Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
de Andrade Kogima, P., Diesel, T. A., Vieira, F. M. C. et al. 2022. The welfare of dairy cows in pasture, free stall, and compost barn management systems in a Brazilian subtropical region. Animals 12(17), 2215.

The effect of milk production systems on the welfare of dairy cows has been studied worldwide, but studies that compare pasture-based, compost barn, and free stall systems, according to animal welfare, are more scarce. In...

Mastellone, V., Musco, N., Infascelli, F. et al. 2022. Higher forage:concentrate ratio and space availability may favor positive behaviors in dairy cows. Journal of Veterinary Behavior 51, 16-22.

A novel livestock management system (LMS) for dairy cows mainly based on a high forage:concentrate ratio, no silage, and large outdoor paddocks, has been introduced in Italy during the last five years. It was proved...

McLeod, A. R., Burton, J. A., Mackey, C. A. et al. 2022. An assessment of ambient noise and other environmental variables in a nonhuman primate housing facility. Lab Animal 51(8), 219-226.

Acoustic noise and other environmental variables represent potential confounds for animal research. Of relevance to auditory research, sustained high levels of ambient noise may modify hearing sensitivity and decrease well-being among laboratory animals. The present...

Sonne, C., Alstrup, A. K. O., Pertoldi, C. et al. 2022. Cortisol in manure from cattle enclosed with nofence virtual fencing. Animals 12(21), 3017.

To increase the efficiency and geographic expansion of nature conservation, large grazers have recently been used, either in the form of wild hoof-bearing animals or as domesticated ruminants including cattle. Using physical fencing limits migrating...

Galpayage Dona, H. S., Solvi,C., Kowalewska, A. et al. 2022. Do bumble bees play? Animal Behaviour 194, 239-251.

A variety of animals have been found to interact with and manipulate inanimate objects ‘just for fun’, that is, to play. Most clear examples of object play come from mammals and birds. However, whether insects...

Albanese, V., Berardi, R., Llorente, M. et al. 2022. Mechanisms of expression of object play: A comparative study of stone handling in two captive groups of long-tailed macaques (Macaca fascicularis fascicularis). Behavioural Processes 203, 104774.

Stone handling (SH) is a form of solitary object play that is socially learned and culturally maintained. We studied two captive groups (Modena, N = 20; Padova, N = 20) of common long-tailed macaques housed...

Palacio, S., Adam, S., Bergeron, R. et al. 2022. Minor stall modifications and outdoor access can help improve dairy cow welfare in tie-stalls. Canadian Journal of Animal Science 103(1), 1–14.

Tie-stalls are the most confining method of housing for dairy cows and remain commonly used to house cows in many countries. Finding methods to improve animal welfare through housing modifications and alternative management strategies are...

Brando, S., Coe, J. 2022. Confronting back-of-house traditions: Primates as a case study. Journal of Zoological and Botanical Gardens 3(3), 366–397.

This review commentary focuses on traditional management practices and facility design with suggested improvements in non-public primate management areas, often called “back-of-house”, (henceforth BOH) in zoos, sanctuaries, and research facilities. Progress has been made toward...

Aigueperse, N., Vasseur, E. 2021. Providing an outdoor exercise area affects tie-stall cow reactivity and human-cow relations. Frontiers in Veterinary Science 7, 1172.

Confinement and restriction of movement are a reality for most dairy cows. Providing outdoor access is one method to increase movement opportunities. However, leading cows to an outdoor exercise area increases their exposure to manipulations...

Reipurth, M., Klausen, S. K., Denwood, M. et al. 2021. The effect of age when group housed and other management factors on playing and non-nutritive sucking behaviour in dairy calves: A cross sectional observational study. Acta Veterinaria Scandinavica 62, 63.

The aim of this study was to investigate if calves’ play behaviour and non-nutritive sucking behaviour, as indirect measures of welfare status, are associated with the age of the calf when group housed, age when...

Labuguen, R., Matsumoto, J., Negrete, S. B. et al. 2021. MacaquePose: A novel “in the wild” macaque monkey pose dataset for markerless motion capture. Frontiers in Behavioral Neuroscience 14, 581154.

Video-based markerless motion capture permits quantification of an animal's pose and motion, with a high spatiotemporal resolution in a naturalistic context, and is a powerful tool for analyzing the relationship between the animal's behaviors and...

Lee, C., Campbell, D. L. M. 2021. A multi-disciplinary approach to assess the welfare impacts of a new virtual fencing technology. Frontiers in Veterinary Science 8, 637709.

Virtual fencing involving the application of audio cues and electrical stimuli is being commercially developed for cattle. Virtual fencing has the potential to improve productivity through optimized pasture management and utilization by grazing animals. The...

Zigo, F., Vasil', M., Ondrašovičová, S. et al. 2021. Maintaining optimal mammary gland health and prevention of mastitis. Frontiers in Veterinary Science 8, 607311.

In dairy industry, quality of produced milk must be more important than quantity without a high somatic cells count (SCC) or pathogens causing mastitis of dairy cows and consumer diseases. Preserving the good health of...

Crump, A., Jenkins, K., Bethell, E. J. et al. 2021. Optimism and pasture access in dairy cows. Scientific Reports 11(1), 4882.

Allowing dairy cattle to access pasture can promote natural behaviour and improve their health. However, the psychological benefits are poorly understood. We compared a cognitive indicator of emotion in cattle either with or without pasture...

Lowe, G. L., Sutherland, M. A., Waas, J. R. et al. 2021. Effect of milk allowance on the suitability of automated behavioural and physiological measures as early disease indicators in calves. Applied Animal Behaviour Science 234, 105202.

This study investigated the effect of milk allowance on the suitability of behavioural and physiological responses, individually and in combination, as early disease indicators. A total of 120 heifer calves were assigned into a 5...

Bica, G. S., Pinheiro Machado Filho, L. C., Teixeira, D. L. 2021. Beef cattle on pasture have better performance when supplied with water trough than pond. Frontiers in Veterinary Science 8, 616904.

The behavior and performance of steers on pasture regarding water availability in troughs or in ponds were compared. Eight paddocks were randomly allocated to one treatment: POND (~30 m of diameter) or TROUGH (water trough...

Coleman, K., Shapiro, S. J. (Eds.). 2021. Behavioral Biology of Laboratory Animals (1st ed). CRC Press, Boca Raton, FL.

This 30-chapter volume informs students and professionals about the behavioral biology of animals commonly housed in laboratory and other captive settings. Each species evolved under specific environmental conditions, resulting in unique behavioral patterns, many of...

Cowl, V. B., Walker, S. L., Shultz, S. 2021. Reproductive males are effective at managing conflict in captive Sulawesi crested macaques (Macaca nigra). American Journal of Primatology 83(7), e23266.

Group size, density, and composition significantly influence the expression of agonism and, as demography is frequently manipulated in captivity, natural mechanisms of conflict management may be disrupted. Here, we examine how changes to the social...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Li, P., Cai, A., Descovich, K. et al. 2021. A comparison of rice husks and peanut shells as bedding materials on dairy cows’ preferences, behaviour, and health. Animals 11(7), 1887.

The provision and quality of bedding materials affect the behaviour, welfare, and health of dairy cows. The objective of this study was to evaluate the preference, behaviour, cleanliness, and physiological status of cows on three...

Sobte, H. F. M., Buijs, S. 2021. Impact of paper bedding on lying behaviour and welfare in lactating dairy cows. Applied Animal Behaviour Science 239, 105321.

Lying is a highly motivated behaviour in dairy cows. The level of comfort provided by the lying surface not only affects lying time, but can also affect several other aspects of welfare. We used a...

Arre, A. M., Horschler, D. J. 2021. Swimming and diving as social play in juvenile rhesus macaques (Macaca mulatta). Behaviour 158(6), 529-546.

Although play is ubiquitous throughout the animal kingdom, and in primates especially, the ultimate explanations and proximate mechanisms of play are not well understood. Previous research proposes that primate play may be important for the...

FELASA Working Group on Farm Animals: Berset, C. M., Caristo, M. E., Ferrara, F. et al. 2021. Federation of European Laboratory Animal Science Associations recommendations of best practices for the health management of ruminants and pigs used for scientific and educational purposes. Laboratory Animals 55(2), 117-128.

Most ruminants and pigs used for scientific and educational aims are bred not for these purposes but in a farm environment. Given the wide range of diseases that these species might have, ensuring that the...

Lemes, A. P., Garcia, A. R., Pezzopane, J. et al. 2021. Silvopastoral system is an alternative to improve animal welfare and productive performance in meat production systems. Scientific Reports 11(1), 14092.

Climate change is a reality and global surface temperature is projected to rise substantially in the next 80 years. Agriculture practices will have to adapt to climate change, and also help to mitigate this effect...

Zijlmans, D. G. M., Vernes, M. K., Sterck, E. H. M. et al. 2021. The utility of voluntary weighing in captive group-living rhesus macaques (Macaca mulatta). Animal Welfare 30(3), 249-258.

Bodyweight is an important health and welfare indicator for captive non-human primates (NHPs). Bodyweight can be measured during routine handling procedures, which cause stress. Alternatively, animals can be trained to step onto a scale, but...