in cognitive tasks. Laboratory Animals 53(4), 372–382.

Rhesus macaques (Macaca mulatta) used in behavioural neuroscience are often required to complete cognitively complex tasks, for which a high level of motivation is essential. To induce motivation, researchers may implement fluid-restriction protocols, whereby freely...

Poirier, C., Oliver, C. J., Castellano Bueno, J. et al. 2019. Pacing behaviour in laboratory macaques is an unreliable indicator of acute stress. Scientific Reports 9, 7476.

Pacing behaviour, the most frequent stereotypic behaviour displayed by laboratory rhesus macaques (Macaca mulatta) is often used as an indicator of stress. In this study, we investigated how reliable this welfare indicator is at detecting...

Geerah, D. R., O’Hagan, R. P., Wirdateti, W. et al. 2019. The use of ultrasonic communication to maintain social cohesion in the Javan slow loris (Nycticebus javanicus). Folia Primatologica 90(5), 392–403.

Only a handful of primate taxa use ultrasonic vocalisations (those ≥20 kHz) to communicate. The extent and uses of ultrasonic communication remain poorly understood, potentially ranging from echolocation, advertisement of reproductive status and resource availability...

McMillan, F. D. (ed). 2019. Mental Health and Well-being in Animals (2nd ed). CABI, Wallingford, UK.

This second edition is fully revised, expanded, and comprehensively updated with the most current knowledge about the full array of mental health issues seen in animals. Written by key opinion leaders, internationally-recognized experts and specialists...

Mason, S., Premereur, E., Pelekanos, V. et al. 2019. Effective chair training methods for neuroscience research involving rhesus macaques (Macaca mulatta). Journal of Neuroscience Methods 317, 82-93.

Background: Neuroscience research using macaques remains fundamental in our endeavours to understand how the human brain functions. Applying the refinement principle of the 3Rs is essential to optimise the monkeys’ welfare and still produces high...

Leeds, A., Lukas, K. E. 2018. Experimentally evaluating the function of self-directed behaviour in two adult mandrills (Mandrillus sphinx). Animal Welfare 27(1), 81-86.

Given the difficulties of conducting regular endocrine and veterinary assessments of animals, behavioural observations are often the most commonly used tool to assess the welfare of animals in human care. Behavioural measures, inexpensive and convenient...

Costa, R., Sousa, C., Llorente, M. 2018. Assessment of environmental enrichment for different primate species under low budget: A case study. Journal of Applied Animal Welfare Science 21(2), 185-199.

The 2011 European Union Zoo Inquiry presented evidence that most zoos fail to achieve adequate levels of nonhuman animal welfare. Appropriate environmental enrichment (EE) can play a role in the promotion of welfare. However, financial...

Bacon, H. 2018. Behaviour-based husbandry—A holistic approach to the management of abnormal repetitive behaviors. Animals 8(7), 103.

The field of zoo animal welfare science has developed significantly over recent years. However despite this progress in terms of scientific research, globally, zoo animals still face many welfare challenges. Recently, animal welfare frameworks such...

Brand, C. M., Marchant, L. F. 2018. Prevalence and characteristics of hair plucking in captive bonobos (Pan paniscus) in North American zoos. American Journal of Primatology 80(4), e22751.

When primates exhibit hair loss and are observed to engage in self or social hair plucking (a rapid jerking away of the hair shaft and follicle by the hand or mouth, often accompanied by inspection...

Khudamrongsawat, J., Nakchamnan, K., Laithong, P. et al. 2018. Abnormal repetitive behaviours of confiscated slow loris (Nycticebus spp.) in Thailand. Folia Primatologica 89(3-4), 216-223.

The illegal wildlife trade, especially of live animals, is a major threat to slow lorises. Large numbers of confiscated slow lorises are sent to rescue facilities. We aimed to describe the occurrence and types of...

Lutz, C. K. 2018. A cross-species comparison of abnormal behavior in three species of singly-housed old world monkeys. Applied Animal Behaviour Science 199, 52-58.

Abnormal behavior occurs in a number of captive nonhuman primate species and is often used as an indicator of welfare. However, reported levels of abnormal behavior often vary across species, making general welfare judgments difficult...

Franklin, A. N., Martin, A. L., Brennan, C. R. et al. 2018. A comparison of desensitization techniques to train rhesus macaques to take food from a human. American Journal of Primatology 80(S1), 13 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #5).

Some primates express fear of or avoid interaction with humans, including accepting food. Counter‐conditioning training designed to reduce fear and increase the acceptance of food from a person's hand can reduce the stress an animal...

Coleman, K., Robertson, N. D. 2018. Training non-lactating rhesus macaques to act as foster mothers. American Journal of Primatology 80(S1), 34-35 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #94).

There can be psychological and physiological consequences resulting from nursery rearing rhesus macaques. To reduce the need for nursery rearing, orphaned infants are often placed with lactating foster mothers. Unfortunately, a supply of these lactating...

Martin, A. L., Franklin, A. N., Perlman, J. E. et al. 2018. Systematic assessment of food item preference and reinforcer effectiveness: Enhancements in training laboratory-housed rhesus macaques. Behavioural Processes 157, 445-452.

The use of systematic preference assessments can enhance positive reinforcement training with captive animals. We found that the multiple stimulus without replacement (MSWO) technique identified food preferences in laboratory housed rhesus macaques, with raisins and...