Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Cowl, V. B., Walker, S. L., Shultz, S. 2021. Reproductive males are effective at managing conflict in captive Sulawesi crested macaques (Macaca nigra). American Journal of Primatology 83(7), e23266.

Group size, density, and composition significantly influence the expression of agonism and, as demography is frequently manipulated in captivity, natural mechanisms of conflict management may be disrupted. Here, we examine how changes to the social...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Gehlen, H., Krumbach, K., Thöne-Reineke, C. 2021. Keeping stallions in groups—Species-appropriate or relevant to animal welfare? Animals 11(5), 1317.

This literature review was aimed at analyzing whether stallion husbandry in groups is possible and desirable or poses risks. This was determined on the basis of different studies in order to be able to give...

Krueger, K., Esch, L., Farmer, K. et al. 2021. Basic needs in horses?—A literature review. Animals 11(6), 1798.

Every animal species has particular environmental requirements that are essential for its welfare, and when these so-called “basic needs” are not fulfilled, the animals suffer. The basic needs of horses have been claimed to be...

Bailey, K. L., Bloomsmith, M. A., Michopoulos, V. et al. 2021. Influence of female coalitionary aggressive behavior on the success of male introductions to female groups of rhesus macaques (Macaca Mulatta). Applied Animal Behaviour Science 237, 105293.

Migration patterns of wild rhesus macaque males are often mimicked in captivity by introducing unfamiliar males to female groups every few years. This strategy prevents inbreeding and has been shown to encourage group stability once...

Stow, R., Kendrick, J., Ibbotson, N. et al. 2021. A new group housing approach for non-human primate metabolism studies. Journal of Pharmacological and Toxicological Methods 107, 106947.

Understanding the absorption, distribution, metabolism and excretion (ADME) of candidate drugs in preclinical species is an integral part of the safety and efficacy evaluation in drug development. For this purpose, the housing of single animals...

Beisner, B. A., Remillard, C. M., Moss,S. et al. 2021. Factors influencing the success of male introductions into groups of female rhesus macaques: Introduction technique, male characteristics and female behavior. American Journal of Primatology 83(9), e23314.

In captive populations of rhesus macaques, novel adult males are commonly introduced to female groups every few years to prevent inbreeding, which mimics male dispersal in wild macaque populations. However, introducing adult males is challenging...

Pomerantz, O., Capitanio, J. P. 2021. Temperament predicts the quality of social interactions in captive female rhesus macaques (Macaca mulatta). Animals 11(8), 2452.

Previous reports suggest that female macaques with greater similarity in emotionality and nervous temperament, as evaluated in a well-established BioBehavioral Assessment (BBA) at the California National Primate Research Center, were more likely to form successful...

Le Balle, R., Cote, J., Santos Fernandez, F. A. 2021. Evidence for animal personalities in two Brazilian tortoises (Chelonoidis denticulatus and Chelonoidis carbonarius) and insights for their conservation. Applied Animal Behaviour Science 241, 105400.

Animal personality, the consistent between-individual differences in e.g., risk-taking, exploration, antipredator or mating behaviours, has major impacts on the fitness of individuals in many species. Understanding how to quantify animal personality should help us predicting...

Gartland, K. N., Carrigan, J., White, F. J. 2021. Preliminary relationship between overnight separation and wounding in bachelor groups of western lowland gorillas (Gorilla gorilla gorilla). Applied Animal Behaviour Science 241, 105388.

Despite no significant difference in wounding between bachelor and mixed-sex groups of western lowland gorillas (Gorilla gorilla gorilla) in zoological settings, anecdotal concerns around the frequency and severity of wounding in bachelor groups have perpetuated...

Balasubramaniam, K. N., Beisner, B. A., McCowan, B. et al. 2021. Female social structure influences, and is influenced by, male introduction and integration success among captive rhesus macaques (Macaca mulatta). Behaviour 158(11), 1007–1042.

Animal social structure is influenced by multiple socioecological factors. Of these, the links between changes to group demography through the arrival of new individuals and residents' social structure remain unclear. Across seven groups of captive...

Guerrero-Martin, S. M., Rubin, L. H., McGee, K. M. et al. 2021. Psychosocial stress alters the immune response and results in higher viral load during acute simian immunodeficiency virus infection in a pigtailed macaque model of human immunodeficiency virus. The Journal of Infectious Diseases 224(12), 2113–2121.

Although social distancing is a key public health response during viral pandemics, psychosocial stressors, such as social isolation, have been implicated in adverse health outcomes in general [1] and in the context of infectious disease...

MacAllister, R. P., Heagerty, A., Coleman, K. 2020. Behavioral predictors of pairing success in rhesus macaques (Macaca mulatta). American Journal of Primatology 82(1), e23081.

Pair housing is one of the most important components of behavioral management for caged macaques; however, it can result in aggression and injury if partners are incompatible. Knowing when to proceed and when to stop...

Skinner, M., Miller, N. 2020. Aggregation and social interaction in garter snakes (Thamnophis sirtalis sirtalis). Behavioral Ecology and Sociobiology 74, 51.

Previous research has shown that competition, familiarity, diet, and relatedness can all influence aggregation patterns in garter snakes. We controlled for these factors and examined social aggregation patterns in juvenile Eastern garter snakes (Thamnophis sirtalis...

Johnston, J. R., Meeker, T. L., Ramsey, J. K. et al. 2020. Utility of automated feeding data to detect social instability in a captive breeding colony of rhesus macaques (Macaca mulatta): A case study of intrafamily aggression. JAALAS 59(1), 46–57.

Some captive breeding colonies of rhesus macaques live in large outdoor multimale, multifemale social groups. These groups are composed of several matrilineal families, governed by a clear female dominance hierarchy. Aggression within the same or...

Mishra, P. S., Pal, A., Velankar, A. D. et al. 2020. Does rank rule? Rank-related grooming patterns in Nicobar long-tailed macaques Macaca fascicularis umbrosus. Primates 61(3), 443–453.

Primates maintain social bonds with specific individuals in the group by directing grooming toward them. Social grooming is often targeted toward individuals with whom the most benefits can be exchanged, which are usually the high-ranking...

Stocker, M. Loretto, M.-C., Sterck, E. H. M. et al. 2020. Cooperation with closely bonded individuals reduces cortisol levels in long-tailed macaques. Royal Society Open Science 7(5), 7191056.

Many animal species cooperate with conspecifics in various social contexts. While ultimate causes of cooperation are being studied extensively, its proximate causes, particularly endocrine mechanisms, have received comparatively little attention. Here, we present a study...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

Cassidy, L. C., Hannibal, D. L., Semple, S. et al. 2020. Improved behavioral indices of welfare in continuous compared to intermittent pair-housing in adult female rhesus macaques (Macaca mulatta). American Journal of Primatology 82(10), e23189.

Limiting opportunities for captive nonhuman primates (NHPs) to express species-specific social behaviors may disrupt the adaptive drive for social companionship and may lead to increases in coping behaviors and inactivity. While captive NHPs show improved...

Rankins, E. M., Wickens, C. L. 2020. A systematic review of equine personality. Applied Animal Behaviour Science 231, 105076.

Examining the literature suggests equine personality is of interest to behavior and welfare scientists and those involved in the equine industry. Study and assessment of personality is critical because of the profound implications certain traits...

Newman, R., McKeown, S., Power, T. et al. 2020. Introducing three new males into a captive lion-tailed macaque (Macaca silenus) group. Journal of Zoo and Aquarium Research 8(3), 212-217.

The introduction of an unfamiliar animal to a new individual or group can be highly stressful for any animal. Various studies have tried to determine the best method for introducing unfamiliar animals to each other...

Yngvesson, J., Rey Torres, J. C., Lindholm, J. et al. 2019. Health and body conditions of riding school horses housed in groups or kept in conventional tie-stall/box housing. Animals 9(3), 73.

We compared welfare measures of horses among Swedish riding schools (RS) during winter where horses were kept either in group housing (n = 8) or in tie-stalls/boxes (n = 8), Health data for six previous...

Beisner, B. A., Wooddell, L. J., Hannibal, D. L. et al. 2019. High rates of aggression do not predict rates of trauma in captive groups of macaques. Applied Animal Behaviour Science 212, 82-89.

Socially inflicted traumas are a major concern for the management of captive groups of rhesus macaques. Rhesus macaques are the most commonly used nonhuman primate in biomedical research, and social housing is optimal for promoting...

Berg, M. R., Heagerty, A., Coleman, K. 2019. Oxytocin and pair compatibility in adult male rhesus macaques (Macaca mulatta). American Journal of Primatology 81(8), e23031.

Pair housing is considered one of the best ways of promoting psychological wellbeing for caged macaques. However, incompatible partnerships can result in stress or aggression. Though previous studies have analyzed the role of variables such...

Euet, A., Lemarchand, J., Parias, C., Mach, N. et al. 2019. Housing horses in individual boxes is a challenge with regard to welfare. Animals 9(9), 621.

Horses are mainly housed in individual boxes. This housing system is reported to be highly detrimental with regard to welfare and could trigger the expression of four behavioural indicators of a compromised welfare state: stereotypies...